RNA–Protein interactions for RNA: ENST00000224237.9

VIM-201, Transcript of vimentin, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene VIM, Length 1,868 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VIM-201ENST00000224237 FADS3Q9Y5Q0 445 aa17.88■□□□□ 0.45
VIM-201ENST00000224237 LRRK1Q38SD2 2015 aa17.88■□□□□ 0.45
VIM-201ENST00000224237 FCHO1O14526 889 aa17.88■□□□□ 0.45
VIM-201ENST00000224237 LZTS3O60299 673 aaPredicted RBP17.88■□□□□ 0.45
VIM-201ENST00000224237 SNX2O60749 519 aa17.88■□□□□ 0.45
VIM-201ENST00000224237 DIAPH2O60879 1101 aa17.88■□□□□ 0.45
VIM-201ENST00000224237 ATP5HO75947 161 aa17.88■□□□□ 0.45
VIM-201ENST00000224237 RECQL5O94762 991 aaPredicted RBP17.88■□□□□ 0.45
VIM-201ENST00000224237 SERPINA6P08185 405 aa17.88■□□□□ 0.45
VIM-201ENST00000224237 ALDH18A1P54886 795 aaKnown RBP17.88■□□□□ 0.45
VIM-201ENST00000224237 TGFBIQ15582 683 aa17.88■□□□□ 0.45
VIM-201ENST00000224237 ACSBG2Q5FVE4 666 aa17.88■□□□□ 0.45
VIM-201ENST00000224237 FAM91A1Q658Y4 838 aa17.88■□□□□ 0.45
VIM-201ENST00000224237 DET1Q7L5Y6 550 aa17.88■□□□□ 0.45
VIM-201ENST00000224237 CUZD1Q86UP6 607 aa17.88■□□□□ 0.45
VIM-201ENST00000224237 PHYKPLQ8IUZ5 450 aa17.88■□□□□ 0.45
VIM-201ENST00000224237 AFAP1L2Q8N4X5 818 aa17.88■□□□□ 0.45
VIM-201ENST00000224237 STON2Q8WXE9 905 aa17.88■□□□□ 0.45
VIM-201ENST00000224237 SHCBP1LQ9BZQ2 653 aa17.88■□□□□ 0.45
VIM-201ENST00000224237 NMUR2Q9GZQ4 415 aa17.88■□□□□ 0.45
VIM-201ENST00000224237 C8orf33Q9H7E9 229 aaPredicted RBP17.88■□□□□ 0.45
VIM-201ENST00000224237 KCNK12Q9HB15 430 aa17.88■□□□□ 0.45
VIM-201ENST00000224237 NUDT4Q9NZJ9 180 aa17.88■□□□□ 0.45
VIM-201ENST00000224237 COQ6Q9Y2Z9 468 aa17.88■□□□□ 0.45
VIM-201ENST00000224237 CAPN7Q9Y6W3 813 aa17.88■□□□□ 0.45
VIM-201ENST00000224237 KPNA5O15131 536 aa17.87■□□□□ 0.45
VIM-201ENST00000224237 MID1O15344 667 aa17.87■□□□□ 0.45
VIM-201ENST00000224237 MMP20O60882 483 aa17.87■□□□□ 0.45
VIM-201ENST00000224237 MTX2O75431 263 aa17.87■□□□□ 0.45
VIM-201ENST00000224237 UNC5CO95185 931 aa17.87■□□□□ 0.45
VIM-201ENST00000224237 ASGR2P07307 311 aa17.87■□□□□ 0.45
VIM-201ENST00000224237 ENO3P13929 434 aaPredicted RBP17.87■□□□□ 0.45
VIM-201ENST00000224237 C5AR1P21730 350 aa17.87■□□□□ 0.45
VIM-201ENST00000224237 NTSR1P30989 418 aa17.87■□□□□ 0.45
VIM-201ENST00000224237 DRD3P35462 400 aa17.87■□□□□ 0.45
VIM-201ENST00000224237 TUBB3Q13509 450 aa17.87■□□□□ 0.45
VIM-201ENST00000224237 SDE2Q6IQ49 451 aa17.87■□□□□ 0.45
VIM-201ENST00000224237 SBSNQ6UWP8 590 aa17.87■□□□□ 0.45
VIM-201ENST00000224237 DNASE1L2Q92874 299 aa17.87■□□□□ 0.45
VIM-201ENST00000224237 FAR2Q96K12 515 aa17.87■□□□□ 0.45
VIM-201ENST00000224237 C1QTNF3Q9BXJ4 246 aa17.87■□□□□ 0.45
VIM-201ENST00000224237 FAM126AQ9BYI3 521 aaPredicted RBP17.87■□□□□ 0.45
VIM-201ENST00000224237 SAR1AQ9NR31 198 aa17.87■□□□□ 0.45
VIM-201ENST00000224237 PIAS3Q9Y6X2 628 aa17.87■□□□□ 0.45
VIM-201ENST00000224237 NCF1BA6NI72 391 aaPredicted RBP17.86■□□□□ 0.45
VIM-201ENST00000224237 NCF1CA8MVU1 366 aaPredicted RBP17.86■□□□□ 0.45
VIM-201ENST00000224237 AP1G1O43747 822 aa17.86■□□□□ 0.45
VIM-201ENST00000224237 SIX3O95343 332 aaPredicted RBP17.86■□□□□ 0.45
