RNA–Protein interactions for RNA: ENST00000228872.8

CDKN1B-201, Transcript of cyclin dependent kinase inhibitor 1B, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CDKN1B, Length 2,657 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDKN1B-201ENST00000228872 TYW5A2RUC4 315 aaKnown RBP17.52■□□□□ 0.39
CDKN1B-201ENST00000228872 G3V2T6 193 aa17.52■□□□□ 0.39
CDKN1B-201ENST00000228872 TSPAN1O60635 241 aa17.52■□□□□ 0.39
CDKN1B-201ENST00000228872 C1RP00736 705 aa17.52■□□□□ 0.39
CDKN1B-201ENST00000228872 RAP2AP10114 183 aa17.52■□□□□ 0.39
CDKN1B-201ENST00000228872 CYBAP13498 195 aa17.52■□□□□ 0.39
CDKN1B-201ENST00000228872 CASP3P42574 277 aa17.52■□□□□ 0.39
CDKN1B-201ENST00000228872 CASP2P42575 452 aa17.52■□□□□ 0.39
CDKN1B-201ENST00000228872 IST1P53990 364 aa17.52■□□□□ 0.39
CDKN1B-201ENST00000228872 NFKB2Q00653 900 aa17.52■□□□□ 0.39
CDKN1B-201ENST00000228872 FPGSQ05932 587 aa17.52■□□□□ 0.39
CDKN1B-201ENST00000228872 EPS8Q12929 822 aa17.52■□□□□ 0.39
CDKN1B-201ENST00000228872 ACOX1Q15067 660 aa17.52■□□□□ 0.39
CDKN1B-201ENST00000228872 HECTD2Q5U5R9 776 aa17.52■□□□□ 0.39
CDKN1B-201ENST00000228872 MFSD14CQ5VZR4 134 aa17.52■□□□□ 0.39
CDKN1B-201ENST00000228872 TMEM207Q6UWW9 146 aa17.52■□□□□ 0.39
CDKN1B-201ENST00000228872 PAGE2Q7Z2X7 111 aa17.52■□□□□ 0.39
CDKN1B-201ENST00000228872 ISCA2Q86U28 154 aa17.52■□□□□ 0.39
CDKN1B-201ENST00000228872 TRPV1Q8NER1 839 aa17.52■□□□□ 0.39
CDKN1B-201ENST00000228872 EXT2Q93063 718 aa17.52■□□□□ 0.39
CDKN1B-201ENST00000228872 ZNF300Q96RE9 604 aaPredicted RBP17.52■□□□□ 0.39
CDKN1B-201ENST00000228872 MAGEL2Q9UJ55 1249 aa17.52■□□□□ 0.39
CDKN1B-201ENST00000228872 GABRQQ9UN88 632 aa17.52■□□□□ 0.39
CDKN1B-201ENST00000228872 M0QX08 132 aa17.51■□□□□ 0.39
CDKN1B-201ENST00000228872 NOBOXO60393 691 aa17.51■□□□□ 0.39
CDKN1B-201ENST00000228872 SMIM10L2AP0DMW4 78 aa17.51■□□□□ 0.39
CDKN1B-201ENST00000228872 SMIM10L2BP0DMW5 78 aa17.51■□□□□ 0.39
CDKN1B-201ENST00000228872 LMO2P25791 158 aa17.51■□□□□ 0.39
CDKN1B-201ENST00000228872 ACVR2AP27037 513 aa17.51■□□□□ 0.39
CDKN1B-201ENST00000228872 HCAR3P49019 387 aa17.51■□□□□ 0.39
CDKN1B-201ENST00000228872 EMX2Q04743 252 aa17.51■□□□□ 0.39
CDKN1B-201ENST00000228872 MFSD10Q14728 455 aa17.51■□□□□ 0.39
