RNA–Protein interactions for RNA: ENST00000601091.5

LIG1-220, Transcript of DNA ligase 1, humanhuman

TSL 5

Gene LIG1, Length 3,957 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIG1-220ENST00000601091 VPS26BQ4G0F5 336 aa10.29□□□□□ -0.76
LIG1-220ENST00000601091 NAPRTQ6XQN6 538 aa10.29□□□□□ -0.76
LIG1-220ENST00000601091 MACC1Q6ZN28 852 aa10.29□□□□□ -0.76
LIG1-220ENST00000601091 RNF180Q86T96 592 aa10.29□□□□□ -0.76
LIG1-220ENST00000601091 SLC9B2Q86UD5 537 aa10.29□□□□□ -0.76
LIG1-220ENST00000601091 AHI1Q8N157 1196 aa10.29□□□□□ -0.76
LIG1-220ENST00000601091 KHSRPQ92945 711 aaKnown RBP eCLIP10.29□□□□□ -0.76
LIG1-220ENST00000601091 ZNF778Q96MU6 729 aa10.29□□□□□ -0.76
LIG1-220ENST00000601091 ACOX2Q99424 681 aa10.29□□□□□ -0.76
LIG1-220ENST00000601091 NOL6Q9H6R4 1146 aaKnown RBP10.29□□□□□ -0.76
LIG1-220ENST00000601091 KIF17Q9P2E2 1029 aa10.29□□□□□ -0.76
LIG1-220ENST00000601091 PADI3Q9ULW8 664 aa10.29□□□□□ -0.76
LIG1-220ENST00000601091 PCDHB7Q9Y5E2 793 aa10.29□□□□□ -0.76
LIG1-220ENST00000601091 A8MT66 165 aa10.29□□□□□ -0.76
LIG1-220ENST00000601091 EVPLLA8MZ36 301 aa10.29□□□□□ -0.76
LIG1-220ENST00000601091 H3BSA7 217 aa10.29□□□□□ -0.76
LIG1-220ENST00000601091 GPR32O75388 356 aa10.29□□□□□ -0.76
LIG1-220ENST00000601091 TRIM16O95361 564 aa10.29□□□□□ -0.76
LIG1-220ENST00000601091 OR4Q2P0C623 313 aa10.29□□□□□ -0.76
LIG1-220ENST00000601091 CDH2P19022 906 aaPredicted RBP10.29□□□□□ -0.76
LIG1-220ENST00000601091 RPL10P27635 214 aaKnown RBP10.29□□□□□ -0.76
LIG1-220ENST00000601091 RECQLP46063 649 aaPredicted RBP10.29□□□□□ -0.76
LIG1-220ENST00000601091 GALNT3Q14435 633 aa10.29□□□□□ -0.76
LIG1-220ENST00000601091 NCF4Q15080 339 aa10.29□□□□□ -0.76
LIG1-220ENST00000601091 FAM189A2Q15884 450 aa10.29□□□□□ -0.76
LIG1-220ENST00000601091 ZBTB6Q15916 424 aa10.29□□□□□ -0.76
LIG1-220ENST00000601091 SCIMPQ6UWF3 145 aa10.29□□□□□ -0.76
LIG1-220ENST00000601091 CPA6Q8N4T0 437 aa10.29□□□□□ -0.76
LIG1-220ENST00000601091 C3orf58Q8NDZ4 430 aa10.29□□□□□ -0.76
LIG1-220ENST00000601091 COL26A1Q96A83 441 aa10.29□□□□□ -0.76
LIG1-220ENST00000601091 ROPN1LQ96C74 230 aa10.29□□□□□ -0.76
LIG1-220ENST00000601091 ZC3H10Q96K80 434 aaKnown RBP10.29□□□□□ -0.76
LIG1-220ENST00000601091 PKP2Q99959 881 aa10.29□□□□□ -0.76
LIG1-220ENST00000601091 COPS4Q9BT78 406 aa10.29□□□□□ -0.76
LIG1-220ENST00000601091 TINAGL1Q9GZM7 467 aaPredicted RBP10.29□□□□□ -0.76
LIG1-220ENST00000601091 GIMAP2Q9UG22 337 aa10.29□□□□□ -0.76
LIG1-220ENST00000601091 CAB39Q9Y376 341 aaPredicted RBP10.29□□□□□ -0.76
LIG1-220ENST00000601091 CENPFP49454 3210 aa10.28□□□□□ -0.76
LIG1-220ENST00000601091 G3V2L1 256 aa10.28□□□□□ -0.76
LIG1-220ENST00000601091 PRG2P13727 222 aa10.28□□□□□ -0.76
LIG1-220ENST00000601091 ITGA2P17301 1181 aa10.28□□□□□ -0.76
LIG1-220ENST00000601091 M6PRP20645 277 aa10.28□□□□□ -0.76
LIG1-220ENST00000601091 IMPDH1P20839 514 aa10.28□□□□□ -0.76
LIG1-220ENST00000601091 SLC7A1P30825 629 aa10.28□□□□□ -0.76
LIG1-220ENST00000601091 NDST2P52849 883 aa10.28□□□□□ -0.76
LIG1-220ENST00000601091 PCDH1Q08174 1060 aa10.28□□□□□ -0.76
LIG1-220ENST00000601091 NADK2Q4G0N4 442 aa10.28□□□□□ -0.76
LIG1-220ENST00000601091 PLEKHM3Q6ZWE6 761 aa10.28□□□□□ -0.76
LIG1-220ENST00000601091 SPPL2CQ8IUH8 684 aa10.28□□□□□ -0.76
