RNA–Protein interactions for RNA: ENST00000494836.2

YIF1A-209, Transcript of Yip1 interacting factor homolog A, membrane trafficking protein, humanhuman

TSL 2

Gene YIF1A, Length 540 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
YIF1A-209ENST00000494836 XRCC1P18887 633 aaPredicted RBP15.92■□□□□ 0.14
YIF1A-209ENST00000494836 ARCN1P48444 511 aaKnown RBP15.92■□□□□ 0.14
YIF1A-209ENST00000494836 OR1D5P58170 312 aa15.92■□□□□ 0.14
YIF1A-209ENST00000494836 UBE2IP63279 158 aaKnown RBP15.92■□□□□ 0.14
YIF1A-209ENST00000494836 CALCOCO2Q13137 446 aa15.92■□□□□ 0.14
YIF1A-209ENST00000494836 TARDBPQ13148 414 aaKnown RBP eCLIP15.92■□□□□ 0.14
YIF1A-209ENST00000494836 TUBB2AQ13885 445 aa15.92■□□□□ 0.14
YIF1A-209ENST00000494836 HIF1AQ16665 826 aa15.92■□□□□ 0.14
YIF1A-209ENST00000494836 BBS9Q3SYG4 887 aa15.92■□□□□ 0.14
YIF1A-209ENST00000494836 SDCCAG8Q86SQ7 713 aaPredicted RBP15.92■□□□□ 0.14
YIF1A-209ENST00000494836 ZNF761Q86XN6 746 aaPredicted RBP15.92■□□□□ 0.14
YIF1A-209ENST00000494836 MARCH9Q86YJ5 346 aa15.92■□□□□ 0.14
YIF1A-209ENST00000494836 CFAP206Q8IYR0 622 aa15.92■□□□□ 0.14
YIF1A-209ENST00000494836 CXorf40BQ96DE9 158 aa15.92■□□□□ 0.14
YIF1A-209ENST00000494836 FCRL3Q96P31 734 aaPredicted RBP15.92■□□□□ 0.14
YIF1A-209ENST00000494836 NAT9Q9BTE0 207 aa15.92■□□□□ 0.14
YIF1A-209ENST00000494836 TUBB2BQ9BVA1 445 aa15.92■□□□□ 0.14
YIF1A-209ENST00000494836 DPH5Q9H2P9 285 aa15.92■□□□□ 0.14
YIF1A-209ENST00000494836 POT1Q9NUX5 634 aa15.92■□□□□ 0.14
YIF1A-209ENST00000494836 KCNK4Q9NYG8 393 aa15.92■□□□□ 0.14
YIF1A-209ENST00000494836 PSMD13Q9UNM6 376 aa15.92■□□□□ 0.14
YIF1A-209ENST00000494836 WDR37Q9Y2I8 494 aa15.92■□□□□ 0.14
YIF1A-209ENST00000494836 UTP11Q9Y3A2 253 aaKnown RBP15.92■□□□□ 0.14
YIF1A-209ENST00000494836 MRFAP1Q9Y605 127 aa15.92■□□□□ 0.14
YIF1A-209ENST00000494836 AKAP13Q12802 2813 aa15.92■□□□□ 0.14
YIF1A-209ENST00000494836 ZCWPW2A0A1B0GU75 182 aa15.91■□□□□ 0.14
YIF1A-209ENST00000494836 D6RAR5 112 aa15.91■□□□□ 0.14
YIF1A-209ENST00000494836 PRMT5O14744 637 aaPredicted RBP15.91■□□□□ 0.14
YIF1A-209ENST00000494836 PFDN6O15212 129 aa15.91■□□□□ 0.14
YIF1A-209ENST00000494836 CSO75390 466 aaKnown RBP15.91■□□□□ 0.14
YIF1A-209ENST00000494836 BANF1O75531 89 aa15.91■□□□□ 0.14
