RNA–Protein interactions for RNA: ENST00000529214.5

ATPAF1-209, Transcript of ATP synthase mitochondrial F1 complex assembly factor 1, humanhuman

TSL 2

Gene ATPAF1, Length 1,471 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATPAF1-209ENST00000529214 FAM107BQ9H098 131 aa6.21□□□□□ -1.42
ATPAF1-209ENST00000529214 FAM83DQ9H4H8 585 aa6.21□□□□□ -1.42
ATPAF1-209ENST00000529214 LRRC40Q9H9A6 602 aa6.21□□□□□ -1.42
ATPAF1-209ENST00000529214 RAD18Q9NS91 495 aa6.21□□□□□ -1.42
ATPAF1-209ENST00000529214 PKD2L2Q9NZM6 624 aa6.21□□□□□ -1.42
ATPAF1-209ENST00000529214 IL17CQ9P0M4 197 aa6.21□□□□□ -1.42
ATPAF1-209ENST00000529214 CD84Q9UIB8 345 aa6.21□□□□□ -1.42
ATPAF1-209ENST00000529214 ATPIF1Q9UII2 106 aa6.21□□□□□ -1.42
ATPAF1-209ENST00000529214 NEU2Q9Y3R4 380 aa6.21□□□□□ -1.42
ATPAF1-209ENST00000529214 OR1A2Q9Y585 309 aa6.21□□□□□ -1.42
ATPAF1-209ENST00000529214 ANKRD36A6QL64 1941 aa6.21□□□□□ -1.42
ATPAF1-209ENST00000529214 PCDH15Q96QU1 1955 aa6.21□□□□□ -1.42
ATPAF1-209ENST00000529214 DMXL1Q9Y485 3027 aa6.2□□□□□ -1.42
ATPAF1-209ENST00000529214 FAM186AA6NE01 2351 aa6.2□□□□□ -1.42
ATPAF1-209ENST00000529214 TMEM202A6NGA9 273 aa6.2□□□□□ -1.42
ATPAF1-209ENST00000529214 CACNB4O00305 520 aaPredicted RBP6.2□□□□□ -1.42
ATPAF1-209ENST00000529214 PDE2AO00408 941 aaPredicted RBP6.2□□□□□ -1.42
ATPAF1-209ENST00000529214 NDC80O14777 642 aa6.2□□□□□ -1.42
ATPAF1-209ENST00000529214 YKT6O15498 198 aa6.2□□□□□ -1.42
ATPAF1-209ENST00000529214 PHF2O75151 1096 aa6.2□□□□□ -1.42
ATPAF1-209ENST00000529214 SUN1O94901 812 aa6.2□□□□□ -1.42
ATPAF1-209ENST00000529214 SOD1P00441 154 aa6.2□□□□□ -1.42
ATPAF1-209ENST00000529214 FESP07332 822 aa6.2□□□□□ -1.42
ATPAF1-209ENST00000529214 NME1P15531 152 aaKnown RBP6.2□□□□□ -1.42
ATPAF1-209ENST00000529214 HTR1BP28222 390 aa6.2□□□□□ -1.42
ATPAF1-209ENST00000529214 PAFAH1B1P43034 410 aa6.2□□□□□ -1.42
ATPAF1-209ENST00000529214 GPR1P46091 355 aa6.2□□□□□ -1.42
ATPAF1-209ENST00000529214 FNTAP49354 379 aa6.2□□□□□ -1.42
ATPAF1-209ENST00000529214 INHBCP55103 352 aa6.2□□□□□ -1.42
ATPAF1-209ENST00000529214 KIAA1024LP59773 190 aa6.2□□□□□ -1.42
ATPAF1-209ENST00000529214 DCDC1P59894 354 aa6.2□□□□□ -1.42
