RNA–Protein interactions for RNA: ENST00000626874.2

CHD2-208, Transcript of chromodomain helicase DNA binding protein 2, human

TSL 1 (best) BASIC

Gene CHD2, Length 7,764 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
CHD2-208	ENST00000626874	DIP2B	Q9P265	1576 aa		6.84	□□□□□ -1.31
CHD2-208	ENST00000626874	FAM221B	A6H8Z2	402 aa		6.84	□□□□□ -1.31
CHD2-208	ENST00000626874	SLC30A4	O14863	429 aa		6.84	□□□□□ -1.31
CHD2-208	ENST00000626874	HCN1	O60741	890 aa		6.84	□□□□□ -1.31
CHD2-208	ENST00000626874	SMNDC1	O75940	238 aa	Known RBP eCLIP	6.84	□□□□□ -1.31	1e-6	■■□□□ 14.3
CHD2-208	ENST00000626874	PIGN	O95427	931 aa		6.84	□□□□□ -1.31
CHD2-208	ENST00000626874	GNAZ	P19086	355 aa		6.84	□□□□□ -1.31
CHD2-208	ENST00000626874	ZNF41	P51814	821 aa	Predicted RBP	6.84	□□□□□ -1.31
CHD2-208	ENST00000626874	OVGP1	Q12889	678 aa		6.84	□□□□□ -1.31
CHD2-208	ENST00000626874	ZNF776	Q68DI1	518 aa	Predicted RBP	6.84	□□□□□ -1.31
CHD2-208	ENST00000626874	SLC30A6	Q6NXT4	461 aa		6.84	□□□□□ -1.31
CHD2-208	ENST00000626874	CNKSR3	Q6P9H4	555 aa		6.84	□□□□□ -1.31
CHD2-208	ENST00000626874	C15orf52	Q6ZUT6	534 aa	Known RBP	6.84	□□□□□ -1.31
CHD2-208	ENST00000626874	HIPK1	Q86Z02	1210 aa		6.84	□□□□□ -1.31
CHD2-208	ENST00000626874	ZNF540	Q8NDQ6	660 aa		6.84	□□□□□ -1.31
CHD2-208	ENST00000626874	SETD6	Q8TBK2	473 aa		6.84	□□□□□ -1.31
CHD2-208	ENST00000626874	ACBD6	Q9BR61	282 aa		6.84	□□□□□ -1.31
CHD2-208	ENST00000626874	GTPBP2	Q9BX10	602 aa	Known RBP	6.84	□□□□□ -1.31
CHD2-208	ENST00000626874	LRTM1	Q9HBL6	345 aa		6.84	□□□□□ -1.31
CHD2-208	ENST00000626874	TMBIM4	Q9HC24	238 aa		6.84	□□□□□ -1.31
CHD2-208	ENST00000626874	HAO1	Q9UJM8	370 aa		6.84	□□□□□ -1.31
CHD2-208	ENST00000626874	PCDHA2	Q9Y5H9	948 aa		6.84	□□□□□ -1.31
CHD2-208	ENST00000626874	ADAMTS13	Q76LX8	1427 aa		6.84	□□□□□ -1.31
CHD2-208	ENST00000626874		E9PCH4	1651 aa		6.84	□□□□□ -1.31
CHD2-208	ENST00000626874	CST1	P01037	141 aa		6.84	□□□□□ -1.31
CHD2-208	ENST00000626874	CASP5	P51878	434 aa		6.84	□□□□□ -1.31
CHD2-208	ENST00000626874	RBPJ	Q06330	500 aa		6.84	□□□□□ -1.31
CHD2-208	ENST00000626874	MELK	Q14680	651 aa		6.84	□□□□□ -1.31
CHD2-208	ENST00000626874	UAP1L1	Q3KQV9	507 aa		6.84	□□□□□ -1.31
CHD2-208	ENST00000626874	ALG1L	Q6GMV1	187 aa		6.84	□□□□□ -1.31
CHD2-208	ENST00000626874	GJB7	Q6PEY0	223 aa		6.84	□□□□□ -1.31
