RNA–Protein interactions for RNA: ENST00000234256.3

SLC1A4-201, Transcript of solute carrier family 1 member 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SLC1A4, Length 4,561 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SLC1A4-201ENST00000234256 CTSEP14091 401 aa16.89■□□□□ 0.29
SLC1A4-201ENST00000234256 PPIBP23284 216 aaKnown RBP16.89■□□□□ 0.29
SLC1A4-201ENST00000234256 TLX1P31314 330 aaPredicted RBP16.89■□□□□ 0.29
SLC1A4-201ENST00000234256 RPL3P39023 403 aaKnown RBP16.89■□□□□ 0.29
SLC1A4-201ENST00000234256 HCAR3P49019 387 aa16.89■□□□□ 0.29
SLC1A4-201ENST00000234256 DIO3P55073 304 aa16.89■□□□□ 0.29
SLC1A4-201ENST00000234256 UFM1P61960 85 aa16.89■□□□□ 0.29
SLC1A4-201ENST00000234256 SLC9A5Q14940 896 aa16.89■□□□□ 0.29
SLC1A4-201ENST00000234256 SF1Q15637 639 aaKnown RBP16.89■□□□□ 0.29
SLC1A4-201ENST00000234256 PAAF1Q9BRP4 392 aa16.89■□□□□ 0.29
SLC1A4-201ENST00000234256 STRA6Q9BX79 667 aa16.89■□□□□ 0.29
SLC1A4-201ENST00000234256 EXD2Q9NVH0 621 aa16.89■□□□□ 0.29
SLC1A4-201ENST00000234256 SQORQ9Y6N5 450 aa16.89■□□□□ 0.29
SLC1A4-201ENST00000234256 ARPC2O15144 300 aa16.88■□□□□ 0.29
SLC1A4-201ENST00000234256 CHST9Q7L1S5 443 aa16.88■□□□□ 0.29
SLC1A4-201ENST00000234256 FAR1Q8WVX9 515 aa16.88■□□□□ 0.29
SLC1A4-201ENST00000234256 C16orf70Q9BSU1 422 aa16.88■□□□□ 0.29
SLC1A4-201ENST00000234256 LRRC3Q9BY71 257 aa16.88■□□□□ 0.29
SLC1A4-201ENST00000234256 MFSD1Q9H3U5 465 aa16.88■□□□□ 0.29
SLC1A4-201ENST00000234256 SUCOQ9UBS9 1254 aaKnown RBP16.88■□□□□ 0.29
SLC1A4-201ENST00000234256 BMP10O95393 424 aa16.88■□□□□ 0.29
SLC1A4-201ENST00000234256 PPM1AP35813 382 aa16.88■□□□□ 0.29
SLC1A4-201ENST00000234256 CSKP41240 450 aa16.88■□□□□ 0.29
SLC1A4-201ENST00000234256 CRHR2Q13324 411 aa16.88■□□□□ 0.29
SLC1A4-201ENST00000234256 SULT1C3Q6IMI6 304 aa16.88■□□□□ 0.29
SLC1A4-201ENST00000234256 HPS1Q92902 700 aa16.88■□□□□ 0.29
SLC1A4-201ENST00000234256 OLFM1Q99784 485 aa16.88■□□□□ 0.29
SLC1A4-201ENST00000234256 ZBTB26Q9HCK0 441 aa16.88■□□□□ 0.29
SLC1A4-201ENST00000234256 CORO2BQ9UQ03 480 aa16.88■□□□□ 0.29
SLC1A4-201ENST00000234256 PRKD3O94806 890 aa16.88■□□□□ 0.29
SLC1A4-201ENST00000234256 DIRAS1O95057 198 aa16.88■□□□□ 0.29
SLC1A4-201ENST00000234256 PRG2P13727 222 aa16.88■□□□□ 0.29