LIG1-220ENST00000601091 ZNF248Q8NDW4 579 aa10.28□□□□□ -0.76
LIG1-220ENST00000601091 POC1BQ8TC44 478 aa10.28□□□□□ -0.76
LIG1-220ENST00000601091 MAPK15Q8TD08 544 aa10.28□□□□□ -0.76
LIG1-220ENST00000601091 TWIST2Q8WVJ9 160 aa10.28□□□□□ -0.76
LIG1-220ENST00000601091 CCDC120Q96HB5 630 aa10.28□□□□□ -0.76
LIG1-220ENST00000601091 DEPDC7Q96QD5 511 aa10.28□□□□□ -0.76
LIG1-220ENST00000601091 CDK5RAP1Q96SZ6 601 aaKnown RBP10.28□□□□□ -0.76
LIG1-220ENST00000601091 POLE3Q9NRF9 147 aa10.28□□□□□ -0.76
LIG1-220ENST00000601091 A0A1B0GTW7 788 aa10.28□□□□□ -0.76
LIG1-220ENST00000601091 E7ENX8 843 aa10.28□□□□□ -0.76
LIG1-220ENST00000601091 TSPAN6O43657 245 aa10.28□□□□□ -0.76
LIG1-220ENST00000601091 SNAP91O60641 907 aa10.28□□□□□ -0.76
LIG1-220ENST00000601091 RPP40O75818 363 aaKnown RBP10.28□□□□□ -0.76
LIG1-220ENST00000601091 MYO1DO94832 1006 aa10.28□□□□□ -0.76
LIG1-220ENST00000601091 MFN2O95140 757 aa10.28□□□□□ -0.76
LIG1-220ENST00000601091 CCNDBP1O95273 360 aa10.28□□□□□ -0.76
LIG1-220ENST00000601091 SLC35E2BP0CK96 405 aa10.28□□□□□ -0.76
LIG1-220ENST00000601091 FCGRTP55899 365 aa10.28□□□□□ -0.76
LIG1-220ENST00000601091 YBEYP58557 167 aaPredicted RBP10.28□□□□□ -0.76
LIG1-220ENST00000601091 TNK2Q07912 1038 aa10.28□□□□□ -0.76
LIG1-220ENST00000601091 NEDD8Q15843 81 aa10.28□□□□□ -0.76
LIG1-220ENST00000601091 AFTPHQ6ULP2 937 aa10.28□□□□□ -0.76
LIG1-220ENST00000601091 IL27RAQ6UWB1 636 aa10.28□□□□□ -0.76
LIG1-220ENST00000601091 ABRAXAS1Q6UWZ7 409 aa10.28□□□□□ -0.76
LIG1-220ENST00000601091 ZDHHC13Q8IUH4 622 aa10.28□□□□□ -0.76
LIG1-220ENST00000601091 TMEM126BQ8IUX1 230 aa10.28□□□□□ -0.76
LIG1-220ENST00000601091 ZNF276Q8N554 614 aa10.28□□□□□ -0.76
LIG1-220ENST00000601091 NPWQ8N729 165 aa10.28□□□□□ -0.76
LIG1-220ENST00000601091 ITFG1Q8TB96 612 aa10.28□□□□□ -0.76
LIG1-220ENST00000601091 ENKURQ8TC29 256 aa10.28□□□□□ -0.76
LIG1-220ENST00000601091 LRRC20Q8TCA0 184 aa10.28□□□□□ -0.76
LIG1-220ENST00000601091 MENTQ9BUN1 341 aa10.28□□□□□ -0.76
LIG1-220ENST00000601091 DPY30Q9C005 99 aa10.28□□□□□ -0.76
LIG1-220ENST00000601091 TRPM5Q9NZQ8 1165 aa10.28□□□□□ -0.76
LIG1-220ENST00000601091 TNPO3Q9Y5L0 923 aaKnown RBP10.28□□□□□ -0.76
LIG1-220ENST00000601091 THSD7AQ9UPZ6 1657 aa10.28□□□□□ -0.76
LIG1-220ENST00000601091 SLC9B1P1A6NJY1 282 aa10.28□□□□□ -0.76
LIG1-220ENST00000601091 H3BNX3 289 aa10.28□□□□□ -0.76
LIG1-220ENST00000601091 TRMUO75648 421 aaKnown RBP10.28□□□□□ -0.76
LIG1-220ENST00000601091 ESRRBO95718 433 aa10.28□□□□□ -0.76
LIG1-220ENST00000601091 CD1EP15812 388 aa10.28□□□□□ -0.76
LIG1-220ENST00000601091 PBX3P40426 434 aa10.28□□□□□ -0.76
LIG1-220ENST00000601091 TTPAP49638 278 aa10.28□□□□□ -0.76
LIG1-220ENST00000601091 RHOAP61586 193 aa10.28□□□□□ -0.76
LIG1-220ENST00000601091 PUDPQ08623 228 aa10.28□□□□□ -0.76
LIG1-220ENST00000601091 TRAF7Q6Q0C0 670 aa10.28□□□□□ -0.76
LIG1-220ENST00000601091 SH2D5Q6ZV89 423 aa10.28□□□□□ -0.76
LIG1-220ENST00000601091 KBTBD6Q86V97 674 aa10.28□□□□□ -0.76
LIG1-220ENST00000601091 CENPLQ8N0S6 344 aaPredicted RBP10.28□□□□□ -0.76
LIG1-220ENST00000601091 CDYL2Q8N8U2 506 aa10.28□□□□□ -0.76
LIG1-220ENST00000601091 GPR156Q8NFN8 814 aa10.28□□□□□ -0.76
Retrieved 100 of 20,778 RNA–protein pairs in 107.9 ms