RNA–Protein interactions for RNA: ENST00000594298.5

SHKBP1-203, Transcript of SH3KBP1 binding protein 1, humanhuman

TSL 3

Gene SHKBP1, Length 716 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHKBP1-203ENST00000594298 GLT6D1Q7Z4J2 308 aa17.19■□□□□ 0.34
SHKBP1-203ENST00000594298 C11orf96Q7Z7L8 435 aa17.19■□□□□ 0.34
SHKBP1-203ENST00000594298 KLHDC8BQ8IXV7 354 aa17.19■□□□□ 0.34
SHKBP1-203ENST00000594298 SLC35F6Q8N357 371 aa17.19■□□□□ 0.34
SHKBP1-203ENST00000594298 RSC1A1Q92681 617 aa17.19■□□□□ 0.34
SHKBP1-203ENST00000594298 SEMA5BQ9P283 1151 aa17.19■□□□□ 0.34
SHKBP1-203ENST00000594298 TMPRSS11EQ9UL52 423 aa17.19■□□□□ 0.34
SHKBP1-203ENST00000594298 POLHQ9Y253 713 aa17.19■□□□□ 0.34
SHKBP1-203ENST00000594298 TP53TG5Q9Y2B4 290 aa17.19■□□□□ 0.34
SHKBP1-203ENST00000594298 PKP3Q9Y446 797 aa17.19■□□□□ 0.34
SHKBP1-203ENST00000594298 OR52A4PA6NMU1 304 aa17.18■□□□□ 0.34
SHKBP1-203ENST00000594298 ERI2A8K979 691 aaKnown RBP17.18■□□□□ 0.34
SHKBP1-203ENST00000594298 MKRN2OSH3BPM6 223 aa17.18■□□□□ 0.34
SHKBP1-203ENST00000594298 KCNJ13O60928 360 aa17.18■□□□□ 0.34
SHKBP1-203ENST00000594298 SPAG6O75602 509 aa17.18■□□□□ 0.34
SHKBP1-203ENST00000594298 CRTAMO95727 393 aa17.18■□□□□ 0.34
SHKBP1-203ENST00000594298 MT-ND3P03897 115 aa17.18■□□□□ 0.34
SHKBP1-203ENST00000594298 VCLP18206 1134 aa17.18■□□□□ 0.34
SHKBP1-203ENST00000594298 NELFEP18615 380 aaKnown RBP17.18■□□□□ 0.34
SHKBP1-203ENST00000594298 RPL10P27635 214 aaKnown RBP17.18■□□□□ 0.34
SHKBP1-203ENST00000594298 GDF10P55107 478 aa17.18■□□□□ 0.34
SHKBP1-203ENST00000594298 CACHD1Q5VU97 1274 aa17.18■□□□□ 0.34
SHKBP1-203ENST00000594298 GSTA5Q7RTV2 222 aa17.18■□□□□ 0.34
SHKBP1-203ENST00000594298 LINC00523Q86TU6 105 aa17.18■□□□□ 0.34
SHKBP1-203ENST00000594298 PPP1R3BQ86XI6 285 aa17.18■□□□□ 0.34
SHKBP1-203ENST00000594298 RASGRP3Q8IV61 690 aa17.18■□□□□ 0.34
SHKBP1-203ENST00000594298 RASGEF1CQ8N431 466 aa17.18■□□□□ 0.34
SHKBP1-203ENST00000594298 DTX3LQ8TDB6 740 aa17.18■□□□□ 0.34
SHKBP1-203ENST00000594298 BRSK1Q8TDC3 778 aa17.18■□□□□ 0.34
SHKBP1-203ENST00000594298 CXorf40BQ96DE9 158 aa17.18■□□□□ 0.34
SHKBP1-203ENST00000594298 GORASP1Q9BQQ3 440 aa17.18■□□□□ 0.34