SLC1A4-201ENST00000234256 TMEM220Q6QAJ8 160 aa16.88■□□□□ 0.29
SLC1A4-201ENST00000234256 CHSY3Q70JA7 882 aa16.88■□□□□ 0.29
SLC1A4-201ENST00000234256 NPAS4Q8IUM7 802 aa16.88■□□□□ 0.29
SLC1A4-201ENST00000234256 Q96MT0 163 aa16.88■□□□□ 0.29
SLC1A4-201ENST00000234256 GSAPA4D1B5 854 aa16.87■□□□□ 0.29
SLC1A4-201ENST00000234256 K7EPI3 171 aa16.87■□□□□ 0.29
SLC1A4-201ENST00000234256 SNPHO15079 494 aa16.87■□□□□ 0.29
SLC1A4-201ENST00000234256 DGKEP52429 567 aa16.87■□□□□ 0.29
SLC1A4-201ENST00000234256 ZNF846Q147U1 533 aa16.87■□□□□ 0.29
SLC1A4-201ENST00000234256 ZBTB6Q15916 424 aa16.87■□□□□ 0.29
SLC1A4-201ENST00000234256 ADGRF1Q5T601 910 aa16.87■□□□□ 0.29
SLC1A4-201ENST00000234256 PDE12Q6L8Q7 609 aaKnown RBP16.87■□□□□ 0.29
SLC1A4-201ENST00000234256 TIFABQ6ZNK6 161 aa16.87■□□□□ 0.29
SLC1A4-201ENST00000234256 SMYD1Q8NB12 490 aa16.87■□□□□ 0.29
SLC1A4-201ENST00000234256 SUSD3Q96L08 255 aa16.87■□□□□ 0.29
SLC1A4-201ENST00000234256 ZNF607Q96SK3 696 aa16.87■□□□□ 0.29
SLC1A4-201ENST00000234256 NSUN3Q9H649 340 aaKnown RBP16.87■□□□□ 0.29
SLC1A4-201ENST00000234256 TRIM39Q9HCM9 518 aa16.87■□□□□ 0.29
SLC1A4-201ENST00000234256 OSER1Q9NX31 292 aa16.87■□□□□ 0.29
SLC1A4-201ENST00000234256 PTTG2Q9NZH5 202 aa16.87■□□□□ 0.29
SLC1A4-201ENST00000234256 NCKAP1Q9Y2A7 1128 aa16.87■□□□□ 0.29
SLC1A4-201ENST00000234256 TBC1D3DA0A087WVF3 549 aa16.87■□□□□ 0.29
SLC1A4-201ENST00000234256 TBC1D3IA0A087WXS9 549 aa16.87■□□□□ 0.29
SLC1A4-201ENST00000234256 TBC1D3EA0A087X179 549 aa16.87■□□□□ 0.29
SLC1A4-201ENST00000234256 TBC1D3KA0A087X1G2 549 aa16.87■□□□□ 0.29
SLC1A4-201ENST00000234256 TBC1D3FA6NER0 549 aaPredicted RBP16.87■□□□□ 0.29
SLC1A4-201ENST00000234256 TBC1D3LB9A6J9 549 aa16.87■□□□□ 0.29
SLC1A4-201ENST00000234256 PIRO00625 290 aa16.87■□□□□ 0.29
SLC1A4-201ENST00000234256 SCELO95171 688 aa16.87■□□□□ 0.29
SLC1A4-201ENST00000234256 FABP3P05413 133 aa16.87■□□□□ 0.29
SLC1A4-201ENST00000234256 TBC1D3HP0C7X1 549 aa16.87■□□□□ 0.29
SLC1A4-201ENST00000234256 NSG1P42857 185 aa16.87■□□□□ 0.29
SLC1A4-201ENST00000234256 ACLYP53396 1101 aa16.87■□□□□ 0.29
SLC1A4-201ENST00000234256 MXD1Q05195 221 aa16.87■□□□□ 0.29
SLC1A4-201ENST00000234256 SYT16Q17RD7 645 aa16.87■□□□□ 0.29
