RNA–Protein interactions for RNA: ENSMUST00000108530.1

Nup88-202, Transcript of Nuclear pore complex protein Nup88, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Nup88, Length 2,389 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Nup88-202ENSMUST00000108530 Ntsr2P70310 416 aa14.55□□□□□ -0.08
Nup88-202ENSMUST00000108530 Zfyve27Q3TXX3 415 aa14.55□□□□□ -0.08
Nup88-202ENSMUST00000108530 Lcp2Q60787 533 aaKnown RBP14.55□□□□□ -0.08
Nup88-202ENSMUST00000108530 Magee1Q6PCZ4 918 aaKnown RBP14.55□□□□□ -0.08
Nup88-202ENSMUST00000108530 Olfr1152Q7TR34 310 aa14.55□□□□□ -0.08
Nup88-202ENSMUST00000108530 4930503B20RikQ80ZP0 234 aa14.55□□□□□ -0.08
Nup88-202ENSMUST00000108530 Wbp1lQ8BGW2 348 aa14.55□□□□□ -0.08
Nup88-202ENSMUST00000108530 Q8BWQ6 963 aa14.55□□□□□ -0.08
Nup88-202ENSMUST00000108530 Fam161aQ8QZV6 448 aa14.55□□□□□ -0.08
Nup88-202ENSMUST00000108530 Vmn1r185Q8R299 319 aa14.55□□□□□ -0.08
Nup88-202ENSMUST00000108530 Cdkal1Q91WE6 578 aa14.55□□□□□ -0.08
Nup88-202ENSMUST00000108530 Tmem150aQ91WN2 271 aa14.55□□□□□ -0.08
Nup88-202ENSMUST00000108530 Coro6Q920M5 471 aa14.55□□□□□ -0.08
Nup88-202ENSMUST00000108530 Mrpl1Q99N96 336 aaKnown RBP14.55□□□□□ -0.08
Nup88-202ENSMUST00000108530 Tex46Q9CPU3 165 aa14.55□□□□□ -0.08
Nup88-202ENSMUST00000108530 Ccdc81Q9D5W4 654 aa14.55□□□□□ -0.08
Nup88-202ENSMUST00000108530 SrpraQ9DBG7 636 aaKnown RBP14.55□□□□□ -0.08
Nup88-202ENSMUST00000108530 Fam13cQ9DBR2 601 aa14.55□□□□□ -0.08
Nup88-202ENSMUST00000108530 Dmap1Q9JI44 468 aa14.55□□□□□ -0.08
Nup88-202ENSMUST00000108530 4921501E09RikA0A0R4J054 908 aa14.54□□□□□ -0.08
Nup88-202ENSMUST00000108530 Fam71f2B2RXB0 297 aa14.54□□□□□ -0.08
Nup88-202ENSMUST00000108530 Apol11bE9PUZ0 337 aa14.54□□□□□ -0.08
Nup88-202ENSMUST00000108530 Vmn2r65G3X931 845 aa14.54□□□□□ -0.08
Nup88-202ENSMUST00000108530 Zfp14P10755 501 aa14.54□□□□□ -0.08
Nup88-202ENSMUST00000108530 RapsnP12672 412 aa14.54□□□□□ -0.08
Nup88-202ENSMUST00000108530 Ccng1P51945 294 aa14.54□□□□□ -0.08
Nup88-202ENSMUST00000108530 ThraP63058 492 aa14.54□□□□□ -0.08
Nup88-202ENSMUST00000108530 NficP70255 439 aa14.54□□□□□ -0.08
Nup88-202ENSMUST00000108530 Sox9Q04887 507 aa14.54□□□□□ -0.08
Nup88-202ENSMUST00000108530 Q14AM7 275 aa14.54□□□□□ -0.08