YIF1A-209ENST00000494836 TTC4O95801 387 aa15.91■□□□□ 0.14
YIF1A-209ENST00000494836 OGNP20774 298 aaKnown RBP15.91■□□□□ 0.14
YIF1A-209ENST00000494836 SLC19A1P41440 591 aa15.91■□□□□ 0.14
YIF1A-209ENST00000494836 ARL4CP56559 192 aa15.91■□□□□ 0.14
YIF1A-209ENST00000494836 CLCA4Q14CN2 919 aa15.91■□□□□ 0.14
YIF1A-209ENST00000494836 AMZ1Q400G9 498 aa15.91■□□□□ 0.14
YIF1A-209ENST00000494836 MSS51Q4VC12 460 aa15.91■□□□□ 0.14
YIF1A-209ENST00000494836 RNF187Q5TA31 235 aaPredicted RBP15.91■□□□□ 0.14
YIF1A-209ENST00000494836 NEPROQ6NW34 567 aa15.91■□□□□ 0.14
YIF1A-209ENST00000494836 SERBP1Q8NC51 408 aaKnown RBP eCLIP15.91■□□□□ 0.14
YIF1A-209ENST00000494836 MNS1Q8NEH6 495 aa15.91■□□□□ 0.14
YIF1A-209ENST00000494836 GPR150Q8NGU9 434 aa15.91■□□□□ 0.14
YIF1A-209ENST00000494836 EBNA1BP2Q99848 306 aaKnown RBP15.91■□□□□ 0.14
YIF1A-209ENST00000494836 LDHAL6BQ9BYZ2 381 aaPredicted RBP15.91■□□□□ 0.14
YIF1A-209ENST00000494836 WWP1Q9H0M0 922 aa15.91■□□□□ 0.14
YIF1A-209ENST00000494836 RAB17Q9H0T7 212 aa15.91■□□□□ 0.14
YIF1A-209ENST00000494836 COG4Q9H9E3 785 aa15.91■□□□□ 0.14
YIF1A-209ENST00000494836 IL1RAPL1Q9NZN1 696 aa15.91■□□□□ 0.14
YIF1A-209ENST00000494836 WHRNQ9P202 907 aa15.91■□□□□ 0.14
YIF1A-209ENST00000494836 ZNF624Q9P2J8 865 aaPredicted RBP15.91■□□□□ 0.14
YIF1A-209ENST00000494836 PIKFYVEQ9Y2I7 2098 aa15.91■□□□□ 0.14
YIF1A-209ENST00000494836 KNTC1P50748 2209 aa15.9■□□□□ 0.14
YIF1A-209ENST00000494836 IGHV1OR21-1A0A087WYE8 117 aa15.9■□□□□ 0.14
YIF1A-209ENST00000494836 TP73O15350 636 aa15.9■□□□□ 0.14
YIF1A-209ENST00000494836 B4GAT1O43505 415 aa15.9■□□□□ 0.14
YIF1A-209ENST00000494836 PPM1FP49593 454 aaPredicted RBP15.9■□□□□ 0.14
YIF1A-209ENST00000494836 GPLD1P80108 840 aa15.9■□□□□ 0.14
YIF1A-209ENST00000494836 THOC5Q13769 683 aaKnown RBP15.9■□□□□ 0.14
YIF1A-209ENST00000494836 CRYMQ14894 314 aa15.9■□□□□ 0.14
YIF1A-209ENST00000494836 RPE65Q16518 533 aa15.9■□□□□ 0.14
YIF1A-209ENST00000494836 LONRF1Q17RB8 773 aa15.9■□□□□ 0.14
YIF1A-209ENST00000494836 ISXQ2M1V0 245 aa15.9■□□□□ 0.14
YIF1A-209ENST00000494836 TYSND1Q2T9J0 566 aa15.9■□□□□ 0.14
YIF1A-209ENST00000494836 MAP9Q49MG5 647 aa15.9■□□□□ 0.14
YIF1A-209ENST00000494836 ZNF658BQ4V348 819 aaPredicted RBP15.9■□□□□ 0.14
