RNA–Protein interactions for RNA: ENST00000514313.1

NUP54-215, Transcript of nucleoporin 54, humanhuman

TSL 2

Gene NUP54, Length 537 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUP54-215ENST00000514313 ATL1Q8WXF7 558 aa7.13□□□□□ -1.27
NUP54-215ENST00000514313 ERO1AQ96HE7 468 aa7.13□□□□□ -1.27
NUP54-215ENST00000514313 KRTAP4-9Q9BYQ8 210 aa7.13□□□□□ -1.27
NUP54-215ENST00000514313 DPP3Q9NY33 737 aa7.13□□□□□ -1.27
NUP54-215ENST00000514313 TRIM64A6NGJ6 449 aa7.12□□□□□ -1.27
NUP54-215ENST00000514313 TRIM64BA6NI03 449 aa7.12□□□□□ -1.27
NUP54-215ENST00000514313 DNM1LO00429 736 aa7.12□□□□□ -1.27
NUP54-215ENST00000514313 STX6O43752 255 aa7.12□□□□□ -1.27
NUP54-215ENST00000514313 FMO6PO60774 539 aa7.12□□□□□ -1.27
NUP54-215ENST00000514313 FAM58BPP0C7Q3 252 aa7.12□□□□□ -1.27
NUP54-215ENST00000514313 ADRA2CP18825 462 aa7.12□□□□□ -1.27
NUP54-215ENST00000514313 CASTP20810 708 aaKnown RBP7.12□□□□□ -1.27
NUP54-215ENST00000514313 RUNX1T1Q06455 604 aa7.12□□□□□ -1.27
NUP54-215ENST00000514313 PLA2G7Q13093 441 aa7.12□□□□□ -1.27
NUP54-215ENST00000514313 TRAF3Q13114 568 aa7.12□□□□□ -1.27
NUP54-215ENST00000514313 TDRD12Q587J7 1177 aaKnown RBP7.12□□□□□ -1.27
NUP54-215ENST00000514313 XKR9Q5GH70 373 aa7.12□□□□□ -1.27
NUP54-215ENST00000514313 GCNT6Q5T4J0 391 aa7.12□□□□□ -1.27
NUP54-215ENST00000514313 C8orf82Q6P1X6 216 aaPredicted RBP7.12□□□□□ -1.27
NUP54-215ENST00000514313 MSANTD1Q6ZTZ1 278 aa7.12□□□□□ -1.27
NUP54-215ENST00000514313 TLK2Q86UE8 772 aa7.12□□□□□ -1.27
NUP54-215ENST00000514313 FJX1Q86VR8 437 aa7.12□□□□□ -1.27
NUP54-215ENST00000514313 CEP57L1Q8IYX8 460 aa7.12□□□□□ -1.27
NUP54-215ENST00000514313 PGBD5Q8N414 524 aa7.12□□□□□ -1.27
NUP54-215ENST00000514313 SPATA22Q8NHS9 363 aa7.12□□□□□ -1.27
NUP54-215ENST00000514313 SMPDL3BQ92485 455 aa7.12□□□□□ -1.27
NUP54-215ENST00000514313 PIGTQ969N2 578 aa7.12□□□□□ -1.27
NUP54-215ENST00000514313 OTUB1Q96FW1 271 aaPredicted RBP7.12□□□□□ -1.27
NUP54-215ENST00000514313 C3orf30Q96M34 536 aa7.12□□□□□ -1.27
NUP54-215ENST00000514313 MLPHQ9BV36 600 aaPredicted RBP7.12□□□□□ -1.27
NUP54-215ENST00000514313 MRPL9Q9BYD2 267 aaKnown RBP7.12□□□□□ -1.27
NUP54-215ENST00000514313 MYNNQ9NPC7 610 aa7.12□□□□□ -1.27
NUP54-215ENST00000514313 ELOVL5Q9NYP7 299 aa7.12□□□□□ -1.27
NUP54-215ENST00000514313 NPAP1Q9NZP6 1156 aa7.12□□□□□ -1.27
NUP54-215ENST00000514313 PRAG1Q86YV5 1406 aa7.11□□□□□ -1.27
NUP54-215ENST00000514313 RPGRIP1LQ68CZ1 1315 aa7.11□□□□□ -1.27
NUP54-215ENST00000514313 SMTNL1A8MU46 457 aa7.11□□□□□ -1.27
NUP54-215ENST00000514313 FAM86B1E9PN63 330 aa7.11□□□□□ -1.27
NUP54-215ENST00000514313 PPEF2O14830 753 aa7.11□□□□□ -1.27
NUP54-215ENST00000514313 FAM86B2P0C5J1 330 aa7.11□□□□□ -1.27
NUP54-215ENST00000514313 EEF1B2P24534 225 aaKnown RBP7.11□□□□□ -1.27
NUP54-215ENST00000514313 CDC25CP30307 473 aa7.11□□□□□ -1.27
NUP54-215ENST00000514313 RRS1Q15050 365 aaKnown RBP7.11□□□□□ -1.27
NUP54-215ENST00000514313 MEP1BQ16820 701 aa7.11□□□□□ -1.27
NUP54-215ENST00000514313 FAM91A1Q658Y4 838 aa7.11□□□□□ -1.27
NUP54-215ENST00000514313 SYCE2Q6PIF2 218 aa7.11□□□□□ -1.27
NUP54-215ENST00000514313 TMPRSS11FQ6ZWK6 438 aa7.11□□□□□ -1.27
NUP54-215ENST00000514313 TECPR1Q7Z6L1 1165 aa7.11□□□□□ -1.27
NUP54-215ENST00000514313 FAM219AQ8IW50 185 aa7.11□□□□□ -1.27