ATPAF1-209ENST00000529214 HNRNPKP61978 463 aaKnown RBP eCLIP6.2□□□□□ -1.42
ATPAF1-209ENST00000529214 PHEXP78562 749 aa6.2□□□□□ -1.42
ATPAF1-209ENST00000529214 PUM1Q14671 1186 aaKnown RBP eCLIP6.2□□□□□ -1.42
ATPAF1-209ENST00000529214 NFATC4Q14934 902 aa6.2□□□□□ -1.42
ATPAF1-209ENST00000529214 TAF1AQ15573 450 aaPredicted RBP6.2□□□□□ -1.42
ATPAF1-209ENST00000529214 ZNF542PQ5EBM4 170 aa6.2□□□□□ -1.42
ATPAF1-209ENST00000529214 HENMT1Q5T8I9 393 aaKnown RBP6.2□□□□□ -1.42
ATPAF1-209ENST00000529214 RAET1GQ6H3X3 334 aa6.2□□□□□ -1.42
ATPAF1-209ENST00000529214 POMZP3Q6PJE2 187 aa6.2□□□□□ -1.42
ATPAF1-209ENST00000529214 ENPP7Q6UWV6 458 aa6.2□□□□□ -1.42
ATPAF1-209ENST00000529214 ANGPTL8Q6UXH0 198 aa6.2□□□□□ -1.42
ATPAF1-209ENST00000529214 MACC1Q6ZN28 852 aa6.2□□□□□ -1.42
ATPAF1-209ENST00000529214 USP51Q70EK9 711 aa6.2□□□□□ -1.42
ATPAF1-209ENST00000529214 KANSL1Q7Z3B3 1105 aa6.2□□□□□ -1.42
ATPAF1-209ENST00000529214 PIP4P1Q86T03 277 aa6.2□□□□□ -1.42
ATPAF1-209ENST00000529214 LINC00523Q86TU6 105 aa6.2□□□□□ -1.42
ATPAF1-209ENST00000529214 PARGQ86W56 976 aa6.2□□□□□ -1.42
ATPAF1-209ENST00000529214 FAM9CQ8IZT9 166 aa6.2□□□□□ -1.42
ATPAF1-209ENST00000529214 SLC25A45Q8N413 288 aa6.2□□□□□ -1.42
ATPAF1-209ENST00000529214 KDF1Q8NAX2 398 aaPredicted RBP6.2□□□□□ -1.42
ATPAF1-209ENST00000529214 BBOF1Q8ND07 529 aa6.2□□□□□ -1.42
ATPAF1-209ENST00000529214 DTX3LQ8TDB6 740 aa6.2□□□□□ -1.42
ATPAF1-209ENST00000529214 BLOC1S5Q8TDH9 187 aa6.2□□□□□ -1.42
ATPAF1-209ENST00000529214 TRPC4APQ8TEL6 797 aa6.2□□□□□ -1.42
ATPAF1-209ENST00000529214 CCT6BQ92526 530 aa6.2□□□□□ -1.42
ATPAF1-209ENST00000529214 GAL3ST3Q96A11 431 aa6.2□□□□□ -1.42
ATPAF1-209ENST00000529214 CAPZA3Q96KX2 299 aa6.2□□□□□ -1.42
ATPAF1-209ENST00000529214 CNTNAP3BQ96NU0 1288 aa6.2□□□□□ -1.42
ATPAF1-209ENST00000529214 C19orf43Q9BQ61 176 aa6.2□□□□□ -1.42
ATPAF1-209ENST00000529214 APOL2Q9BQE5 337 aa6.2□□□□□ -1.42
ATPAF1-209ENST00000529214 RIOK2Q9BVS4 552 aaKnown RBP6.2□□□□□ -1.42
ATPAF1-209ENST00000529214 PARD6BQ9BYG5 372 aa6.2□□□□□ -1.42
ATPAF1-209ENST00000529214 CNTNAP3Q9BZ76 1288 aa6.2□□□□□ -1.42
ATPAF1-209ENST00000529214 FOXP3Q9BZS1 431 aa6.2□□□□□ -1.42
ATPAF1-209ENST00000529214 BPIFA1Q9NP55 256 aa6.2□□□□□ -1.42
