RNA–Protein interactions for RNA: ENST00000428894.1

HMGB3P5-201, Transcript of high mobility group box 3 pseudogene 5, humanhuman

BASIC

Gene HMGB3P5, Length 612 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB3P5-201ENST00000428894 MCM3P25205 808 aa4.78□□□□□ -1.64
HMGB3P5-201ENST00000428894 GPD2P43304 727 aa4.78□□□□□ -1.64
HMGB3P5-201ENST00000428894 FUT6P51993 359 aa4.78□□□□□ -1.64
HMGB3P5-201ENST00000428894 CCL23P55773 120 aa4.78□□□□□ -1.64
HMGB3P5-201ENST00000428894 HILS1P60008 231 aa4.78□□□□□ -1.64
HMGB3P5-201ENST00000428894 TFCP2Q12800 502 aa4.78□□□□□ -1.64
HMGB3P5-201ENST00000428894 ITGA7Q13683 1181 aa4.78□□□□□ -1.64
HMGB3P5-201ENST00000428894 ACVR2BQ13705 512 aa4.78□□□□□ -1.64
HMGB3P5-201ENST00000428894 RBM39Q14498 530 aaKnown RBP4.78□□□□□ -1.64
HMGB3P5-201ENST00000428894 SYT16Q17RD7 645 aa4.78□□□□□ -1.64
HMGB3P5-201ENST00000428894 MRGPRG-AS1Q2M3A8 158 aa4.78□□□□□ -1.64
HMGB3P5-201ENST00000428894 SHROOM1Q2M3G4 852 aaPredicted RBP4.78□□□□□ -1.64
HMGB3P5-201ENST00000428894 MMEL1Q495T6 779 aa4.78□□□□□ -1.64
HMGB3P5-201ENST00000428894 TAF3Q5VWG9 929 aa4.78□□□□□ -1.64
HMGB3P5-201ENST00000428894 CCNI2Q6ZMN8 369 aaPredicted RBP4.78□□□□□ -1.64
HMGB3P5-201ENST00000428894 TMEM179Q6ZVK1 233 aa4.78□□□□□ -1.64
HMGB3P5-201ENST00000428894 IL17RCQ8NAC3 791 aa4.78□□□□□ -1.64
HMGB3P5-201ENST00000428894 SCCPDHQ8NBX0 429 aa4.78□□□□□ -1.64
HMGB3P5-201ENST00000428894 TNIP2Q8NFZ5 429 aa4.78□□□□□ -1.64
HMGB3P5-201ENST00000428894 UPF3AQ9H1J1 476 aaKnown RBP4.78□□□□□ -1.64
HMGB3P5-201ENST00000428894 C17orf75Q9HAS0 396 aa4.78□□□□□ -1.64
HMGB3P5-201ENST00000428894 CNGB3Q9NQW8 809 aa4.78□□□□□ -1.64
HMGB3P5-201ENST00000428894 PA2G4Q9UQ80 394 aaKnown RBP4.78□□□□□ -1.64
HMGB3P5-201ENST00000428894 DDX52Q9Y2R4 599 aaKnown RBP eCLIP4.78□□□□□ -1.64
HMGB3P5-201ENST00000428894 ADAM18Q9Y3Q7 739 aa4.78□□□□□ -1.64
HMGB3P5-201ENST00000428894 PCDHGB3Q9Y5G1 929 aa4.78□□□□□ -1.64
HMGB3P5-201ENST00000428894 COL11A1P12107 1806 aaPredicted RBP4.78□□□□□ -1.64
HMGB3P5-201ENST00000428894 ZDBF2Q9HCK1 2354 aa4.78□□□□□ -1.64
HMGB3P5-201ENST00000428894 TRIOO75962 3097 aa4.78□□□□□ -1.64
HMGB3P5-201ENST00000428894 ZNF318Q5VUA4 2279 aa4.77□□□□□ -1.65
HMGB3P5-201ENST00000428894 C5orf42Q9H799 3197 aa4.77□□□□□ -1.65
