RNA–Protein interactions for RNA: ENST00000513450.1

RNF4-219, Transcript of ring finger protein 4, humanhuman

TSL 5

Gene RNF4, Length 416 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNF4-219ENST00000513450 FIG4Q92562 907 aa2.28□□□□□ -2.04
RNF4-219ENST00000513450 SLC22A18Q96BI1 424 aa2.28□□□□□ -2.04
RNF4-219ENST00000513450 NEUROD6Q96NK8 337 aa2.28□□□□□ -2.04
RNF4-219ENST00000513450 NEURL2Q9BR09 285 aa2.28□□□□□ -2.04
RNF4-219ENST00000513450 MXD3Q9BW11 206 aa2.28□□□□□ -2.04
RNF4-219ENST00000513450 RTN4RQ9BZR6 473 aa2.28□□□□□ -2.04
RNF4-219ENST00000513450 RAD21L1Q9H4I0 556 aa2.28□□□□□ -2.04
RNF4-219ENST00000513450 DENND2DQ9H6A0 471 aaPredicted RBP2.28□□□□□ -2.04
RNF4-219ENST00000513450 DNAJC18Q9H819 358 aa2.28□□□□□ -2.04
RNF4-219ENST00000513450 DDX31Q9H8H2 851 aaKnown RBP2.28□□□□□ -2.04
RNF4-219ENST00000513450 UBTD1Q9HAC8 227 aa2.28□□□□□ -2.04
RNF4-219ENST00000513450 EBF2Q9HAK2 575 aa2.28□□□□□ -2.04
RNF4-219ENST00000513450 EXOSC5Q9NQT4 235 aaKnown RBP eCLIP2.28□□□□□ -2.04
RNF4-219ENST00000513450 ANKEF1Q9NU02 776 aa2.28□□□□□ -2.04
RNF4-219ENST00000513450 CLIC5Q9NZA1 410 aa2.28□□□□□ -2.04
RNF4-219ENST00000513450 MARCH4Q9P2E8 410 aaPredicted RBP2.28□□□□□ -2.04
RNF4-219ENST00000513450 GAGE2DQ9UEU5 116 aa2.28□□□□□ -2.04
RNF4-219ENST00000513450 CHORDC1Q9UHD1 332 aaPredicted RBP2.28□□□□□ -2.04
RNF4-219ENST00000513450 AMACRQ9UHK6 382 aa2.28□□□□□ -2.04
RNF4-219ENST00000513450 PADI1Q9ULC6 663 aa2.28□□□□□ -2.04
RNF4-219ENST00000513450 PADI3Q9ULW8 664 aa2.28□□□□□ -2.04
RNF4-219ENST00000513450 PLAGL1Q9UM63 463 aa2.28□□□□□ -2.04
RNF4-219ENST00000513450 PTRH2Q9Y3E5 179 aaKnown RBP2.28□□□□□ -2.04
RNF4-219ENST00000513450 TTC3P53804 2025 aa2.28□□□□□ -2.04
RNF4-219ENST00000513450 CGNL1Q0VF96 1302 aa2.27□□□□□ -2.05
RNF4-219ENST00000513450 ZNF541Q9H0D2 1346 aa2.27□□□□□ -2.05
RNF4-219ENST00000513450 LOC102723996A0A087X1L8 192 aa2.27□□□□□ -2.05
RNF4-219ENST00000513450 A0A0G2JPF8 293 aa2.27□□□□□ -2.05
RNF4-219ENST00000513450 C4orf47A7E2U8 309 aa2.27□□□□□ -2.05
RNF4-219ENST00000513450 HNRNPCL2B2RXH8 293 aa2.27□□□□□ -2.05
RNF4-219ENST00000513450 ANKRD66B4E2M5 251 aa2.27□□□□□ -2.05
RNF4-219ENST00000513450 HNRNPCL3B7ZW38 293 aa2.27□□□□□ -2.05
RNF4-219ENST00000513450 ZNF587BE7ETH6 402 aa2.27□□□□□ -2.05
RNF4-219ENST00000513450 J3QR06 171 aa2.27□□□□□ -2.05
RNF4-219ENST00000513450 SH2B2O14492 632 aaPredicted RBP2.27□□□□□ -2.05
RNF4-219ENST00000513450 ADAMDEC1O15204 470 aa2.27□□□□□ -2.05
RNF4-219ENST00000513450 SLC16A5O15375 505 aa2.27□□□□□ -2.05
RNF4-219ENST00000513450 TIMM44O43615 452 aa2.27□□□□□ -2.05