ATPAF1-209ENST00000529214 IGF2BP1Q9NZI8 577 aaKnown RBP eCLIP6.2□□□□□ -1.42
ATPAF1-209ENST00000529214 NFKBIL1Q9UBC1 381 aaPredicted RBP6.2□□□□□ -1.42
ATPAF1-209ENST00000529214 CNOT6Q9ULM6 557 aaKnown RBP6.2□□□□□ -1.42
ATPAF1-209ENST00000529214 PIEZO1Q92508 2521 aa6.19□□□□□ -1.42
ATPAF1-209ENST00000529214 GIMAP1-GIMAP5A0A087WTJ2 511 aa6.19□□□□□ -1.42
ATPAF1-209ENST00000529214 FADS2P1A8MWK0 482 aa6.19□□□□□ -1.42
ATPAF1-209ENST00000529214 E7EVH7 732 aa6.19□□□□□ -1.42
ATPAF1-209ENST00000529214 PLOD2O00469 737 aa6.19□□□□□ -1.42
ATPAF1-209ENST00000529214 TNFRSF10CO14798 259 aa6.19□□□□□ -1.42
ATPAF1-209ENST00000529214 STX7O15400 261 aaKnown RBP6.19□□□□□ -1.42
ATPAF1-209ENST00000529214 LDB2O43679 373 aa6.19□□□□□ -1.42
ATPAF1-209ENST00000529214 BUD23O43709 281 aaKnown RBP6.19□□□□□ -1.42
ATPAF1-209ENST00000529214 CBFA2T3O75081 653 aa6.19□□□□□ -1.42
ATPAF1-209ENST00000529214 PIAS2O75928 621 aa6.19□□□□□ -1.42
ATPAF1-209ENST00000529214 SNX4O95219 450 aa6.19□□□□□ -1.42
ATPAF1-209ENST00000529214 CRTAMO95727 393 aa6.19□□□□□ -1.42
ATPAF1-209ENST00000529214 TNFP01375 233 aa6.19□□□□□ -1.42
ATPAF1-209ENST00000529214 KRT14P02533 472 aa6.19□□□□□ -1.42
ATPAF1-209ENST00000529214 FUCA1P04066 466 aa6.19□□□□□ -1.42
ATPAF1-209ENST00000529214 TUBB4AP04350 444 aa6.19□□□□□ -1.42
ATPAF1-209ENST00000529214 CEACAM5P06731 702 aa6.19□□□□□ -1.42
ATPAF1-209ENST00000529214 APRTP07741 180 aa6.19□□□□□ -1.42
ATPAF1-209ENST00000529214 GIMD1P0DJR0 217 aa6.19□□□□□ -1.42
ATPAF1-209ENST00000529214 TPH1P17752 444 aa6.19□□□□□ -1.42
ATPAF1-209ENST00000529214 CSRP1P21291 193 aaKnown RBP6.19□□□□□ -1.42
ATPAF1-209ENST00000529214 KELP23276 732 aa6.19□□□□□ -1.42
ATPAF1-209ENST00000529214 DGKAP23743 735 aa6.19□□□□□ -1.42
ATPAF1-209ENST00000529214 EPHA8P29322 1005 aaPredicted RBP6.19□□□□□ -1.42
ATPAF1-209ENST00000529214 GRIA1P42261 906 aa6.19□□□□□ -1.42
ATPAF1-209ENST00000529214 BLKP51451 505 aa6.19□□□□□ -1.42
ATPAF1-209ENST00000529214 HK3P52790 923 aa6.19□□□□□ -1.42
ATPAF1-209ENST00000529214 PMS2P54278 862 aa6.19□□□□□ -1.42
ATPAF1-209ENST00000529214 CORO7P57737 925 aa6.19□□□□□ -1.42
ATPAF1-209ENST00000529214 C21orf58P58505 322 aa6.19□□□□□ -1.42
Retrieved 100 of 20,778 RNA–protein pairs in 22 ms