HMGB3P5-201ENST00000428894 TEX22C9J3V5 150 aa4.77□□□□□ -1.65
HMGB3P5-201ENST00000428894 RFPL2O75678 378 aa4.77□□□□□ -1.65
HMGB3P5-201ENST00000428894 BAIAP3O94812 1187 aa4.77□□□□□ -1.65
HMGB3P5-201ENST00000428894 SNAI1O95863 264 aaPredicted RBP4.77□□□□□ -1.65
HMGB3P5-201ENST00000428894 ATP1A1P05023 1023 aaKnown RBP4.77□□□□□ -1.65
HMGB3P5-201ENST00000428894 PHEXP78562 749 aa4.77□□□□□ -1.65
HMGB3P5-201ENST00000428894 GRIK3Q13003 919 aa4.77□□□□□ -1.65
HMGB3P5-201ENST00000428894 G3BP1Q13283 466 aaKnown RBP eCLIP4.77□□□□□ -1.65
HMGB3P5-201ENST00000428894 TDGQ13569 410 aa4.77□□□□□ -1.65
HMGB3P5-201ENST00000428894 ACCSLQ4AC99 568 aa4.77□□□□□ -1.65
HMGB3P5-201ENST00000428894 ATG16L1Q676U5 607 aa4.77□□□□□ -1.65
HMGB3P5-201ENST00000428894 PMS2CLQ68D20 193 aa4.77□□□□□ -1.65
HMGB3P5-201ENST00000428894 BBS12Q6ZW61 710 aa4.77□□□□□ -1.65
HMGB3P5-201ENST00000428894 TRMT1LQ7Z2T5 733 aaKnown RBP4.77□□□□□ -1.65
HMGB3P5-201ENST00000428894 KBTBD3Q8NAB2 608 aa4.77□□□□□ -1.65
HMGB3P5-201ENST00000428894 TRIM63Q969Q1 353 aa4.77□□□□□ -1.65
HMGB3P5-201ENST00000428894 FBXL8Q96CD0 374 aa4.77□□□□□ -1.65
HMGB3P5-201ENST00000428894 ELP4Q96EB1 424 aa4.77□□□□□ -1.65
HMGB3P5-201ENST00000428894 TTC14Q96N46 770 aa4.77□□□□□ -1.65
HMGB3P5-201ENST00000428894 BBS4Q96RK4 519 aa4.77□□□□□ -1.65
HMGB3P5-201ENST00000428894 UBE2ZQ9H832 354 aaPredicted RBP4.77□□□□□ -1.65
HMGB3P5-201ENST00000428894 VCPKMTQ9H867 229 aa4.77□□□□□ -1.65
HMGB3P5-201ENST00000428894 SWAP70Q9UH65 585 aa4.77□□□□□ -1.65
HMGB3P5-201ENST00000428894 RCOR1Q9UKL0 485 aa4.77□□□□□ -1.65
HMGB3P5-201ENST00000428894 Q9Y3F1 56 aa4.77□□□□□ -1.65
HMGB3P5-201ENST00000428894 ZNF711Q9Y462 761 aa4.77□□□□□ -1.65
HMGB3P5-201ENST00000428894 PSAT1Q9Y617 370 aa4.77□□□□□ -1.65
HMGB3P5-201ENST00000428894 MYH8P13535 1937 aa4.77□□□□□ -1.65
HMGB3P5-201ENST00000428894 A0A0G2JMZ2 1700 aa4.77□□□□□ -1.65
HMGB3P5-201ENST00000428894 MCM3APO60318 1980 aa4.76□□□□□ -1.65
HMGB3P5-201ENST00000428894 GOLGA6L10A0A0M3HER8 536 aa4.76□□□□□ -1.65
HMGB3P5-201ENST00000428894 A0A1W2PRG0 241 aa4.76□□□□□ -1.65
HMGB3P5-201ENST00000428894 NTN3O00634 580 aaPredicted RBP4.76□□□□□ -1.65
HMGB3P5-201ENST00000428894 URODP06132 367 aa4.76□□□□□ -1.65
HMGB3P5-201ENST00000428894 MMP2P08253 660 aa4.76□□□□□ -1.65