YIF1A-209ENST00000494836 DUPD1Q68J44 220 aa15.9■□□□□ 0.14
YIF1A-209ENST00000494836 ZNF470Q6ECI4 717 aa15.9■□□□□ 0.14
YIF1A-209ENST00000494836 C8orf74Q6P047 294 aa15.9■□□□□ 0.14
YIF1A-209ENST00000494836 ZNF449Q6P9G9 518 aa15.9■□□□□ 0.14
YIF1A-209ENST00000494836 XKR5Q6UX68 686 aa15.9■□□□□ 0.14
YIF1A-209ENST00000494836 LRRC6Q86X45 466 aa15.9■□□□□ 0.14
YIF1A-209ENST00000494836 RBM12BQ8IXT5 1001 aaKnown RBP15.9■□□□□ 0.14
YIF1A-209ENST00000494836 LILRA3Q8N6C8 439 aaPredicted RBP15.9■□□□□ 0.14
YIF1A-209ENST00000494836 ELMO1Q92556 727 aa15.9■□□□□ 0.14
YIF1A-209ENST00000494836 LRRC39Q96DD0 335 aa15.9■□□□□ 0.14
YIF1A-209ENST00000494836 PWWP2AQ96N64 755 aa15.9■□□□□ 0.14
YIF1A-209ENST00000494836 TCF12Q99081 682 aa15.9■□□□□ 0.14
YIF1A-209ENST00000494836 TSSK1BQ9BXA7 367 aa15.9■□□□□ 0.14
YIF1A-209ENST00000494836 ZMYND15Q9H091 742 aa15.9■□□□□ 0.14
YIF1A-209ENST00000494836 C20orf96Q9NUD7 363 aaPredicted RBP15.9■□□□□ 0.14
YIF1A-209ENST00000494836 IMP3Q9NV31 184 aaKnown RBP15.9■□□□□ 0.14
YIF1A-209ENST00000494836 ATXN7L1Q9ULK2 861 aaPredicted RBP15.9■□□□□ 0.14
YIF1A-209ENST00000494836 VPS9D1Q9Y2B5 631 aa15.9■□□□□ 0.14
YIF1A-209ENST00000494836 COL27A1Q8IZC6 1860 aaPredicted RBP15.9■□□□□ 0.14
YIF1A-209ENST00000494836 ASPMQ8IZT6 3477 aa15.89■□□□□ 0.13
YIF1A-209ENST00000494836 UBA6A0AVT1 1052 aaPredicted RBP15.89■□□□□ 0.13
YIF1A-209ENST00000494836 LILRA5A6NI73 299 aa15.89■□□□□ 0.13
YIF1A-209ENST00000494836 LIN7AO14910 233 aaPredicted RBP15.89■□□□□ 0.13
YIF1A-209ENST00000494836 CPNE6O95741 557 aa15.89■□□□□ 0.13
YIF1A-209ENST00000494836 MTHFD1P11586 935 aaKnown RBP15.89■□□□□ 0.13
YIF1A-209ENST00000494836 RPS3P23396 243 aaKnown RBP eCLIP15.89■□□□□ 0.132e-7■■■□□ 16.9
YIF1A-209ENST00000494836 PDX1P52945 283 aa15.89■□□□□ 0.13
YIF1A-209ENST00000494836 EPHA4P54764 986 aa15.89■□□□□ 0.13
YIF1A-209ENST00000494836 RPA4Q13156 261 aa15.89■□□□□ 0.13
YIF1A-209ENST00000494836 BOP1Q14137 746 aaKnown RBP15.89■□□□□ 0.13
YIF1A-209ENST00000494836 CLPPQ16740 277 aaPredicted RBP15.89■□□□□ 0.13
YIF1A-209ENST00000494836 SYTL3Q4VX76 610 aa15.89■□□□□ 0.13
YIF1A-209ENST00000494836 SPANXN3Q5MJ09 141 aa15.89■□□□□ 0.13
YIF1A-209ENST00000494836 PTRHD1Q6GMV3 140 aaKnown RBP15.89■□□□□ 0.13
Retrieved 100 of 20,778 RNA–protein pairs in 41.3 ms