RNA–Protein interactions for RNA: ENST00000553300.5

HNRNPC-205, Transcript of heterogeneous nuclear ribonucleoprotein C (C1/C2), humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene HNRNPC, Length 1,375 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HNRNPC-205ENST00000553300 NVLO15381 856 aaKnown RBP12.97□□□□□ -0.33
HNRNPC-205ENST00000553300 DUX1O43812 170 aa12.97□□□□□ -0.33
HNRNPC-205ENST00000553300 NRDCO43847 1150 aa12.97□□□□□ -0.33
HNRNPC-205ENST00000553300 SNX2O60749 519 aa12.97□□□□□ -0.33
HNRNPC-205ENST00000553300 STIP1P31948 543 aaKnown RBP12.97□□□□□ -0.33
HNRNPC-205ENST00000553300 LIMK2P53671 638 aa12.97□□□□□ -0.33
HNRNPC-205ENST00000553300 EPHA4P54764 986 aa12.97□□□□□ -0.33
HNRNPC-205ENST00000553300 INSCQ1MX18 579 aa12.97□□□□□ -0.33
HNRNPC-205ENST00000553300 P3H1Q32P28 736 aa12.97□□□□□ -0.33
HNRNPC-205ENST00000553300 PHF19Q5T6S3 580 aa12.97□□□□□ -0.33
HNRNPC-205ENST00000553300 SEL1L2Q5TEA6 688 aa12.97□□□□□ -0.33
HNRNPC-205ENST00000553300 TMEM71Q6P5X7 295 aa12.97□□□□□ -0.33
HNRNPC-205ENST00000553300 WASH2PQ6VEQ5 465 aa12.97□□□□□ -0.33
HNRNPC-205ENST00000553300 ZNF662Q6ZS27 426 aa12.97□□□□□ -0.33
HNRNPC-205ENST00000553300 USP53Q70EK8 1073 aa12.97□□□□□ -0.33
HNRNPC-205ENST00000553300 KLHDC8BQ8IXV7 354 aa12.97□□□□□ -0.33
HNRNPC-205ENST00000553300 DDHD1Q8NEL9 900 aa12.97□□□□□ -0.33
HNRNPC-205ENST00000553300 FAM118BQ9BPY3 351 aa12.97□□□□□ -0.33
HNRNPC-205ENST00000553300 GORASP1Q9BQQ3 440 aa12.97□□□□□ -0.33
HNRNPC-205ENST00000553300 UCK1Q9HA47 277 aa12.97□□□□□ -0.33
HNRNPC-205ENST00000553300 RDH14Q9HBH5 336 aa12.97□□□□□ -0.33
HNRNPC-205ENST00000553300 ARFGAP3Q9NP61 516 aa12.97□□□□□ -0.33
HNRNPC-205ENST00000553300 WASH6PQ9NQA3 447 aa12.97□□□□□ -0.33
HNRNPC-205ENST00000553300 SMOXQ9NWM0 555 aa12.97□□□□□ -0.33
HNRNPC-205ENST00000553300 CPNE7Q9UBL6 633 aa12.97□□□□□ -0.33
HNRNPC-205ENST00000553300 ACSL6Q9UKU0 697 aa12.97□□□□□ -0.33
HNRNPC-205ENST00000553300 GUCA1BQ9UMX6 200 aa12.97□□□□□ -0.33
HNRNPC-205ENST00000553300 LOXL2Q9Y4K0 774 aa12.97□□□□□ -0.33
HNRNPC-205ENST00000553300 CAPN6Q9Y6Q1 641 aa12.97□□□□□ -0.33
HNRNPC-205ENST00000553300 IGSF10Q6WRI0 2623 aa12.97□□□□□ -0.33
HNRNPC-205ENST00000553300 TRBV23OR9-2A0A075B6M9 112 aa12.96□□□□□ -0.33