Nup88-202ENSMUST00000108530 9930111J21Rik1Q5SVP0 844 aa14.54□□□□□ -0.08
Nup88-202ENSMUST00000108530 Bpifb1Q61114 474 aa14.54□□□□□ -0.08
Nup88-202ENSMUST00000108530 Dna2Q6ZQJ5 1062 aa14.54□□□□□ -0.08
Nup88-202ENSMUST00000108530 Scn4bQ7M729 228 aa14.54□□□□□ -0.08
Nup88-202ENSMUST00000108530 Clec18aQ7TSQ1 534 aa14.54□□□□□ -0.08
Nup88-202ENSMUST00000108530 Dnajc6Q80TZ3 938 aa14.54□□□□□ -0.08
Nup88-202ENSMUST00000108530 Wwp1Q8BZZ3 918 aa14.54□□□□□ -0.08
Nup88-202ENSMUST00000108530 Slc5a11Q8K0E3 673 aa14.54□□□□□ -0.08
Nup88-202ENSMUST00000108530 Dclre1cQ8K4J0 705 aa14.54□□□□□ -0.08
Nup88-202ENSMUST00000108530 Gsg1Q8R1W2 324 aa14.54□□□□□ -0.08
Nup88-202ENSMUST00000108530 Camk1gQ91VB2 477 aa14.54□□□□□ -0.08
Nup88-202ENSMUST00000108530 Cldnd1Q9CQX5 253 aa14.54□□□□□ -0.08
Nup88-202ENSMUST00000108530 Gsdmdc1Q9D8T2 487 aa14.54□□□□□ -0.08
Nup88-202ENSMUST00000108530 TcimQ9D915 106 aa14.54□□□□□ -0.08
Nup88-202ENSMUST00000108530 Slamf1Q9QUM4 343 aa14.54□□□□□ -0.08
Nup88-202ENSMUST00000108530 Cst9Q9Z0H6 137 aa14.54□□□□□ -0.08
Nup88-202ENSMUST00000108530 Speer3W4VSP1 261 aa14.54□□□□□ -0.08
Nup88-202ENSMUST00000108530 Tmem236A2ARJ3 344 aa14.54□□□□□ -0.08
Nup88-202ENSMUST00000108530 FanceB8JJD6 213 aa14.54□□□□□ -0.08
Nup88-202ENSMUST00000108530 Cbx4O55187 551 aa14.54□□□□□ -0.08
Nup88-202ENSMUST00000108530 Mkln1O89050 735 aa14.54□□□□□ -0.08
Nup88-202ENSMUST00000108530 P04213 122 aa14.54□□□□□ -0.08
Nup88-202ENSMUST00000108530 Serpina3kP07759 418 aa14.54□□□□□ -0.08
Nup88-202ENSMUST00000108530 Etv2P41163 335 aa14.54□□□□□ -0.08
Nup88-202ENSMUST00000108530 Slc10a2P70172 348 aa14.54□□□□□ -0.08
Nup88-202ENSMUST00000108530 Sox4Q06831 440 aa14.54□□□□□ -0.08
Nup88-202ENSMUST00000108530 Zfp791Q497V9 528 aa14.54□□□□□ -0.08
Nup88-202ENSMUST00000108530 Ephx4Q6IE26 359 aa14.54□□□□□ -0.08
Nup88-202ENSMUST00000108530 Sarm1Q6PDS3 724 aa14.54□□□□□ -0.08
Nup88-202ENSMUST00000108530 Tbx10Q810F8 385 aa14.54□□□□□ -0.08
Nup88-202ENSMUST00000108530 FicdQ8BIX9 458 aa14.54□□□□□ -0.08
Nup88-202ENSMUST00000108530 Acbd3Q8BMP6 525 aa14.54□□□□□ -0.08
Nup88-202ENSMUST00000108530 Pex5lQ8C437 567 aa14.54□□□□□ -0.08
Nup88-202ENSMUST00000108530 Mettl22Q8R1C6 393 aa14.54□□□□□ -0.08
Nup88-202ENSMUST00000108530 Golga7Q91W53 137 aa14.54□□□□□ -0.08
Nup88-202ENSMUST00000108530 Lypd3Q91YK8 363 aa14.54□□□□□ -0.08