CHD2-208	ENST00000626874	NANOGNB	Q7Z5D8	188 aa		6.84	□□□□□ -1.31
CHD2-208	ENST00000626874	BORCS8	Q96FH0	119 aa		6.84	□□□□□ -1.31
CHD2-208	ENST00000626874	SLC47A1	Q96FL8	570 aa		6.84	□□□□□ -1.31
CHD2-208	ENST00000626874	IRF2BPL	Q9H1B7	796 aa		6.84	□□□□□ -1.31
CHD2-208	ENST00000626874	LHX5	Q9H2C1	402 aa		6.84	□□□□□ -1.31
CHD2-208	ENST00000626874	RC3H2	Q9HBD1	1191 aa	Known RBP	6.84	□□□□□ -1.31
CHD2-208	ENST00000626874	PFDN2	Q9UHV9	154 aa		6.84	□□□□□ -1.31
CHD2-208	ENST00000626874	FBXW2	Q9UKT8	454 aa		6.84	□□□□□ -1.31
CHD2-208	ENST00000626874	PRPF19	Q9UMS4	504 aa	Known RBP	6.84	□□□□□ -1.31
CHD2-208	ENST00000626874	L1RE1	Q9UN81	338 aa		6.84	□□□□□ -1.31
CHD2-208	ENST00000626874	CNTNAP1	P78357	1384 aa		6.84	□□□□□ -1.31
CHD2-208	ENST00000626874	MADD	Q8WXG6	1647 aa		6.84	□□□□□ -1.31
CHD2-208	ENST00000626874		A0A1B0GVC2	190 aa		6.84	□□□□□ -1.31
CHD2-208	ENST00000626874	KLHL33	A6NCF5	533 aa		6.84	□□□□□ -1.31
CHD2-208	ENST00000626874	GPR37L1	O60883	481 aa		6.84	□□□□□ -1.31
CHD2-208	ENST00000626874	SLITRK3	O94933	977 aa		6.84	□□□□□ -1.31
CHD2-208	ENST00000626874	RARA	P10276	462 aa		6.84	□□□□□ -1.31
CHD2-208	ENST00000626874	RBM34	P42696	430 aa	Known RBP	6.84	□□□□□ -1.31
CHD2-208	ENST00000626874	OR3A3	P47888	321 aa		6.84	□□□□□ -1.31
CHD2-208	ENST00000626874	OR3A2	P47893	321 aa		6.84	□□□□□ -1.31
CHD2-208	ENST00000626874	CNTN2	Q02246	1040 aa		6.84	□□□□□ -1.31
CHD2-208	ENST00000626874	PPP3CA	Q08209	521 aa		6.84	□□□□□ -1.31
CHD2-208	ENST00000626874	INTS6L	Q5JSJ4	861 aa	Known RBP	6.84	□□□□□ -1.31
CHD2-208	ENST00000626874	BRAT1	Q6PJG6	821 aa		6.84	□□□□□ -1.31
CHD2-208	ENST00000626874	PACS2	Q86VP3	889 aa		6.84	□□□□□ -1.31
CHD2-208	ENST00000626874	GLB1L3	Q8NCI6	653 aa	Predicted RBP	6.84	□□□□□ -1.31
CHD2-208	ENST00000626874	C11orf65	Q8NCR3	313 aa		6.84	□□□□□ -1.31
CHD2-208	ENST00000626874	EPS8L3	Q8TE67	593 aa	Known RBP	6.84	□□□□□ -1.31
CHD2-208	ENST00000626874	PIGK	Q92643	395 aa		6.84	□□□□□ -1.31
CHD2-208	ENST00000626874	RTKN	Q9BST9	563 aa		6.84	□□□□□ -1.31
CHD2-208	ENST00000626874	NIFK	Q9BYG3	293 aa	Known RBP	6.84	□□□□□ -1.31
CHD2-208	ENST00000626874	ZNF639	Q9UID6	485 aa		6.84	□□□□□ -1.31
CHD2-208	ENST00000626874	PIK3C2B	O00750	1634 aa		6.84	□□□□□ -1.31
CHD2-208	ENST00000626874	ANXA2P2	A6NMY6	339 aa		6.84	□□□□□ -1.31
CHD2-208	ENST00000626874	ZNF432	O94892	652 aa		6.84	□□□□□ -1.31
