RNA–Protein interactions for RNA: ENST00000545894.1

DDB1-224, Transcript of damage specific DNA binding protein 1, humanhuman

TSL 2

Gene DDB1, Length 2,282 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDB1-224ENST00000545894 XKR7Q5GH72 579 aa11.34□□□□□ -0.59
DDB1-224ENST00000545894 PIK3R6Q5UE93 754 aa11.34□□□□□ -0.59
DDB1-224ENST00000545894 TMEM214Q6NUQ4 689 aaKnown RBP11.34□□□□□ -0.59
DDB1-224ENST00000545894 SCD5Q86SK9 330 aa11.34□□□□□ -0.59
DDB1-224ENST00000545894 RIMKLAQ8IXN7 391 aa11.34□□□□□ -0.59
DDB1-224ENST00000545894 TEX26Q8N6G2 289 aa11.34□□□□□ -0.59
DDB1-224ENST00000545894 ARRDC2Q8TBH0 407 aa11.34□□□□□ -0.59
DDB1-224ENST00000545894 RAB2BQ8WUD1 216 aa11.34□□□□□ -0.59
DDB1-224ENST00000545894 SNX19Q92543 992 aa11.34□□□□□ -0.59
DDB1-224ENST00000545894 NSMCE2Q96MF7 247 aa11.34□□□□□ -0.59
DDB1-224ENST00000545894 SAMD11Q96NU1 681 aa11.34□□□□□ -0.59
DDB1-224ENST00000545894 SERPINB11Q96P15 392 aa11.34□□□□□ -0.59
DDB1-224ENST00000545894 TDRD1Q9BXT4 1180 aaKnown RBP11.34□□□□□ -0.59
DDB1-224ENST00000545894 LRRC3Q9BY71 257 aa11.34□□□□□ -0.59
DDB1-224ENST00000545894 TLR9Q9NR96 1032 aa11.34□□□□□ -0.59
DDB1-224ENST00000545894 CATSPERZQ9NTU4 200 aa11.34□□□□□ -0.59
DDB1-224ENST00000545894 INTS7Q9NVH2 962 aaKnown RBP11.34□□□□□ -0.59
DDB1-224ENST00000545894 IGF2BP1Q9NZI8 577 aaKnown RBP eCLIP11.34□□□□□ -0.59
DDB1-224ENST00000545894 SLAMF8Q9P0V8 285 aa11.34□□□□□ -0.59
DDB1-224ENST00000545894 MAGEL2Q9UJ55 1249 aa11.34□□□□□ -0.59
DDB1-224ENST00000545894 PCDHB8Q9UN66 801 aa11.34□□□□□ -0.59
DDB1-224ENST00000545894 USP22Q9UPT9 525 aa11.34□□□□□ -0.59
DDB1-224ENST00000545894 EPOPA6NHQ4 379 aa11.33□□□□□ -0.6
DDB1-224ENST00000545894 J3QRK9 145 aa11.33□□□□□ -0.6
DDB1-224ENST00000545894 K7EPI3 171 aa11.33□□□□□ -0.6
DDB1-224ENST00000545894 B4GAT1O43505 415 aa11.33□□□□□ -0.6
DDB1-224ENST00000545894 SNX2O60749 519 aa11.33□□□□□ -0.6
DDB1-224ENST00000545894 ABCB7O75027 752 aa11.33□□□□□ -0.6
DDB1-224ENST00000545894 TULP3O75386 442 aa11.33□□□□□ -0.6
DDB1-224ENST00000545894 FUCA1P04066 466 aa11.33□□□□□ -0.6
DDB1-224ENST00000545894 RB1P06400 928 aa11.33□□□□□ -0.6
DDB1-224ENST00000545894 RHOQP17081 205 aa11.33□□□□□ -0.6
DDB1-224ENST00000545894 CES1P23141 567 aa11.33□□□□□ -0.6
DDB1-224ENST00000545894 SHMT2P34897 504 aa11.33□□□□□ -0.6
DDB1-224ENST00000545894 BCAP31P51572 246 aa11.33□□□□□ -0.6
DDB1-224ENST00000545894 DAG1Q14118 895 aa11.33□□□□□ -0.6
DDB1-224ENST00000545894 PTPRCAPQ14761 206 aa11.33□□□□□ -0.6
DDB1-224ENST00000545894 NR1D2Q14995 579 aa11.33□□□□□ -0.6
DDB1-224ENST00000545894 ZIK1Q3SY52 487 aaPredicted RBP11.33□□□□□ -0.6
DDB1-224ENST00000545894 GLYATQ6IB77 296 aa11.33□□□□□ -0.6
DDB1-224ENST00000545894 MSANTD2Q6P1R3 559 aa11.33□□□□□ -0.6
DDB1-224ENST00000545894 LRRTM3Q86VH5 581 aa11.33□□□□□ -0.6
DDB1-224ENST00000545894 SLC15A4Q8N697 577 aa11.33□□□□□ -0.6
DDB1-224ENST00000545894 FBXO22Q8NEZ5 403 aa11.33□□□□□ -0.6
DDB1-224ENST00000545894 SPPL3Q8TCT6 385 aa11.33□□□□□ -0.6
DDB1-224ENST00000545894 BLOC1S5Q8TDH9 187 aa11.33□□□□□ -0.6
DDB1-224ENST00000545894 PSMG2Q969U7 264 aa11.33□□□□□ -0.6
DDB1-224ENST00000545894 FBXL8Q96CD0 374 aa11.33□□□□□ -0.6
DDB1-224ENST00000545894 MAGED4Q96JG8 741 aa11.33□□□□□ -0.6