CDKN1B-201ENST00000228872 SMUG1Q53HV7 270 aa17.51■□□□□ 0.39
CDKN1B-201ENST00000228872 GPR158Q5T848 1215 aa17.51■□□□□ 0.39
CDKN1B-201ENST00000228872 ANKRD34AQ69YU3 496 aa17.51■□□□□ 0.39
CDKN1B-201ENST00000228872 RORBQ92753 470 aa17.51■□□□□ 0.39
CDKN1B-201ENST00000228872 CELF6Q96J87 481 aaKnown RBP17.51■□□□□ 0.39
CDKN1B-201ENST00000228872 OSBPL10Q9BXB5 764 aa17.51■□□□□ 0.39
CDKN1B-201ENST00000228872 SLIRPQ9GZT3 109 aaKnown RBP17.51■□□□□ 0.39
CDKN1B-201ENST00000228872 LEF1Q9UJU2 399 aaPredicted RBP17.51■□□□□ 0.39
CDKN1B-201ENST00000228872 PCDHGB1Q9Y5G3 927 aa17.51■□□□□ 0.39
CDKN1B-201ENST00000228872 LRRC14BA6NHZ5 514 aa17.51■□□□□ 0.39
CDKN1B-201ENST00000228872 TNFRSF10AO00220 468 aa17.51■□□□□ 0.39
CDKN1B-201ENST00000228872 DUSP11O75319 330 aaKnown RBP17.51■□□□□ 0.39
CDKN1B-201ENST00000228872 NDST3O95803 873 aa17.51■□□□□ 0.39
CDKN1B-201ENST00000228872 ISL1P61371 349 aa17.51■□□□□ 0.39
CDKN1B-201ENST00000228872 NCS1P62166 190 aa17.51■□□□□ 0.39
CDKN1B-201ENST00000228872 FAM98BQ52LJ0 330 aaKnown RBP17.51■□□□□ 0.39
CDKN1B-201ENST00000228872 SULT1C3Q6IMI6 304 aa17.51■□□□□ 0.39
CDKN1B-201ENST00000228872 HFE2Q6ZVN8 426 aa17.51■□□□□ 0.39
CDKN1B-201ENST00000228872 P2RY8Q86VZ1 359 aa17.51■□□□□ 0.39
CDKN1B-201ENST00000228872 LRRC49Q8IUZ0 686 aa17.51■□□□□ 0.39
CDKN1B-201ENST00000228872 CRYBG2Q8N1P7 616 aa17.51■□□□□ 0.39
CDKN1B-201ENST00000228872 PNPLA1Q8N8W4 532 aa17.51■□□□□ 0.39
CDKN1B-201ENST00000228872 TP53INP1Q96A56 240 aa17.51■□□□□ 0.39
CDKN1B-201ENST00000228872 NTAN1Q96AB6 310 aa17.51■□□□□ 0.39
CDKN1B-201ENST00000228872 SLC2A13Q96QE2 648 aa17.51■□□□□ 0.39
CDKN1B-201ENST00000228872 EXD2Q9NVH0 621 aa17.51■□□□□ 0.39
CDKN1B-201ENST00000228872 TIMM22Q9Y584 194 aa17.51■□□□□ 0.39
CDKN1B-201ENST00000228872 SNX10Q9Y5X0 201 aa17.51■□□□□ 0.39
CDKN1B-201ENST00000228872 MBLAC1A4D2B0 266 aaPredicted RBP17.5■□□□□ 0.39
CDKN1B-201ENST00000228872 SIX3O95343 332 aaPredicted RBP17.5■□□□□ 0.39
CDKN1B-201ENST00000228872 DLGAP3O95886 979 aa17.5■□□□□ 0.39
CDKN1B-201ENST00000228872 FSHRP23945 695 aa17.5■□□□□ 0.39
CDKN1B-201ENST00000228872 CHRNA4P43681 627 aa17.5■□□□□ 0.39
CDKN1B-201ENST00000228872 FLT3LGP49771 235 aa17.5■□□□□ 0.39