Nup88-202ENSMUST00000108530 Fndc8Q9D2H8 321 aa14.54□□□□□ -0.08
Nup88-202ENSMUST00000108530 FancgQ9EQR6 623 aa14.54□□□□□ -0.08
Nup88-202ENSMUST00000108530 Alkal1J3QPP8 127 aa14.53□□□□□ -0.08
Nup88-202ENSMUST00000108530 Vmn2r2L7N2E9 908 aa14.53□□□□□ -0.08
Nup88-202ENSMUST00000108530 Vmn2r8L7N472 848 aa14.53□□□□□ -0.08
Nup88-202ENSMUST00000108530 Kpna3O35344 521 aa14.53□□□□□ -0.08
Nup88-202ENSMUST00000108530 Nthl1O35980 300 aa14.53□□□□□ -0.08
Nup88-202ENSMUST00000108530 Atp1b2P14231 290 aa14.53□□□□□ -0.08
Nup88-202ENSMUST00000108530 Gja4P28235 333 aa14.53□□□□□ -0.08
Nup88-202ENSMUST00000108530 Cdk18Q04899 451 aa14.53□□□□□ -0.08
Nup88-202ENSMUST00000108530 Tgm3Q08189 693 aa14.53□□□□□ -0.08
Nup88-202ENSMUST00000108530 Q32M26 199 aa14.53□□□□□ -0.08
Nup88-202ENSMUST00000108530 Foxk2Q3UCQ1 651 aa14.53□□□□□ -0.08
Nup88-202ENSMUST00000108530 ChfrQ810L3 664 aa14.53□□□□□ -0.08
Nup88-202ENSMUST00000108530 Gpr26Q8BZA7 337 aa14.53□□□□□ -0.08
Nup88-202ENSMUST00000108530 Acat2Q8CAY6 397 aa14.53□□□□□ -0.08
Nup88-202ENSMUST00000108530 Nudt4Q8R2U6 179 aa14.53□□□□□ -0.08
Nup88-202ENSMUST00000108530 Cmtm8Q9CZR4 173 aa14.53□□□□□ -0.08
Nup88-202ENSMUST00000108530 A0A1Y7VP24 259 aa14.53□□□□□ -0.08
Nup88-202ENSMUST00000108530 Vmn1r3A2AMT7 306 aa14.53□□□□□ -0.08
Nup88-202ENSMUST00000108530 Fbrsl1E9Q9T0 1031 aa14.53□□□□□ -0.08
Nup88-202ENSMUST00000108530 Tex16F6WNY1 1150 aa14.53□□□□□ -0.08
Nup88-202ENSMUST00000108530 Cyp8b1O88962 500 aa14.53□□□□□ -0.08
Nup88-202ENSMUST00000108530 Hnrnpa1P49312 320 aaKnown RBP14.53□□□□□ -0.08
Nup88-202ENSMUST00000108530 Inpp1P49442 396 aa14.53□□□□□ -0.08
Nup88-202ENSMUST00000108530 Arl1P61211 181 aa14.53□□□□□ -0.08
Nup88-202ENSMUST00000108530 Q3KNL4 93 aa14.53□□□□□ -0.08
Nup88-202ENSMUST00000108530 Med26Q7TN02 588 aa14.53□□□□□ -0.08
Nup88-202ENSMUST00000108530 Cnpy4Q8BQ47 245 aa14.53□□□□□ -0.08
Nup88-202ENSMUST00000108530 Trmt10aQ8C1Z8 328 aaKnown RBP14.53□□□□□ -0.08
Nup88-202ENSMUST00000108530 Vmn1r79Q8R285 306 aa14.53□□□□□ -0.08
Nup88-202ENSMUST00000108530 Gjd3Q91YD1 278 aa14.53□□□□□ -0.08
Nup88-202ENSMUST00000108530 Glod5Q9D8I3 148 aa14.53□□□□□ -0.08
Nup88-202ENSMUST00000108530 Tor1bQ9ER41 336 aa14.53□□□□□ -0.08
Retrieved 100 of 22,080 RNA–protein pairs in 33.1 ms