RNA–Protein interactions for RNA: ENST00000496050.1

SSR3-208, Transcript of signal sequence receptor subunit 3, humanhuman

TSL 4 BASIC

Gene SSR3, Length 579 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSR3-208ENST00000496050 CLIP4Q8N3C7 705 aa5.33□□□□□ -1.56
SSR3-208ENST00000496050 ZBTB8BQ8NAP8 495 aaPredicted RBP5.33□□□□□ -1.56
SSR3-208ENST00000496050 PPP4R1Q8TF05 950 aa5.33□□□□□ -1.56
SSR3-208ENST00000496050 HDAC11Q96DB2 347 aa5.33□□□□□ -1.56
SSR3-208ENST00000496050 ZNF830Q96NB3 372 aaPredicted RBP5.33□□□□□ -1.56
SSR3-208ENST00000496050 FCRL4Q96PJ5 515 aa5.33□□□□□ -1.56
SSR3-208ENST00000496050 RAB3IPQ96QF0 476 aaPredicted RBP5.33□□□□□ -1.56
SSR3-208ENST00000496050 CSF3RQ99062 836 aa5.33□□□□□ -1.56
SSR3-208ENST00000496050 MOV10L1Q9BXT6 1211 aaKnown RBP5.33□□□□□ -1.56
SSR3-208ENST00000496050 EDEM3Q9BZQ6 932 aa5.33□□□□□ -1.56
SSR3-208ENST00000496050 GPR88Q9GZN0 384 aa5.33□□□□□ -1.56
SSR3-208ENST00000496050 TUBE1Q9UJT0 475 aa5.33□□□□□ -1.56
SSR3-208ENST00000496050 PCDHA7Q9UN72 937 aa5.33□□□□□ -1.56
SSR3-208ENST00000496050 PTPRCP08575 1304 aa5.32□□□□□ -1.56
SSR3-208ENST00000496050 SSX4O60224 188 aa5.32□□□□□ -1.56
SSR3-208ENST00000496050 TSPAN1O60635 241 aa5.32□□□□□ -1.56
SSR3-208ENST00000496050 TADA2AO75478 443 aa5.32□□□□□ -1.56
SSR3-208ENST00000496050 TRUB2O95900 331 aaKnown RBP5.32□□□□□ -1.56
SSR3-208ENST00000496050 HSP90AB1P08238 724 aaKnown RBP5.32□□□□□ -1.56
SSR3-208ENST00000496050 LINGO3P0C6S8 592 aa5.32□□□□□ -1.56
SSR3-208ENST00000496050 CDH13P55290 713 aa5.32□□□□□ -1.56
SSR3-208ENST00000496050 CD81P60033 236 aa5.32□□□□□ -1.56
SSR3-208ENST00000496050 TRAF3Q13114 568 aa5.32□□□□□ -1.56
SSR3-208ENST00000496050 CAMK2DQ13557 499 aa5.32□□□□□ -1.56
SSR3-208ENST00000496050 MELKQ14680 651 aa5.32□□□□□ -1.56
SSR3-208ENST00000496050 C6orf163Q5TEZ5 329 aa5.32□□□□□ -1.56
SSR3-208ENST00000496050 FAM109BQ6ICB4 259 aaPredicted RBP5.32□□□□□ -1.56
SSR3-208ENST00000496050 TMEM211Q6ICI0 200 aa5.32□□□□□ -1.56
SSR3-208ENST00000496050 TRNP1Q6NT89 227 aa5.32□□□□□ -1.56
SSR3-208ENST00000496050 IL27RAQ6UWB1 636 aa5.32□□□□□ -1.56
SSR3-208ENST00000496050 GALNT13Q8IUC8 556 aa5.32□□□□□ -1.56