CDKN1B-201ENST00000228872 PSEN2P49810 448 aa17.5■□□□□ 0.39
CDKN1B-201ENST00000228872 NDUFV1P49821 464 aa17.5■□□□□ 0.39
CDKN1B-201ENST00000228872 RALGPS2Q86X27 583 aaPredicted RBP17.5■□□□□ 0.39
CDKN1B-201ENST00000228872 HS3ST5Q8IZT8 346 aa17.5■□□□□ 0.39
CDKN1B-201ENST00000228872 TMEM199Q8N511 208 aa17.5■□□□□ 0.39
CDKN1B-201ENST00000228872 DTWD1Q8N5C7 304 aa17.5■□□□□ 0.39
CDKN1B-201ENST00000228872 PTGR2Q8N8N7 351 aaPredicted RBP17.5■□□□□ 0.39
CDKN1B-201ENST00000228872 BEST2Q8NFU1 509 aa17.5■□□□□ 0.39
CDKN1B-201ENST00000228872 ITFG1Q8TB96 612 aa17.5■□□□□ 0.39
CDKN1B-201ENST00000228872 PTERQ96BW5 349 aa17.5■□□□□ 0.39
CDKN1B-201ENST00000228872 SLC9A7Q96T83 725 aa17.5■□□□□ 0.39
CDKN1B-201ENST00000228872 KATNAL1Q9BW62 490 aa17.5■□□□□ 0.39
CDKN1B-201ENST00000228872 WDR6Q9NNW5 1121 aaKnown RBP17.5■□□□□ 0.39
CDKN1B-201ENST00000228872 INTS6Q9UL03 887 aaKnown RBP17.5■□□□□ 0.39
CDKN1B-201ENST00000228872 SPO11Q9Y5K1 396 aa17.5■□□□□ 0.39
CDKN1B-201ENST00000228872 FAM92AA1XBS5 289 aa17.5■□□□□ 0.39
CDKN1B-201ENST00000228872 CCDC154A6NI56 674 aa17.5■□□□□ 0.39
CDKN1B-201ENST00000228872 ZBBXA8MT70 800 aa17.5■□□□□ 0.39
CDKN1B-201ENST00000228872 ENO2P09104 434 aaPredicted RBP17.5■□□□□ 0.39
CDKN1B-201ENST00000228872 SPNP16150 400 aa17.5■□□□□ 0.39
CDKN1B-201ENST00000228872 COPZ1P61923 177 aa17.5■□□□□ 0.39
CDKN1B-201ENST00000228872 PPP2R2BQ00005 443 aa17.5■□□□□ 0.39
CDKN1B-201ENST00000228872 CDC42EP1Q00587 391 aa17.5■□□□□ 0.39
CDKN1B-201ENST00000228872 CHRNB3Q05901 458 aa17.5■□□□□ 0.39
CDKN1B-201ENST00000228872 SCAPQ12770 1279 aa17.5■□□□□ 0.39
CDKN1B-201ENST00000228872 DDX59Q5T1V6 619 aaKnown RBP eCLIP17.5■□□□□ 0.39
CDKN1B-201ENST00000228872 SLX4IPQ5VYV7 408 aa17.5■□□□□ 0.39
CDKN1B-201ENST00000228872 TAS2R42Q7RTR8 314 aa17.5■□□□□ 0.39
CDKN1B-201ENST00000228872 PRSS48Q7RTY5 328 aa17.5■□□□□ 0.39
CDKN1B-201ENST00000228872 CCDC117Q8IWD4 279 aaPredicted RBP17.5■□□□□ 0.39
CDKN1B-201ENST00000228872 POC5Q8NA72 575 aa17.5■□□□□ 0.39
CDKN1B-201ENST00000228872 TSGA13Q96PP4 275 aa17.5■□□□□ 0.39
CDKN1B-201ENST00000228872 ASB2Q96Q27 587 aa17.5■□□□□ 0.39
CDKN1B-201ENST00000228872 LRRC3Q9BY71 257 aa17.5■□□□□ 0.39
Retrieved 100 of 20,778 RNA–protein pairs in 55.1 ms