RNA–Protein interactions for RNA: ENST00000558868.5

TPM1-215, Transcript of tropomyosin 1, humanhuman

TSL 2

Gene TPM1, Length 653 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM1-215ENST00000558868 C5AR1P21730 350 aa13.61□□□□□ -0.23
TPM1-215ENST00000558868 CREB5Q02930 508 aa13.61□□□□□ -0.23
TPM1-215ENST00000558868 STARD3Q14849 445 aa13.61□□□□□ -0.23
TPM1-215ENST00000558868 TSNQ15631 228 aaKnown RBP13.61□□□□□ -0.23
TPM1-215ENST00000558868 AAK1Q2M2I8 961 aa13.61□□□□□ -0.23
TPM1-215ENST00000558868 RFLNAQ6ZTI6 216 aa13.61□□□□□ -0.23
TPM1-215ENST00000558868 CLDN19Q8N6F1 224 aa13.61□□□□□ -0.23
TPM1-215ENST00000558868 ZNF781Q8N8C0 355 aa13.61□□□□□ -0.23
TPM1-215ENST00000558868 GIMAP7Q8NHV1 300 aa13.61□□□□□ -0.23
TPM1-215ENST00000558868 MAFAQ8NHW3 353 aaPredicted RBP13.61□□□□□ -0.23
TPM1-215ENST00000558868 BTN2A2Q8WVV5 523 aa13.61□□□□□ -0.23
TPM1-215ENST00000558868 PHF21BQ96EK2 531 aa13.61□□□□□ -0.23
TPM1-215ENST00000558868 MSANTD3Q96H12 275 aa13.61□□□□□ -0.23
TPM1-215ENST00000558868 SLC30A3Q99726 388 aa13.61□□□□□ -0.23
TPM1-215ENST00000558868 ZCCHC2Q9C0B9 1178 aaKnown RBP13.61□□□□□ -0.23
TPM1-215ENST00000558868 CYP4F12Q9HCS2 524 aa13.61□□□□□ -0.23
TPM1-215ENST00000558868 SAR1AQ9NR31 198 aa13.61□□□□□ -0.23
TPM1-215ENST00000558868 TXLNGQ9NUQ3 528 aa13.61□□□□□ -0.23
TPM1-215ENST00000558868 PNPOQ9NVS9 261 aa13.61□□□□□ -0.23
TPM1-215ENST00000558868 NUDT4Q9NZJ9 180 aa13.61□□□□□ -0.23
TPM1-215ENST00000558868 GALPQ9UBC7 116 aa13.61□□□□□ -0.23
TPM1-215ENST00000558868 HCN2Q9UL51 889 aa13.61□□□□□ -0.23
TPM1-215ENST00000558868 SORCS3Q9UPU3 1222 aa13.61□□□□□ -0.23
TPM1-215ENST00000558868 PRSS21Q9Y6M0 314 aa13.61□□□□□ -0.23
TPM1-215ENST00000558868 NPEPPSL1A6NEC2 478 aa13.6□□□□□ -0.23
TPM1-215ENST00000558868 NEMP2A6NFY4 417 aa13.6□□□□□ -0.23
TPM1-215ENST00000558868 IQCF5A8MTL0 148 aa13.6□□□□□ -0.23
TPM1-215ENST00000558868 K7EQS6 105 aa13.6□□□□□ -0.23
TPM1-215ENST00000558868 UBXN8O00124 270 aa13.6□□□□□ -0.23
TPM1-215ENST00000558868 HDAC3O15379 428 aa13.6□□□□□ -0.23
TPM1-215ENST00000558868 TSPAN6O43657 245 aa13.6□□□□□ -0.23
TPM1-215ENST00000558868 AP1G1O43747 822 aa13.6□□□□□ -0.23
TPM1-215ENST00000558868 SNX2O60749 519 aa13.6□□□□□ -0.23
TPM1-215ENST00000558868 HNRNPCL1O60812 293 aaKnown RBP13.6□□□□□ -0.23
TPM1-215ENST00000558868 FTH1P02794 183 aa13.6□□□□□ -0.23
TPM1-215ENST00000558868 GLULP15104 373 aa13.6□□□□□ -0.23
TPM1-215ENST00000558868 NTSR1P30989 418 aa13.6□□□□□ -0.23
TPM1-215ENST00000558868 CTHP32929 405 aa13.6□□□□□ -0.23
TPM1-215ENST00000558868 CA5AP35218 305 aa13.6□□□□□ -0.23
TPM1-215ENST00000558868 KIR2DL1P43626 348 aaPredicted RBP13.6□□□□□ -0.23
TPM1-215ENST00000558868 SOX9P48436 509 aa13.6□□□□□ -0.23
TPM1-215ENST00000558868 KCNC1P48547 511 aa13.6□□□□□ -0.23
TPM1-215ENST00000558868 ALDH18A1P54886 795 aaKnown RBP13.6□□□□□ -0.23
TPM1-215ENST00000558868 CORO7P57737 925 aa13.6□□□□□ -0.23
TPM1-215ENST00000558868 GRSF1Q12849 480 aaKnown RBP eCLIP13.6□□□□□ -0.23
TPM1-215ENST00000558868 BNIP1Q12981 228 aa13.6□□□□□ -0.23
TPM1-215ENST00000558868 TBCCQ15814 346 aa13.6□□□□□ -0.23
TPM1-215ENST00000558868 ZNF678Q5SXM1 525 aa13.6□□□□□ -0.23
TPM1-215ENST00000558868 FAM91A1Q658Y4 838 aa13.6□□□□□ -0.23
