RNA–Protein interactions for RNA: ENST00000507257.5

NUP54-205, Transcript of nucleoporin 54, humanhuman

TSL 5

Gene NUP54, Length 1,938 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUP54-205ENST00000507257 UGT2B10P36537 528 aa17.5■□□□□ 0.39
NUP54-205ENST00000507257 CLCA4Q14CN2 919 aa17.5■□□□□ 0.39
NUP54-205ENST00000507257 KIAA0040Q15053 153 aa17.5■□□□□ 0.39
NUP54-205ENST00000507257 ATAD3BQ5T9A4 648 aa17.5■□□□□ 0.39
NUP54-205ENST00000507257 SPESP1Q6UW49 350 aa17.5■□□□□ 0.39
NUP54-205ENST00000507257 ENPP6Q6UWR7 440 aa17.5■□□□□ 0.39
NUP54-205ENST00000507257 MMAAQ8IVH4 418 aaKnown RBP17.5■□□□□ 0.39
NUP54-205ENST00000507257 FAM86B1Q8N7N1 296 aa17.5■□□□□ 0.39
NUP54-205ENST00000507257 ARRDC4Q8NCT1 418 aa17.5■□□□□ 0.39
NUP54-205ENST00000507257 CCDC90BQ9GZT6 254 aa17.5■□□□□ 0.39
NUP54-205ENST00000507257 KATNBL1Q9H079 304 aa17.5■□□□□ 0.39
NUP54-205ENST00000507257 MMP27Q9H306 513 aa17.5■□□□□ 0.39
NUP54-205ENST00000507257 CSADQ9Y600 493 aa17.5■□□□□ 0.39
NUP54-205ENST00000507257 MBLAC1A4D2B0 266 aaPredicted RBP17.49■□□□□ 0.39
NUP54-205ENST00000507257 GSTA4O15217 222 aa17.49■□□□□ 0.39
NUP54-205ENST00000507257 HS6ST1O60243 411 aa17.49■□□□□ 0.39
NUP54-205ENST00000507257 PTTG1O95997 202 aa17.49■□□□□ 0.39
NUP54-205ENST00000507257 MMP3P08254 477 aa17.49■□□□□ 0.39
NUP54-205ENST00000507257 IST1P53990 364 aa17.49■□□□□ 0.39
NUP54-205ENST00000507257 HUNKP57058 714 aa17.49■□□□□ 0.39
NUP54-205ENST00000507257 SEMA3AQ14563 771 aa17.49■□□□□ 0.39
NUP54-205ENST00000507257 IHHQ14623 411 aa17.49■□□□□ 0.39
NUP54-205ENST00000507257 SMU1Q2TAY7 513 aa17.49■□□□□ 0.39
NUP54-205ENST00000507257 PLEKHG6Q3KR16 790 aa17.49■□□□□ 0.39
NUP54-205ENST00000507257 SETMARQ53H47 684 aaPredicted RBP17.49■□□□□ 0.39
NUP54-205ENST00000507257 CAPN13Q6MZZ7 669 aaPredicted RBP17.49■□□□□ 0.39
NUP54-205ENST00000507257 GPR149Q86SP6 731 aa17.49■□□□□ 0.39
NUP54-205ENST00000507257 LYSMD2Q8IV50 215 aa17.49■□□□□ 0.39
NUP54-205ENST00000507257 ARRDC2Q8TBH0 407 aa17.49■□□□□ 0.39
NUP54-205ENST00000507257 KAT8Q9H7Z6 458 aaKnown RBP17.49■□□□□ 0.39
NUP54-205ENST00000507257 PARVBQ9HBI1 364 aa17.49■□□□□ 0.39
NUP54-205ENST00000507257 LTB4R2Q9NPC1 389 aa17.49■□□□□ 0.39
NUP54-205ENST00000507257 SCN3BQ9NY72 215 aa17.49■□□□□ 0.39
NUP54-205ENST00000507257 IGF2BP1Q9NZI8 577 aaKnown RBP eCLIP17.49■□□□□ 0.393e-6■■■■□ 20.6
NUP54-205ENST00000507257 KLQ9UEF7 1012 aa17.49■□□□□ 0.39
NUP54-205ENST00000507257 POU2F3Q9UKI9 436 aa17.49■□□□□ 0.39
NUP54-205ENST00000507257 GJA3Q9Y6H8 435 aa17.49■□□□□ 0.39
NUP54-205ENST00000507257 CCL22O00626 93 aa17.49■□□□□ 0.39
NUP54-205ENST00000507257 PRMT5O14744 637 aaPredicted RBP17.49■□□□□ 0.39
NUP54-205ENST00000507257 VBP1P61758 197 aa17.49■□□□□ 0.39
NUP54-205ENST00000507257 DSC2Q02487 901 aa17.49■□□□□ 0.39
NUP54-205ENST00000507257 TSNQ15631 228 aaKnown RBP17.49■□□□□ 0.39
NUP54-205ENST00000507257 NPTX1Q15818 432 aa17.49■□□□□ 0.39
NUP54-205ENST00000507257 ZNF792Q3KQV3 632 aa17.49■□□□□ 0.39
NUP54-205ENST00000507257 MSANTD2Q6P1R3 559 aa17.49■□□□□ 0.39
NUP54-205ENST00000507257 PAQR3Q6TCH7 311 aa17.49■□□□□ 0.39
NUP54-205ENST00000507257 CYP20A1Q6UW02 462 aa17.49■□□□□ 0.39
NUP54-205ENST00000507257 SNX29P2Q8IUI4 249 aa17.49■□□□□ 0.39
NUP54-205ENST00000507257 SLC7A5P1Q8MH63 180 aa17.49■□□□□ 0.39