SSR3-208ENST00000496050 ADHFE1Q8IWW8 467 aa5.32□□□□□ -1.56
SSR3-208ENST00000496050 ACVR1CQ8NER5 493 aa5.32□□□□□ -1.56
SSR3-208ENST00000496050 OR5R1Q8NH85 324 aa5.32□□□□□ -1.56
SSR3-208ENST00000496050 EXD1Q8NHP7 514 aa5.32□□□□□ -1.56
SSR3-208ENST00000496050 TANKQ92844 425 aa5.32□□□□□ -1.56
SSR3-208ENST00000496050 SECISBP2LQ93073 1101 aaKnown RBP5.32□□□□□ -1.56
SSR3-208ENST00000496050 ERLEC1Q96DZ1 483 aa5.32□□□□□ -1.56
SSR3-208ENST00000496050 SCMH1Q96GD3 660 aa5.32□□□□□ -1.56
SSR3-208ENST00000496050 SPRY4Q9C004 299 aa5.32□□□□□ -1.56
SSR3-208ENST00000496050 SMARCAL1Q9NZC9 954 aa5.32□□□□□ -1.56
SSR3-208ENST00000496050 B3GALT5Q9Y2C3 310 aa5.32□□□□□ -1.56
SSR3-208ENST00000496050 AMDHD2Q9Y303 409 aa5.32□□□□□ -1.56
SSR3-208ENST00000496050 CREG1O75629 220 aa5.31□□□□□ -1.56
SSR3-208ENST00000496050 ZNF75DP51815 510 aa5.31□□□□□ -1.56
SSR3-208ENST00000496050 BNC1Q01954 994 aa5.31□□□□□ -1.56
SSR3-208ENST00000496050 ZNF155Q12901 538 aaPredicted RBP5.31□□□□□ -1.56
SSR3-208ENST00000496050 RALGDSQ12967 914 aa5.31□□□□□ -1.56
SSR3-208ENST00000496050 NR1D2Q14995 579 aa5.31□□□□□ -1.56
SSR3-208ENST00000496050 TNIP1Q15025 636 aa5.31□□□□□ -1.56
SSR3-208ENST00000496050 TMEM35AQ53FP2 167 aa5.31□□□□□ -1.56
SSR3-208ENST00000496050 HECTD3Q5T447 861 aa5.31□□□□□ -1.56
SSR3-208ENST00000496050 ZNF549Q6P9A3 640 aa5.31□□□□□ -1.56
SSR3-208ENST00000496050 RBPMS2Q6ZRY4 209 aaKnown RBP5.31□□□□□ -1.56
SSR3-208ENST00000496050 C1QL2Q7Z5L3 287 aa5.31□□□□□ -1.56
SSR3-208ENST00000496050 TMEM173Q86WV6 379 aaPredicted RBP5.31□□□□□ -1.56
SSR3-208ENST00000496050 AFAP1Q8N556 730 aa5.31□□□□□ -1.56
SSR3-208ENST00000496050 WDR20Q8TBZ3 569 aa5.31□□□□□ -1.56
SSR3-208ENST00000496050 SMG7Q92540 1137 aaKnown RBP5.31□□□□□ -1.56
SSR3-208ENST00000496050 PIGTQ969N2 578 aa5.31□□□□□ -1.56
SSR3-208ENST00000496050 PRMT6Q96LA8 375 aaPredicted RBP5.31□□□□□ -1.56
SSR3-208ENST00000496050 GBP5Q96PP8 586 aa5.31□□□□□ -1.56
SSR3-208ENST00000496050 SLC22A12Q96S37 553 aa5.31□□□□□ -1.56
SSR3-208ENST00000496050 NAA11Q9BSU3 229 aaPredicted RBP5.31□□□□□ -1.56
SSR3-208ENST00000496050 NUP85Q9BW27 656 aa5.31□□□□□ -1.56
SSR3-208ENST00000496050 SEZ6LQ9BYH1 1024 aa5.31□□□□□ -1.56