SHKBP1-203ENST00000594298 ARNT2Q9HBZ2 717 aa17.18■□□□□ 0.34
SHKBP1-203ENST00000594298 PAK5Q9P286 719 aa17.18■□□□□ 0.34
SHKBP1-203ENST00000594298 TTC7AQ9ULT0 858 aaPredicted RBP17.18■□□□□ 0.34
SHKBP1-203ENST00000594298 E7EVH7 732 aa17.17■□□□□ 0.34
SHKBP1-203ENST00000594298 AURKAO14965 403 aa17.17■□□□□ 0.34
SHKBP1-203ENST00000594298 STX7O15400 261 aaKnown RBP17.17■□□□□ 0.34
SHKBP1-203ENST00000594298 KIF1CO43896 1103 aaKnown RBP17.17■□□□□ 0.34
SHKBP1-203ENST00000594298 METTL18O95568 372 aa17.17■□□□□ 0.34
SHKBP1-203ENST00000594298 FURINP09958 794 aa17.17■□□□□ 0.34
SHKBP1-203ENST00000594298 CCNYL3P0C7X3 344 aa17.17■□□□□ 0.34
SHKBP1-203ENST00000594298 CD97P48960 835 aa17.17■□□□□ 0.34
SHKBP1-203ENST00000594298 LMAN1P49257 510 aa17.17■□□□□ 0.34
SHKBP1-203ENST00000594298 DRG2P55039 364 aaKnown RBP17.17■□□□□ 0.34
SHKBP1-203ENST00000594298 TMEM115Q12893 351 aaPredicted RBP17.17■□□□□ 0.34
SHKBP1-203ENST00000594298 ERV3-1Q14264 604 aa17.17■□□□□ 0.34
SHKBP1-203ENST00000594298 SIX1Q15475 284 aaPredicted RBP17.17■□□□□ 0.34
SHKBP1-203ENST00000594298 TAF1AQ15573 450 aaPredicted RBP17.17■□□□□ 0.34
SHKBP1-203ENST00000594298 TTC30BQ8N4P2 665 aa17.17■□□□□ 0.34
SHKBP1-203ENST00000594298 MIB2Q96AX9 1013 aa17.17■□□□□ 0.34
SHKBP1-203ENST00000594298 SLC41A2Q96JW4 573 aa17.17■□□□□ 0.34
SHKBP1-203ENST00000594298 FCRL4Q96PJ5 515 aa17.17■□□□□ 0.34
SHKBP1-203ENST00000594298 IL17CQ9P0M4 197 aa17.17■□□□□ 0.34
SHKBP1-203ENST00000594298 PADI1Q9ULC6 663 aa17.17■□□□□ 0.34
SHKBP1-203ENST00000594298 WDR37Q9Y2I8 494 aa17.17■□□□□ 0.34
SHKBP1-203ENST00000594298 PTPN13Q12923 2485 aa17.16■□□□□ 0.34
SHKBP1-203ENST00000594298 C21orf140B9A014 251 aa17.16■□□□□ 0.34
SHKBP1-203ENST00000594298 CES2O00748 559 aa17.16■□□□□ 0.34
SHKBP1-203ENST00000594298 KATNA1O75449 491 aa17.16■□□□□ 0.34
SHKBP1-203ENST00000594298 CREG1O75629 220 aa17.16■□□□□ 0.34
SHKBP1-203ENST00000594298 AP2A1O95782 977 aa17.16■□□□□ 0.34
SHKBP1-203ENST00000594298 GAS8O95995 478 aa17.16■□□□□ 0.34
SHKBP1-203ENST00000594298 LPOP22079 712 aaPredicted RBP17.16■□□□□ 0.34
SHKBP1-203ENST00000594298 SPAM1P38567 509 aa17.16■□□□□ 0.34
SHKBP1-203ENST00000594298 PMS2P54278 862 aa17.16■□□□□ 0.34
SHKBP1-203ENST00000594298 DMPKQ09013 629 aa17.16■□□□□ 0.34