HNRNPC-205ENST00000553300 A0A0U1RQJ8 604 aa12.96□□□□□ -0.33
HNRNPC-205ENST00000553300 KLHL33A6NCF5 533 aa12.96□□□□□ -0.33
HNRNPC-205ENST00000553300 PSMD3O43242 534 aa12.96□□□□□ -0.33
HNRNPC-205ENST00000553300 EML2O95834 649 aa12.96□□□□□ -0.33
HNRNPC-205ENST00000553300 IDSP22304 550 aa12.96□□□□□ -0.33
HNRNPC-205ENST00000553300 HADHAP40939 763 aa12.96□□□□□ -0.33
HNRNPC-205ENST00000553300 CHRNA6Q15825 494 aa12.96□□□□□ -0.33
HNRNPC-205ENST00000553300 ZNF648Q5T619 568 aaPredicted RBP12.96□□□□□ -0.33
HNRNPC-205ENST00000553300 TMEM164Q5U3C3 297 aa12.96□□□□□ -0.33
HNRNPC-205ENST00000553300 AGAP9Q5VTM2 703 aa12.96□□□□□ -0.33
HNRNPC-205ENST00000553300 WDR74Q6RFH5 385 aaPredicted RBP12.96□□□□□ -0.33
HNRNPC-205ENST00000553300 CRTC3Q6UUV7 619 aa12.96□□□□□ -0.33
HNRNPC-205ENST00000553300 FAM151BQ6UXP7 276 aa12.96□□□□□ -0.33
HNRNPC-205ENST00000553300 ZNF574Q6ZN55 896 aaPredicted RBP12.96□□□□□ -0.33
HNRNPC-205ENST00000553300 TMPRSS9Q7Z410 1059 aa12.96□□□□□ -0.33
HNRNPC-205ENST00000553300 TRAPPC5Q8IUR0 188 aa12.96□□□□□ -0.33
HNRNPC-205ENST00000553300 RBM12BQ8IXT5 1001 aaKnown RBP12.96□□□□□ -0.33
HNRNPC-205ENST00000553300 SLC35B2Q8TB61 432 aa12.96□□□□□ -0.33
HNRNPC-205ENST00000553300 ZNF398Q8TD17 642 aa12.96□□□□□ -0.33
HNRNPC-205ENST00000553300 ALS2CR12Q96Q35 445 aa12.96□□□□□ -0.33
HNRNPC-205ENST00000553300 TBL1YQ9BQ87 522 aa12.96□□□□□ -0.33
HNRNPC-205ENST00000553300 NUDT22Q9BRQ3 303 aa12.96□□□□□ -0.33
HNRNPC-205ENST00000553300 SEMA6CQ9H3T2 930 aa12.96□□□□□ -0.33
HNRNPC-205ENST00000553300 OSGEPL1Q9H4B0 414 aa12.96□□□□□ -0.33
HNRNPC-205ENST00000553300 PRORYQ9H606 182 aa12.96□□□□□ -0.33
HNRNPC-205ENST00000553300 PDP2Q9P2J9 529 aa12.96□□□□□ -0.33
HNRNPC-205ENST00000553300 TMPRSS11EQ9UL52 423 aa12.96□□□□□ -0.33
HNRNPC-205ENST00000553300 SSUH2Q9Y2M2 353 aa12.96□□□□□ -0.33
HNRNPC-205ENST00000553300 IGHV5-10-1A0A0J9YXX1 117 aa12.95□□□□□ -0.34
HNRNPC-205ENST00000553300 PRR19A6NJB7 356 aa12.95□□□□□ -0.34
HNRNPC-205ENST00000553300 MTX2O75431 263 aa12.95□□□□□ -0.34
HNRNPC-205ENST00000553300 PRAMEF1O95521 474 aa12.95□□□□□ -0.34
HNRNPC-205ENST00000553300 CCDC175P0C221 793 aa12.95□□□□□ -0.34
HNRNPC-205ENST00000553300 CD82P27701 267 aa12.95□□□□□ -0.34
HNRNPC-205ENST00000553300 SLC5A2P31639 672 aa12.95□□□□□ -0.34