SSR3-208ENST00000496050 OPA3Q9H6K4 179 aa5.31□□□□□ -1.56
SSR3-208ENST00000496050 NOL11Q9H8H0 719 aaKnown RBP5.31□□□□□ -1.56
SSR3-208ENST00000496050 MRPL44Q9H9J2 332 aaKnown RBP5.31□□□□□ -1.56
SSR3-208ENST00000496050 C1RLQ9NZP8 487 aa5.31□□□□□ -1.56
SSR3-208ENST00000496050 SELENONQ9NZV5 590 aa5.31□□□□□ -1.56
SSR3-208ENST00000496050 STK26Q9P289 416 aa5.31□□□□□ -1.56
SSR3-208ENST00000496050 WNT16Q9UBV4 365 aa5.31□□□□□ -1.56
SSR3-208ENST00000496050 ANAPC5Q9UJX4 755 aa5.31□□□□□ -1.56
SSR3-208ENST00000496050 PADI3Q9ULW8 664 aa5.31□□□□□ -1.56
SSR3-208ENST00000496050 PDS5AQ29RF7 1337 aaKnown RBP5.3□□□□□ -1.56
SSR3-208ENST00000496050 IGLV5-37A0A075B6J1 123 aa5.3□□□□□ -1.56
SSR3-208ENST00000496050 FAM170AA1A519 330 aa5.3□□□□□ -1.56
SSR3-208ENST00000496050 LILRA5A6NI73 299 aa5.3□□□□□ -1.56
SSR3-208ENST00000496050 C15orf62A8K5M9 175 aa5.3□□□□□ -1.56
SSR3-208ENST00000496050 DIAPH2O60879 1101 aa5.3□□□□□ -1.56
SSR3-208ENST00000496050 OAZ2O95190 189 aa5.3□□□□□ -1.56
SSR3-208ENST00000496050 GLULP15104 373 aa5.3□□□□□ -1.56
SSR3-208ENST00000496050 S1PR1P21453 382 aa5.3□□□□□ -1.56
SSR3-208ENST00000496050 DNASE1P24855 282 aa5.3□□□□□ -1.56
SSR3-208ENST00000496050 CORO1AP31146 461 aaKnown RBP5.3□□□□□ -1.56
SSR3-208ENST00000496050 MC5RP33032 325 aa5.3□□□□□ -1.56
SSR3-208ENST00000496050 TMPOP42166 694 aaKnown RBP5.3□□□□□ -1.56
SSR3-208ENST00000496050 EEF1A1P68104 462 aaKnown RBP5.3□□□□□ -1.56
SSR3-208ENST00000496050 CDK3Q00526 305 aa5.3□□□□□ -1.56
SSR3-208ENST00000496050 MYBPHQ13203 477 aa5.3□□□□□ -1.56
SSR3-208ENST00000496050 EEF1A1P5Q5VTE0 462 aa5.3□□□□□ -1.56
SSR3-208ENST00000496050 ALS2CLQ60I27 953 aa5.3□□□□□ -1.56
SSR3-208ENST00000496050 TEX38Q6PEX7 206 aa5.3□□□□□ -1.56
SSR3-208ENST00000496050 RHBDF2Q6PJF5 856 aa5.3□□□□□ -1.56
SSR3-208ENST00000496050 GALNTL5Q7Z4T8 443 aa5.3□□□□□ -1.56
SSR3-208ENST00000496050 FBXL14Q8N1E6 418 aa5.3□□□□□ -1.56
SSR3-208ENST00000496050 IQCF1Q8N6M8 205 aa5.3□□□□□ -1.56
SSR3-208ENST00000496050 XXYLT1Q8NBI6 393 aa5.3□□□□□ -1.56
SSR3-208ENST00000496050 PAPD5Q8NDF8 572 aaKnown RBP5.3□□□□□ -1.56
Retrieved 100 of 20,778 RNA–protein pairs in 111.4 ms