SHKBP1-203ENST00000594298 GTF2H3Q13889 308 aa17.16■□□□□ 0.34
SHKBP1-203ENST00000594298 ATP13A5Q4VNC0 1218 aa17.16■□□□□ 0.34
SHKBP1-203ENST00000594298 KCTD11Q693B1 232 aa17.16■□□□□ 0.34
SHKBP1-203ENST00000594298 FAM92BQ6ZTR7 304 aa17.16■□□□□ 0.34
SHKBP1-203ENST00000594298 BPHLQ86WA6 291 aaPredicted RBP17.16■□□□□ 0.34
SHKBP1-203ENST00000594298 TRAPPC5Q8IUR0 188 aa17.16■□□□□ 0.34
SHKBP1-203ENST00000594298 APLFQ8IW19 511 aaPredicted RBP17.16■□□□□ 0.34
SHKBP1-203ENST00000594298 FAM26EQ8N5C1 309 aa17.16■□□□□ 0.34
SHKBP1-203ENST00000594298 UBXN4Q92575 508 aa17.16■□□□□ 0.34
SHKBP1-203ENST00000594298 ELMO2Q96JJ3 720 aa17.16■□□□□ 0.34
SHKBP1-203ENST00000594298 C19orf43Q9BQ61 176 aa17.16■□□□□ 0.34
SHKBP1-203ENST00000594298 APOL2Q9BQE5 337 aa17.16■□□□□ 0.34
SHKBP1-203ENST00000594298 BPIFA1Q9NP55 256 aa17.16■□□□□ 0.34
SHKBP1-203ENST00000594298 LHX9Q9NQ69 397 aa17.16■□□□□ 0.34
SHKBP1-203ENST00000594298 LNPEPQ9UIQ6 1025 aa17.16■□□□□ 0.34
SHKBP1-203ENST00000594298 PLAAQ9Y263 795 aa17.16■□□□□ 0.34
SHKBP1-203ENST00000594298 RELNP78509 3460 aa17.16■□□□□ 0.34
SHKBP1-203ENST00000594298 K7EM74 188 aa17.15■□□□□ 0.34
SHKBP1-203ENST00000594298 PGRMC1O00264 195 aaKnown RBP17.15■□□□□ 0.34
SHKBP1-203ENST00000594298 RFPL1O75677 317 aa17.15■□□□□ 0.34
SHKBP1-203ENST00000594298 NTRK1P04629 796 aa17.15■□□□□ 0.34
SHKBP1-203ENST00000594298 GP1BBP13224 206 aa17.15■□□□□ 0.34
SHKBP1-203ENST00000594298 HALP42357 657 aa17.15■□□□□ 0.34
SHKBP1-203ENST00000594298 GNG11P61952 73 aa17.15■□□□□ 0.34
SHKBP1-203ENST00000594298 DNASE1L3Q13609 305 aa17.15■□□□□ 0.34
SHKBP1-203ENST00000594298 SPARCL1Q14515 664 aa17.15■□□□□ 0.34
SHKBP1-203ENST00000594298 IRGCQ6NXR0 463 aa17.15■□□□□ 0.34
SHKBP1-203ENST00000594298 TEX19Q8NA77 164 aa17.15■□□□□ 0.34
SHKBP1-203ENST00000594298 SEC14L1Q92503 715 aa17.15■□□□□ 0.34
SHKBP1-203ENST00000594298 OSBPL9Q96SU4 736 aa17.15■□□□□ 0.34
SHKBP1-203ENST00000594298 ETNK1Q9HBU6 452 aa17.15■□□□□ 0.34
SHKBP1-203ENST00000594298 PDE7BQ9NP56 450 aa17.15■□□□□ 0.34
SHKBP1-203ENST00000594298 IL26Q9NPH9 171 aa17.15■□□□□ 0.34
SHKBP1-203ENST00000594298 SNX12Q9UMY4 172 aa17.15■□□□□ 0.34
Retrieved 100 of 20,778 RNA–protein pairs in 72.1 ms