NUP54-205ENST00000507257 OR4L1Q8NH43 312 aa17.49■□□□□ 0.39
NUP54-205ENST00000507257 FBXO30Q8TB52 745 aa17.49■□□□□ 0.39
NUP54-205ENST00000507257 BRSK1Q8TDC3 778 aa17.49■□□□□ 0.39
NUP54-205ENST00000507257 FIG4Q92562 907 aa17.49■□□□□ 0.39
NUP54-205ENST00000507257 MYLPFQ96A32 169 aa17.49■□□□□ 0.39
NUP54-205ENST00000507257 AGO3Q9H9G7 860 aaKnown RBP17.49■□□□□ 0.39
NUP54-205ENST00000507257 DCAF13Q9NV06 445 aaKnown RBP17.49■□□□□ 0.39
NUP54-205ENST00000507257 UXTQ9UBK9 157 aaPredicted RBP17.49■□□□□ 0.39
NUP54-205ENST00000507257 LIMD1Q9UGP4 676 aa17.49■□□□□ 0.39
NUP54-205ENST00000507257 ZNF229Q9UJW7 825 aa17.49■□□□□ 0.39
NUP54-205ENST00000507257 MED16Q9Y2X0 877 aa17.49■□□□□ 0.39
NUP54-205ENST00000507257 DOCK4Q8N1I0 1966 aa17.48■□□□□ 0.39
NUP54-205ENST00000507257 ELOVL7A1L3X0 281 aa17.48■□□□□ 0.39
NUP54-205ENST00000507257 RFPL2O75678 378 aa17.48■□□□□ 0.39
NUP54-205ENST00000507257 RHOBTB1O94844 696 aa17.48■□□□□ 0.39
NUP54-205ENST00000507257 BAG6P46379 1132 aa17.48■□□□□ 0.39
NUP54-205ENST00000507257 MLLT6P55198 1093 aaPredicted RBP17.48■□□□□ 0.39
NUP54-205ENST00000507257 KRR1Q13601 381 aaKnown RBP17.48■□□□□ 0.39
NUP54-205ENST00000507257 FAM171BQ6P995 826 aa17.48■□□□□ 0.39
NUP54-205ENST00000507257 SHQ1Q6PI26 577 aaKnown RBP17.48■□□□□ 0.39
NUP54-205ENST00000507257 B3GNT8Q7Z7M8 397 aa17.48■□□□□ 0.39
NUP54-205ENST00000507257 LGALS12Q96DT0 336 aa17.48■□□□□ 0.39
NUP54-205ENST00000507257 C17orf80Q9BSJ5 609 aa17.48■□□□□ 0.39
NUP54-205ENST00000507257 ALOXE3Q9BYJ1 711 aa17.48■□□□□ 0.39
NUP54-205ENST00000507257 KCTD3Q9Y597 815 aa17.48■□□□□ 0.39
NUP54-205ENST00000507257 CXCR6O00574 342 aa17.47■□□□□ 0.39
NUP54-205ENST00000507257 E2F3O00716 465 aa17.47■□□□□ 0.39
NUP54-205ENST00000507257 DYRK3O43781 588 aa17.47■□□□□ 0.39
NUP54-205ENST00000507257 PSMA3P25788 255 aa17.47■□□□□ 0.39
NUP54-205ENST00000507257 IL5RAQ01344 420 aa17.47■□□□□ 0.39
NUP54-205ENST00000507257 CYP4F3Q08477 520 aa17.47■□□□□ 0.39
NUP54-205ENST00000507257 SLC10A7Q0GE19 358 aa17.47■□□□□ 0.39
NUP54-205ENST00000507257 RAPSNQ13702 412 aa17.47■□□□□ 0.39
NUP54-205ENST00000507257 RBBP7Q16576 425 aa17.47■□□□□ 0.39
NUP54-205ENST00000507257 RNF165Q6ZSG1 346 aa17.47■□□□□ 0.39
NUP54-205ENST00000507257 CHPFQ8IZ52 775 aa17.47■□□□□ 0.39
NUP54-205ENST00000507257 HS3ST5Q8IZT8 346 aa17.47■□□□□ 0.39
NUP54-205ENST00000507257 DNAJB8Q8NHS0 232 aa17.47■□□□□ 0.39
NUP54-205ENST00000507257 TRPM4Q8TD43 1214 aa17.47■□□□□ 0.39
NUP54-205ENST00000507257 SLC13A3Q8WWT9 602 aa17.47■□□□□ 0.39
NUP54-205ENST00000507257 SIGLEC11Q96RL6 698 aa17.47■□□□□ 0.39
NUP54-205ENST00000507257 ACOX2Q99424 681 aa17.47■□□□□ 0.39
NUP54-205ENST00000507257 VAPAQ9P0L0 249 aa17.47■□□□□ 0.39
NUP54-205ENST00000507257 ERVK-18Q9QC07 812 aa17.47■□□□□ 0.39
NUP54-205ENST00000507257 HECAQ9UBI9 543 aaPredicted RBP17.47■□□□□ 0.39
NUP54-205ENST00000507257 IKZF3Q9UKT9 509 aa17.47■□□□□ 0.39
NUP54-205ENST00000507257 HS3ST4Q9Y661 456 aa17.47■□□□□ 0.39
NUP54-205ENST00000507257 MOXD2PA6NHM9 499 aa17.47■□□□□ 0.39
NUP54-205ENST00000507257 H0Y626 953 aa17.47■□□□□ 0.39
NUP54-205ENST00000507257 LSM1O15116 133 aaKnown RBP17.47■□□□□ 0.39
NUP54-205ENST00000507257 XPNPEP2O43895 674 aa17.47■□□□□ 0.39
Retrieved 100 of 20,778 RNA–protein pairs in 116.6 ms