HNRNPC-205ENST00000553300 PPM1FP49593 454 aaPredicted RBP12.95□□□□□ -0.34
HNRNPC-205ENST00000553300 TMPRSS3P57727 454 aa12.95□□□□□ -0.34
HNRNPC-205ENST00000553300 LONRF2Q1L5Z9 754 aa12.95□□□□□ -0.34
HNRNPC-205ENST00000553300 ABRAXAS1Q6UWZ7 409 aa12.95□□□□□ -0.34
HNRNPC-205ENST00000553300 AMZ2Q86W34 360 aa12.95□□□□□ -0.34
HNRNPC-205ENST00000553300 JAMLQ86YT9 394 aa12.95□□□□□ -0.34
HNRNPC-205ENST00000553300 ZNF547Q8IVP9 402 aa12.95□□□□□ -0.34
HNRNPC-205ENST00000553300 FAM71DQ8N9W8 422 aa12.95□□□□□ -0.34
HNRNPC-205ENST00000553300 AGBL5Q8NDL9 886 aa12.95□□□□□ -0.34
HNRNPC-205ENST00000553300 OR4K2Q8NGD2 314 aa12.95□□□□□ -0.34
HNRNPC-205ENST00000553300 NAF1Q96HR8 494 aaKnown RBP12.95□□□□□ -0.34
HNRNPC-205ENST00000553300 LRRC40Q9H9A6 602 aa12.95□□□□□ -0.34
HNRNPC-205ENST00000553300 PRDM8Q9NQV8 689 aa12.95□□□□□ -0.34
HNRNPC-205ENST00000553300 EIF2AK3Q9NZJ5 1116 aaKnown RBP12.95□□□□□ -0.34
HNRNPC-205ENST00000553300 PISDQ9UG56 409 aa12.95□□□□□ -0.34
HNRNPC-205ENST00000553300 SLC23A2Q9UGH3 650 aa12.95□□□□□ -0.34
HNRNPC-205ENST00000553300 ARL5AQ9Y689 179 aa12.95□□□□□ -0.34
HNRNPC-205ENST00000553300 LOC400499M0QZD8 3231 aa12.95□□□□□ -0.34
HNRNPC-205ENST00000553300 LILRA5A6NI73 299 aa12.94□□□□□ -0.34
HNRNPC-205ENST00000553300 ERI2A8K979 691 aaKnown RBP12.94□□□□□ -0.34
HNRNPC-205ENST00000553300 PDZK1P1A8MUH7 402 aa12.94□□□□□ -0.34
HNRNPC-205ENST00000553300 KLK10O43240 276 aa12.94□□□□□ -0.34
HNRNPC-205ENST00000553300 BUD23O43709 281 aaKnown RBP12.94□□□□□ -0.34
HNRNPC-205ENST00000553300 UGT1A9O60656 530 aa12.94□□□□□ -0.34
HNRNPC-205ENST00000553300 SRP72O76094 671 aaKnown RBP12.94□□□□□ -0.34
HNRNPC-205ENST00000553300 VIPP01282 170 aa12.94□□□□□ -0.34
HNRNPC-205ENST00000553300 THRAP10827 490 aa12.94□□□□□ -0.34
HNRNPC-205ENST00000553300 RALBP11234 206 aa12.94□□□□□ -0.34
HNRNPC-205ENST00000553300 HGFP14210 728 aa12.94□□□□□ -0.34
HNRNPC-205ENST00000553300 HOXB3P14651 431 aaPredicted RBP12.94□□□□□ -0.34
HNRNPC-205ENST00000553300 UGT1A6P19224 532 aa12.94□□□□□ -0.34
HNRNPC-205ENST00000553300 UGT1A1P22309 533 aa12.94□□□□□ -0.34
HNRNPC-205ENST00000553300 UGT1A4P22310 534 aa12.94□□□□□ -0.34
HNRNPC-205ENST00000553300 CSTF2P33240 577 aaKnown RBP eCLIP12.94□□□□□ -0.342e-10■■□□□ 11.7
Retrieved 100 of 20,778 RNA–protein pairs in 34.3 ms