VIM-201ENST00000224237 NCF1P14598 390 aaPredicted RBP17.86■□□□□ 0.45
VIM-201ENST00000224237 AOAHP28039 575 aa17.86■□□□□ 0.45
VIM-201ENST00000224237 CCR7P32248 378 aa17.86■□□□□ 0.45
VIM-201ENST00000224237 DPTQ07507 201 aa17.86■□□□□ 0.45
VIM-201ENST00000224237 STARD3Q14849 445 aa17.86■□□□□ 0.45
VIM-201ENST00000224237 VWA5B1Q5TIE3 1220 aa17.86■□□□□ 0.45
VIM-201ENST00000224237 RPS27LQ71UM5 84 aaKnown RBP17.86■□□□□ 0.45
VIM-201ENST00000224237 NLRP8Q86W28 1048 aa17.86■□□□□ 0.45
VIM-201ENST00000224237 PLCD3Q8N3E9 789 aa17.86■□□□□ 0.45
VIM-201ENST00000224237 SLC44A3Q8N4M1 653 aa17.86■□□□□ 0.45
VIM-201ENST00000224237 GABRG3Q99928 467 aa17.86■□□□□ 0.45
VIM-201ENST00000224237 CD274Q9NZQ7 290 aa17.86■□□□□ 0.45
VIM-201ENST00000224237 SORCS3Q9UPU3 1222 aa17.86■□□□□ 0.45
VIM-201ENST00000224237 MYO10Q9HD67 2058 aa17.86■□□□□ 0.45
VIM-201ENST00000224237 RAD51BO15315 384 aa17.86■□□□□ 0.45
VIM-201ENST00000224237 FTH1P02794 183 aa17.86■□□□□ 0.45
VIM-201ENST00000224237 RPS17P08708 135 aaKnown RBP17.86■□□□□ 0.45
VIM-201ENST00000224237 DRD1P21728 446 aa17.86■□□□□ 0.45
VIM-201ENST00000224237 EEF1DP29692 281 aaKnown RBP17.86■□□□□ 0.45
VIM-201ENST00000224237 HK3P52790 923 aa17.86■□□□□ 0.45
VIM-201ENST00000224237 PON2Q15165 354 aa17.86■□□□□ 0.45
VIM-201ENST00000224237 PPP1R3AQ16821 1122 aa17.86■□□□□ 0.45
VIM-201ENST00000224237 KHDC1Q4VXA5 237 aaKnown RBP17.86■□□□□ 0.45
VIM-201ENST00000224237 TMEM196Q5HYL7 178 aa17.86■□□□□ 0.45
VIM-201ENST00000224237 AGBL4Q5VU57 503 aa17.86■□□□□ 0.45
VIM-201ENST00000224237 ANKS6Q68DC2 871 aa17.86■□□□□ 0.45
VIM-201ENST00000224237 ZNF776Q68DI1 518 aaPredicted RBP17.86■□□□□ 0.45
VIM-201ENST00000224237 AADATQ8N5Z0 425 aa17.86■□□□□ 0.45
VIM-201ENST00000224237 OR2T3Q8NH03 318 aa17.86■□□□□ 0.45
VIM-201ENST00000224237 CDX2Q99626 313 aaPredicted RBP17.86■□□□□ 0.45
VIM-201ENST00000224237 TUBB6Q9BUF5 446 aa17.86■□□□□ 0.45
VIM-201ENST00000224237 FBRSQ9HAH7 460 aa17.86■□□□□ 0.45
VIM-201ENST00000224237 TSR3Q9UJK0 312 aaKnown RBP17.86■□□□□ 0.45
VIM-201ENST00000224237 OARD1Q9Y530 152 aa17.86■□□□□ 0.45
VIM-201ENST00000224237 H0YHG0 523 aa17.85■□□□□ 0.45
VIM-201ENST00000224237 GRID2O43424 1007 aa17.85■□□□□ 0.45
VIM-201ENST00000224237 TSPAN6O43657 245 aa17.85■□□□□ 0.45
VIM-201ENST00000224237 SOD1P00441 154 aa17.85■□□□□ 0.45
VIM-201ENST00000224237 EGFP01133 1207 aa17.85■□□□□ 0.45
VIM-201ENST00000224237 NCALDP61601 193 aa17.85■□□□□ 0.45
VIM-201ENST00000224237 GBX1Q14549 363 aa17.85■□□□□ 0.45
VIM-201ENST00000224237 SLC9B1Q4ZJI4 515 aa17.85■□□□□ 0.45
VIM-201ENST00000224237 C2orf27AQ580R0 203 aa17.85■□□□□ 0.45
VIM-201ENST00000224237 PLEKHS1Q5SXH7 462 aa17.85■□□□□ 0.45
VIM-201ENST00000224237 RAET1GQ6H3X3 334 aa17.85■□□□□ 0.45
VIM-201ENST00000224237 CYHR1Q6ZMK1 362 aa17.85■□□□□ 0.45
VIM-201ENST00000224237 TRMT11Q7Z4G4 463 aaKnown RBP17.85■□□□□ 0.45
VIM-201ENST00000224237 MAPK15Q8TD08 544 aa17.85■□□□□ 0.45
VIM-201ENST00000224237 TCF7L2Q9NQB0 619 aa17.85■□□□□ 0.45
VIM-201ENST00000224237 UTP6Q9NYH9 597 aaKnown RBP17.85■□□□□ 0.45
VIM-201ENST00000224237 MBD1Q9UIS9 605 aaPredicted RBP17.85■□□□□ 0.45
VIM-201ENST00000224237 TRPC5OSA6NMA1 111 aa17.84■□□□□ 0.45
Retrieved 100 of 20,778 RNA–protein pairs in 82.6 ms