NUP54-215ENST00000514313 ASB5Q8WWX0 329 aa7.11□□□□□ -1.27
NUP54-215ENST00000514313 PTP4A1Q93096 173 aa7.11□□□□□ -1.27
NUP54-215ENST00000514313 SFXN2Q96NB2 322 aa7.11□□□□□ -1.27
NUP54-215ENST00000514313 PADI2Q9Y2J8 665 aa7.11□□□□□ -1.27
NUP54-215ENST00000514313 AMDHD2Q9Y303 409 aa7.11□□□□□ -1.27
NUP54-215ENST00000514313 GRIP1Q9Y3R0 1128 aa7.11□□□□□ -1.27
NUP54-215ENST00000514313 IGSF1Q8N6C5 1336 aa7.1□□□□□ -1.27
NUP54-215ENST00000514313 A0A1W2PPQ1 181 aa7.1□□□□□ -1.27
NUP54-215ENST00000514313 WDR91A4D1P6 747 aa7.1□□□□□ -1.27
NUP54-215ENST00000514313 OR5K3A6NET4 321 aa7.1□□□□□ -1.27
NUP54-215ENST00000514313 CLDN4O14493 209 aa7.1□□□□□ -1.27
NUP54-215ENST00000514313 MID1O15344 667 aa7.1□□□□□ -1.27
NUP54-215ENST00000514313 KDM4BO94953 1096 aa7.1□□□□□ -1.27
NUP54-215ENST00000514313 GCNT3O95395 438 aa7.1□□□□□ -1.27
NUP54-215ENST00000514313 CLDN14O95500 239 aa7.1□□□□□ -1.27
NUP54-215ENST00000514313 ACSL3O95573 720 aa7.1□□□□□ -1.27
NUP54-215ENST00000514313 SP100P23497 879 aaPredicted RBP7.1□□□□□ -1.27
NUP54-215ENST00000514313 MPZP25189 248 aa7.1□□□□□ -1.27
NUP54-215ENST00000514313 TKTP29401 623 aaKnown RBP7.1□□□□□ -1.27
NUP54-215ENST00000514313 ABCG1P45844 678 aa7.1□□□□□ -1.27
NUP54-215ENST00000514313 AMPHP49418 695 aa7.1□□□□□ -1.27
NUP54-215ENST00000514313 INHBEP58166 350 aa7.1□□□□□ -1.27
NUP54-215ENST00000514313 PNRC1Q12796 327 aaPredicted RBP7.1□□□□□ -1.27
NUP54-215ENST00000514313 IYDQ6PHW0 289 aa7.1□□□□□ -1.27
NUP54-215ENST00000514313 MOXD1Q6UVY6 613 aa7.1□□□□□ -1.27
NUP54-215ENST00000514313 RAD9BQ6WBX8 426 aa7.1□□□□□ -1.27
NUP54-215ENST00000514313 C11orf57Q6ZUT1 292 aaPredicted RBP7.1□□□□□ -1.27
NUP54-215ENST00000514313 DSG4Q86SJ6 1040 aa7.1□□□□□ -1.27
NUP54-215ENST00000514313 C1orf87Q8N0U7 546 aa7.1□□□□□ -1.27
NUP54-215ENST00000514313 NAT8LQ8N9F0 302 aa7.1□□□□□ -1.27
NUP54-215ENST00000514313 MOSPD2Q8NHP6 518 aa7.1□□□□□ -1.27
NUP54-215ENST00000514313 GRAPLQ8TC17 118 aaPredicted RBP7.1□□□□□ -1.27
NUP54-215ENST00000514313 MTBPQ96DY7 904 aa7.1□□□□□ -1.27
NUP54-215ENST00000514313 CPNE1Q99829 537 aa7.1□□□□□ -1.27
NUP54-215ENST00000514313 FUT8Q9BYC5 575 aa7.1□□□□□ -1.27
NUP54-215ENST00000514313 MMADHCQ9H3L0 296 aaPredicted RBP7.1□□□□□ -1.27
NUP54-215ENST00000514313 CWC25Q9NXE8 425 aaPredicted RBP7.1□□□□□ -1.27
NUP54-215ENST00000514313 POLLQ9UGP5 575 aa7.1□□□□□ -1.27
NUP54-215ENST00000514313 IGLV5-52A0A0A0MRZ9 124 aa7.09□□□□□ -1.27
NUP54-215ENST00000514313 H3BNX3 289 aa7.09□□□□□ -1.27
NUP54-215ENST00000514313 KCNJ13O60928 360 aa7.09□□□□□ -1.27
NUP54-215ENST00000514313 TOMM40O96008 361 aa7.09□□□□□ -1.27
NUP54-215ENST00000514313 TGFB3P10600 412 aa7.09□□□□□ -1.27
NUP54-215ENST00000514313 MYOD1P15172 320 aa7.09□□□□□ -1.27
NUP54-215ENST00000514313 TMPOP42166 694 aaKnown RBP7.09□□□□□ -1.27
NUP54-215ENST00000514313 HMGA2P52926 109 aa7.09□□□□□ -1.27
NUP54-215ENST00000514313 NAGLUP54802 743 aa7.09□□□□□ -1.27
NUP54-215ENST00000514313 ISL1P61371 349 aa7.09□□□□□ -1.27
NUP54-215ENST00000514313 ZNF155Q12901 538 aaPredicted RBP7.09□□□□□ -1.27
NUP54-215ENST00000514313 PRR27Q6MZM9 219 aa7.09□□□□□ -1.27
NUP54-215ENST00000514313 SPATA21Q7Z572 469 aa7.09□□□□□ -1.27
Retrieved 100 of 20,778 RNA–protein pairs in 55.4 ms