TPM1-215ENST00000558868 SEL1L3Q68CR1 1132 aa13.6□□□□□ -0.23
TPM1-215ENST00000558868 ZNF776Q68DI1 518 aaPredicted RBP13.6□□□□□ -0.23
TPM1-215ENST00000558868 FRMD7Q6ZUT3 714 aa13.6□□□□□ -0.23
TPM1-215ENST00000558868 FRA10AC1Q70Z53 315 aa13.6□□□□□ -0.23
TPM1-215ENST00000558868 MTDHQ86UE4 582 aaKnown RBP13.6□□□□□ -0.23
TPM1-215ENST00000558868 PHYKPLQ8IUZ5 450 aa13.6□□□□□ -0.23
TPM1-215ENST00000558868 PTGR2Q8N8N7 351 aaPredicted RBP13.6□□□□□ -0.23
TPM1-215ENST00000558868 EXT2Q93063 718 aa13.6□□□□□ -0.23
TPM1-215ENST00000558868 SCAMP4Q969E2 229 aa13.6□□□□□ -0.23
TPM1-215ENST00000558868 GLYATL1Q969I3 302 aa13.6□□□□□ -0.23
TPM1-215ENST00000558868 FUBP1Q96AE4 644 aaKnown RBP13.6□□□□□ -0.23
TPM1-215ENST00000558868 SKA1Q96BD8 255 aa13.6□□□□□ -0.23
TPM1-215ENST00000558868 ERP27Q96DN0 273 aa13.6□□□□□ -0.23
TPM1-215ENST00000558868 NUS1Q96E22 293 aa13.6□□□□□ -0.23
TPM1-215ENST00000558868 TMEM237Q96Q45 408 aa13.6□□□□□ -0.23
TPM1-215ENST00000558868 ACOX2Q99424 681 aa13.6□□□□□ -0.23
TPM1-215ENST00000558868 WRAP53Q9BUR4 548 aaKnown RBP13.6□□□□□ -0.23
TPM1-215ENST00000558868 FAM126AQ9BYI3 521 aaPredicted RBP13.6□□□□□ -0.23
TPM1-215ENST00000558868 MYLK2Q9H1R3 596 aa13.6□□□□□ -0.23
TPM1-215ENST00000558868 PLXNA2O75051 1894 aa13.59□□□□□ -0.23
TPM1-215ENST00000558868 GRXCR2A6NFK2 248 aa13.59□□□□□ -0.23
TPM1-215ENST00000558868 TRPC5OSA6NMA1 111 aa13.59□□□□□ -0.23
TPM1-215ENST00000558868 C2CD4DB7Z1M9 353 aa13.59□□□□□ -0.23
TPM1-215ENST00000558868 H3BQ06 376 aaPredicted RBP13.59□□□□□ -0.23
TPM1-215ENST00000558868 CDC7O00311 574 aa13.59□□□□□ -0.23
TPM1-215ENST00000558868 MATN2O00339 956 aa13.59□□□□□ -0.23
TPM1-215ENST00000558868 RAD51BO15315 384 aa13.59□□□□□ -0.23
TPM1-215ENST00000558868 KLK8O60259 260 aa13.59□□□□□ -0.23
TPM1-215ENST00000558868 SUPT7LO94864 414 aa13.59□□□□□ -0.23
TPM1-215ENST00000558868 CHRNGP07510 517 aa13.59□□□□□ -0.23
TPM1-215ENST00000558868 C6P13671 934 aa13.59□□□□□ -0.23
TPM1-215ENST00000558868 MTHFD2P13995 350 aa13.59□□□□□ -0.23
TPM1-215ENST00000558868 ITGB6P18564 788 aa13.59□□□□□ -0.23
TPM1-215ENST00000558868 KCNA5P22460 613 aa13.59□□□□□ -0.23
TPM1-215ENST00000558868 MPSTP25325 297 aa13.59□□□□□ -0.23
TPM1-215ENST00000558868 SERPINB3P29508 390 aa13.59□□□□□ -0.23
TPM1-215ENST00000558868 ARRB2P32121 409 aa13.59□□□□□ -0.23
TPM1-215ENST00000558868 TIE1P35590 1138 aa13.59□□□□□ -0.23
TPM1-215ENST00000558868 P2RY2P41231 377 aa13.59□□□□□ -0.23
TPM1-215ENST00000558868 IDH3AP50213 366 aa13.59□□□□□ -0.23
TPM1-215ENST00000558868 B4GALNT1Q00973 533 aa13.59□□□□□ -0.23
TPM1-215ENST00000558868 SATB1Q01826 763 aa13.59□□□□□ -0.23
TPM1-215ENST00000558868 DPTQ07507 201 aa13.59□□□□□ -0.23
TPM1-215ENST00000558868 CNTN1Q12860 1018 aa13.59□□□□□ -0.23
TPM1-215ENST00000558868 SFSWAPQ12872 951 aaKnown RBP13.59□□□□□ -0.23
TPM1-215ENST00000558868 CST6Q15828 149 aa13.59□□□□□ -0.23
TPM1-215ENST00000558868 PFKFB4Q16877 469 aa13.59□□□□□ -0.23
TPM1-215ENST00000558868 PLEKHS1Q5SXH7 462 aa13.59□□□□□ -0.23
TPM1-215ENST00000558868 METTL21CQ5VZV1 264 aa13.59□□□□□ -0.23
TPM1-215ENST00000558868 ANKS6Q68DC2 871 aa13.59□□□□□ -0.23
TPM1-215ENST00000558868 EPGNQ6UW88 154 aa13.59□□□□□ -0.23
Retrieved 100 of 20,778 RNA–protein pairs in 45.1 ms