DDB1-224ENST00000545894 TMEM209Q96SK2 561 aa11.33□□□□□ -0.6
DDB1-224ENST00000545894 DERL2Q9GZP9 239 aa11.33□□□□□ -0.6
DDB1-224ENST00000545894 PIF1Q9H611 641 aa11.33□□□□□ -0.6
DDB1-224ENST00000545894 GPN2Q9H9Y4 310 aaPredicted RBP11.33□□□□□ -0.6
DDB1-224ENST00000545894 NTN4Q9HB63 628 aa11.33□□□□□ -0.6
DDB1-224ENST00000545894 PFDN4Q9NQP4 134 aa11.33□□□□□ -0.6
DDB1-224ENST00000545894 ZIM2Q9NZV7 527 aa11.33□□□□□ -0.6
DDB1-224ENST00000545894 PSME2Q9UL46 239 aa11.33□□□□□ -0.6
DDB1-224ENST00000545894 DOLKQ9UPQ8 538 aa11.33□□□□□ -0.6
DDB1-224ENST00000545894 PCDHB3Q9Y5E6 796 aa11.33□□□□□ -0.6
DDB1-224ENST00000545894 ARL5AQ9Y689 179 aa11.33□□□□□ -0.6
DDB1-224ENST00000545894 KIAA1671Q9BY89 1806 aa11.33□□□□□ -0.6
DDB1-224ENST00000545894 GBF1Q92538 1859 aa11.33□□□□□ -0.6
DDB1-224ENST00000545894 FAM234BA2RU67 622 aa11.33□□□□□ -0.6
DDB1-224ENST00000545894 TMEM221A6NGB7 291 aa11.33□□□□□ -0.6
DDB1-224ENST00000545894 SYCE1LA8MT33 242 aa11.33□□□□□ -0.6
DDB1-224ENST00000545894 CFAP99D6REC4 459 aa11.33□□□□□ -0.6
DDB1-224ENST00000545894 SOX1O00570 391 aaPredicted RBP11.33□□□□□ -0.6
DDB1-224ENST00000545894 GRM6O15303 877 aa11.33□□□□□ -0.6
DDB1-224ENST00000545894 DEAF1O75398 565 aaPredicted RBP11.33□□□□□ -0.6
DDB1-224ENST00000545894 ECI2O75521 394 aa11.33□□□□□ -0.6
DDB1-224ENST00000545894 SULT1C4O75897 302 aa11.33□□□□□ -0.6
DDB1-224ENST00000545894 RHOBTB1O94844 696 aa11.33□□□□□ -0.6
DDB1-224ENST00000545894 SOD2P04179 222 aa11.33□□□□□ -0.6
DDB1-224ENST00000545894 UROSP10746 265 aa11.33□□□□□ -0.6
DDB1-224ENST00000545894 THRBP10828 461 aa11.33□□□□□ -0.6
DDB1-224ENST00000545894 STC1P52823 247 aa11.33□□□□□ -0.6
DDB1-224ENST00000545894 OR4D2P58180 307 aa11.33□□□□□ -0.6
DDB1-224ENST00000545894 ERVK-8P63133 956 aa11.33□□□□□ -0.6
DDB1-224ENST00000545894 ATP1A4Q13733 1029 aa11.33□□□□□ -0.6
DDB1-224ENST00000545894 MAPRE1Q15691 268 aaKnown RBP11.33□□□□□ -0.6
DDB1-224ENST00000545894 RTP2Q5QGT7 225 aa11.33□□□□□ -0.6
DDB1-224ENST00000545894 RBM48Q5RL73 367 aaKnown RBP11.33□□□□□ -0.6
DDB1-224ENST00000545894 XAF1Q6GPH4 301 aa11.33□□□□□ -0.6
DDB1-224ENST00000545894 GALNT18Q6P9A2 607 aa11.33□□□□□ -0.6
DDB1-224ENST00000545894 SYVN1Q86TM6 617 aa11.33□□□□□ -0.6
DDB1-224ENST00000545894 ITIH5Q86UX2 942 aa11.33□□□□□ -0.6
DDB1-224ENST00000545894 HID1Q8IV36 788 aa11.33□□□□□ -0.6
DDB1-224ENST00000545894 PGBD5Q8N414 524 aa11.33□□□□□ -0.6
DDB1-224ENST00000545894 OR10T2Q8NGX3 314 aa11.33□□□□□ -0.6
DDB1-224ENST00000545894 OR4L1Q8NH43 312 aa11.33□□□□□ -0.6
DDB1-224ENST00000545894 HERC2P3Q9BVR0 1158 aa11.33□□□□□ -0.6
DDB1-224ENST00000545894 ZYG11BQ9C0D3 744 aa11.33□□□□□ -0.6
DDB1-224ENST00000545894 NMUR1Q9HB89 426 aa11.33□□□□□ -0.6
DDB1-224ENST00000545894 TMEM45AQ9NWC5 275 aa11.33□□□□□ -0.6
DDB1-224ENST00000545894 SELENONQ9NZV5 590 aa11.33□□□□□ -0.6
DDB1-224ENST00000545894 SEPT3Q9UH03 358 aa11.33□□□□□ -0.6
DDB1-224ENST00000545894 BLOC1S6Q9UL45 172 aa11.33□□□□□ -0.6
DDB1-224ENST00000545894 B3GNT3Q9Y2A9 372 aa11.33□□□□□ -0.6
DDB1-224ENST00000545894 PDE4DIPQ5VU43 2346 aa11.33□□□□□ -0.6
DDB1-224ENST00000545894 CHD9Q3L8U1 2897 aa11.32□□□□□ -0.6
Retrieved 100 of 20,778 RNA–protein pairs in 48.2 ms