HMGB3P5-201ENST00000428894 ANOS1P23352 680 aa4.76□□□□□ -1.65
HMGB3P5-201ENST00000428894 POU1F1P28069 291 aa4.76□□□□□ -1.65
HMGB3P5-201ENST00000428894 SHMT1P34896 483 aa4.76□□□□□ -1.65
HMGB3P5-201ENST00000428894 CLCN3P51790 818 aa4.76□□□□□ -1.65
HMGB3P5-201ENST00000428894 DYNLL1P63167 89 aaKnown RBP4.76□□□□□ -1.65
HMGB3P5-201ENST00000428894 EFNB1P98172 346 aa4.76□□□□□ -1.65
HMGB3P5-201ENST00000428894 SLC20A2Q08357 652 aa4.76□□□□□ -1.65
HMGB3P5-201ENST00000428894 DMP1Q13316 513 aaPredicted RBP4.76□□□□□ -1.65
HMGB3P5-201ENST00000428894 NFIL3Q16649 462 aa4.76□□□□□ -1.65
HMGB3P5-201ENST00000428894 CPLX2Q6PUV4 134 aaKnown RBP4.76□□□□□ -1.65
HMGB3P5-201ENST00000428894 CXCL17Q6UXB2 119 aa4.76□□□□□ -1.65
HMGB3P5-201ENST00000428894 KRBA2Q6ZNG9 492 aa4.76□□□□□ -1.65
HMGB3P5-201ENST00000428894 DEFB128Q7Z7B8 93 aa4.76□□□□□ -1.65
HMGB3P5-201ENST00000428894 TMTC1Q8IUR5 882 aa4.76□□□□□ -1.65
HMGB3P5-201ENST00000428894 DSELQ8IZU8 1212 aa4.76□□□□□ -1.65
HMGB3P5-201ENST00000428894 TMTC2Q8N394 836 aa4.76□□□□□ -1.65
HMGB3P5-201ENST00000428894 PLD5Q8N7P1 536 aa4.76□□□□□ -1.65
HMGB3P5-201ENST00000428894 OR13A1Q8NGR1 328 aa4.76□□□□□ -1.65
HMGB3P5-201ENST00000428894 LRRC8CQ8TDW0 803 aa4.76□□□□□ -1.65
HMGB3P5-201ENST00000428894 NOC3LQ8WTT2 800 aaKnown RBP4.76□□□□□ -1.65
HMGB3P5-201ENST00000428894 ZSCAN31Q96LW9 406 aaPredicted RBP4.76□□□□□ -1.65
HMGB3P5-201ENST00000428894 PGLYRP2Q96PD5 576 aa4.76□□□□□ -1.65
HMGB3P5-201ENST00000428894 TEX13BQ9BXU2 312 aa4.76□□□□□ -1.65
HMGB3P5-201ENST00000428894 FTOQ9C0B1 505 aaKnown RBP eCLIP4.76□□□□□ -1.65
HMGB3P5-201ENST00000428894 RIC8AQ9NPQ8 531 aa4.76□□□□□ -1.65
HMGB3P5-201ENST00000428894 C1RLQ9NZP8 487 aa4.76□□□□□ -1.65
HMGB3P5-201ENST00000428894 MYO5AQ9Y4I1 1855 aaKnown RBP4.76□□□□□ -1.65
HMGB3P5-201ENST00000428894 PARP14Q460N5 1801 aa4.76□□□□□ -1.65
HMGB3P5-201ENST00000428894 UMODL1Q5DID0 1318 aa4.75□□□□□ -1.65
HMGB3P5-201ENST00000428894 SPTBN4Q9H254 2564 aa4.75□□□□□ -1.65
HMGB3P5-201ENST00000428894 FAM172BPA6NC97 362 aa4.75□□□□□ -1.65
HMGB3P5-201ENST00000428894 EPOPA6NHQ4 379 aa4.75□□□□□ -1.65
HMGB3P5-201ENST00000428894 ASB14A6NK59 587 aa4.75□□□□□ -1.65
HMGB3P5-201ENST00000428894 C16orf97H3BN30 126 aa4.75□□□□□ -1.65
Retrieved 100 of 20,778 RNA–protein pairs in 67.7 ms