SLC1A4-201ENST00000234256 TBC1D3GQ6DHY5 549 aa16.87■□□□□ 0.29
SLC1A4-201ENST00000234256 TBC1D3CQ6IPX1 549 aa16.87■□□□□ 0.29
SLC1A4-201ENST00000234256 DNAJB7Q7Z6W7 309 aaPredicted RBP16.87■□□□□ 0.29
SLC1A4-201ENST00000234256 TBC1D3Q8IZP1 549 aaPredicted RBP16.87■□□□□ 0.29
SLC1A4-201ENST00000234256 OR8D1Q8WZ84 308 aa16.87■□□□□ 0.29
SLC1A4-201ENST00000234256 TIFAQ96CG3 184 aa16.87■□□□□ 0.29
SLC1A4-201ENST00000234256 SLC38A2Q96QD8 506 aa16.87■□□□□ 0.29
SLC1A4-201ENST00000234256 INTS10Q9NVR2 710 aaKnown RBP16.87■□□□□ 0.29
SLC1A4-201ENST00000234256 MYH13Q9UKX3 1938 aa16.87■□□□□ 0.29
SLC1A4-201ENST00000234256 A0A1W2PRU2 124 aa16.87■□□□□ 0.29
SLC1A4-201ENST00000234256 CBFA2T3O75081 653 aa16.87■□□□□ 0.29
SLC1A4-201ENST00000234256 RSL1D1O76021 490 aaKnown RBP16.87■□□□□ 0.29
SLC1A4-201ENST00000234256 COPZ1P61923 177 aa16.87■□□□□ 0.29
SLC1A4-201ENST00000234256 SFSWAPQ12872 951 aaKnown RBP16.87■□□□□ 0.29
SLC1A4-201ENST00000234256 PYDC2Q56P42 97 aa16.87■□□□□ 0.29
SLC1A4-201ENST00000234256 LOC110117498-PIK3R3F6TDL0 507 aa16.87■□□□□ 0.29
SLC1A4-201ENST00000234256 STX11O75558 287 aa16.87■□□□□ 0.29
SLC1A4-201ENST00000234256 POP4O95707 220 aaKnown RBP16.87■□□□□ 0.29
SLC1A4-201ENST00000234256 RPL4P36578 427 aaKnown RBP16.87■□□□□ 0.29
SLC1A4-201ENST00000234256 SLC26A3P40879 764 aa16.87■□□□□ 0.29
SLC1A4-201ENST00000234256 LAPTM5Q13571 262 aa16.87■□□□□ 0.29
SLC1A4-201ENST00000234256 EMC10Q5UCC4 262 aa16.87■□□□□ 0.29
SLC1A4-201ENST00000234256 HLA-DQA1Q5Y7H0 255 aa16.87■□□□□ 0.29
SLC1A4-201ENST00000234256 BHLHB9Q6PI77 547 aa16.87■□□□□ 0.29
SLC1A4-201ENST00000234256 CHST15Q7LFX5 561 aaPredicted RBP16.87■□□□□ 0.29
SLC1A4-201ENST00000234256 GPRIN1Q7Z2K8 1008 aa16.87■□□□□ 0.29
SLC1A4-201ENST00000234256 TTC29Q8NA56 475 aaPredicted RBP16.87■□□□□ 0.29
SLC1A4-201ENST00000234256 ST13P5Q8NFI4 369 aaPredicted RBP16.87■□□□□ 0.29
SLC1A4-201ENST00000234256 C1QTNF7Q9BXJ2 289 aa16.87■□□□□ 0.29
SLC1A4-201ENST00000234256 TXLNGYQ9BZA5 131 aa16.87■□□□□ 0.29
SLC1A4-201ENST00000234256 CRNNQ9UBG3 495 aaPredicted RBP16.87■□□□□ 0.29
SLC1A4-201ENST00000234256 DNAJB4Q9UDY4 337 aa16.87■□□□□ 0.29
SLC1A4-201ENST00000234256 OR10H1Q9Y4A9 318 aa16.87■□□□□ 0.29
Retrieved 100 of 20,778 RNA–protein pairs in 39 ms