CHD2-208	ENST00000626874	IFNW1	P05000	195 aa		6.84	□□□□□ -1.31
CHD2-208	ENST00000626874	ANXA2	P07355	339 aa	Known RBP	6.84	□□□□□ -1.31
CHD2-208	ENST00000626874	CBSL	P0DN79	551 aa		6.84	□□□□□ -1.31
CHD2-208	ENST00000626874	THRB	P10828	461 aa		6.84	□□□□□ -1.31
CHD2-208	ENST00000626874	PRPS2	P11908	318 aa		6.84	□□□□□ -1.31
CHD2-208	ENST00000626874	CBS	P35520	551 aa		6.84	□□□□□ -1.31
CHD2-208	ENST00000626874	CTSO	P43234	321 aa	Predicted RBP	6.84	□□□□□ -1.31
CHD2-208	ENST00000626874	SLC34A1	Q06495	639 aa		6.84	□□□□□ -1.31
CHD2-208	ENST00000626874	KCNA10	Q16322	511 aa		6.84	□□□□□ -1.31
CHD2-208	ENST00000626874	C4orf46	Q504U0	113 aa		6.84	□□□□□ -1.31
CHD2-208	ENST00000626874	PIGZ	Q86VD9	579 aa		6.84	□□□□□ -1.31
CHD2-208	ENST00000626874	SDR16C5	Q8N3Y7	309 aa		6.84	□□□□□ -1.31
CHD2-208	ENST00000626874	CHST4	Q8NCG5	386 aa		6.84	□□□□□ -1.31
CHD2-208	ENST00000626874	TCP10L	Q8TDR4	215 aa		6.84	□□□□□ -1.31
CHD2-208	ENST00000626874	GDPD5	Q8WTR4	605 aa		6.84	□□□□□ -1.31
CHD2-208	ENST00000626874	SHC3	Q92529	594 aa		6.84	□□□□□ -1.31
CHD2-208	ENST00000626874	TBATA	Q96M53	351 aa		6.84	□□□□□ -1.31
CHD2-208	ENST00000626874	RBM4B	Q9BQ04	359 aa	Known RBP	6.84	□□□□□ -1.31
CHD2-208	ENST00000626874	RBM4	Q9BWF3	364 aa	Known RBP	6.84	□□□□□ -1.31
CHD2-208	ENST00000626874	NOD2	Q9HC29	1040 aa		6.84	□□□□□ -1.31
CHD2-208	ENST00000626874	TRPV5	Q9NQA5	729 aa		6.84	□□□□□ -1.31
CHD2-208	ENST00000626874	GDAP2	Q9NXN4	497 aa		6.84	□□□□□ -1.31
CHD2-208	ENST00000626874	ZNF282	Q9UDV7	671 aa	Predicted RBP	6.84	□□□□□ -1.31
CHD2-208	ENST00000626874	GTF2IRD1	Q9UHL9	959 aa		6.84	□□□□□ -1.31
CHD2-208	ENST00000626874	NAALADL1	Q9UQQ1	740 aa		6.84	□□□□□ -1.31
CHD2-208	ENST00000626874	SLC45A1	Q9Y2W3	748 aa		6.84	□□□□□ -1.31
CHD2-208	ENST00000626874	WASF2	Q9Y6W5	498 aa		6.84	□□□□□ -1.31
CHD2-208	ENST00000626874	ZNF521	Q96K83	1311 aa		6.84	□□□□□ -1.31
CHD2-208	ENST00000626874	BTN3A3	O00478	584 aa		6.84	□□□□□ -1.32
CHD2-208	ENST00000626874	IL33	O95760	270 aa		6.84	□□□□□ -1.32
CHD2-208	ENST00000626874	CXCR1	P25024	350 aa		6.84	□□□□□ -1.32
CHD2-208	ENST00000626874	RPS3A	P61247	264 aa	Known RBP	6.84	□□□□□ -1.32
CHD2-208	ENST00000626874	TSPAN5	P62079	268 aa		6.84	□□□□□ -1.32
CHD2-208	ENST00000626874	NFKB2	Q00653	900 aa		6.84	□□□□□ -1.32

Retrieved 100 of 20,778 RNA–protein pairs in 43.5 ms