RNF4-219ENST00000513450 PLPP2O43688 288 aa2.27□□□□□ -2.05
RNF4-219ENST00000513450 ZNF217O75362 1048 aa2.27□□□□□ -2.05
RNF4-219ENST00000513450 RSL1D1O76021 490 aaKnown RBP2.27□□□□□ -2.05
RNF4-219ENST00000513450 KCNK5O95279 499 aa2.27□□□□□ -2.05
RNF4-219ENST00000513450 TPOP07202 933 aa2.27□□□□□ -2.05
RNF4-219ENST00000513450 FAM106CPP0CH98 169 aa2.27□□□□□ -2.05
RNF4-219ENST00000513450 HNRNPCL4P0DMR1 293 aa2.27□□□□□ -2.05
RNF4-219ENST00000513450 FGF3P11487 239 aaPredicted RBP2.27□□□□□ -2.05
RNF4-219ENST00000513450 AKR1B1P15121 316 aa2.27□□□□□ -2.05
RNF4-219ENST00000513450 MYOD1P15172 320 aa2.27□□□□□ -2.05
RNF4-219ENST00000513450 PRLRP16471 622 aa2.27□□□□□ -2.05
RNF4-219ENST00000513450 ZNF23P17027 643 aa2.27□□□□□ -2.05
RNF4-219ENST00000513450 POLR2CP19387 275 aaPredicted RBP2.27□□□□□ -2.05
RNF4-219ENST00000513450 TRIM21P19474 475 aaKnown RBP2.27□□□□□ -2.05
RNF4-219ENST00000513450 NR2F2P24468 414 aa2.27□□□□□ -2.05
RNF4-219ENST00000513450 GNL1P36915 607 aaPredicted RBP2.27□□□□□ -2.05
RNF4-219ENST00000513450 SUOXP51687 545 aa2.27□□□□□ -2.05
RNF4-219ENST00000513450 SIRPAP78324 504 aa2.27□□□□□ -2.05
RNF4-219ENST00000513450 IFI35P80217 286 aaPredicted RBP2.27□□□□□ -2.05
RNF4-219ENST00000513450 RELQ04864 619 aaPredicted RBP2.27□□□□□ -2.05
RNF4-219ENST00000513450 CALD1Q05682 793 aaKnown RBP2.27□□□□□ -2.05
RNF4-219ENST00000513450 SLC20A2Q08357 652 aa2.27□□□□□ -2.05
RNF4-219ENST00000513450 ZNF234Q14588 700 aa2.27□□□□□ -2.05
RNF4-219ENST00000513450 DLG2Q15700 870 aa2.27□□□□□ -2.05
RNF4-219ENST00000513450 ASIC2Q16515 512 aa2.27□□□□□ -2.05
RNF4-219ENST00000513450 RAB6CQ53S08 254 aa2.27□□□□□ -2.05
RNF4-219ENST00000513450 MFSD4BQ5TF39 518 aa2.27□□□□□ -2.05
RNF4-219ENST00000513450 C9orf57Q5W0N0 161 aa2.27□□□□□ -2.05
RNF4-219ENST00000513450 ZNF324BQ6AW86 544 aaPredicted RBP2.27□□□□□ -2.05
RNF4-219ENST00000513450 GPR139Q6DWJ6 353 aa2.27□□□□□ -2.05
RNF4-219ENST00000513450 DHRS7BQ6IAN0 325 aaPredicted RBP2.27□□□□□ -2.05
RNF4-219ENST00000513450 GFRALQ6UXV0 394 aa2.27□□□□□ -2.05
RNF4-219ENST00000513450 UNQ6126/PRO20091Q6UXV3 157 aa2.27□□□□□ -2.05
RNF4-219ENST00000513450 PLEKHM3Q6ZWE6 761 aa2.27□□□□□ -2.05
RNF4-219ENST00000513450 TUBA1AQ71U36 451 aa2.27□□□□□ -2.05
RNF4-219ENST00000513450 INTS8Q75QN2 995 aaKnown RBP2.27□□□□□ -2.05
RNF4-219ENST00000513450 ZNF534Q76KX8 674 aa2.27□□□□□ -2.05
RNF4-219ENST00000513450 ATG9AQ7Z3C6 839 aa2.27□□□□□ -2.05
RNF4-219ENST00000513450 ARMC9Q7Z3E5 817 aa2.27□□□□□ -2.05
RNF4-219ENST00000513450 SATL1Q86VE3 508 aa2.27□□□□□ -2.05
RNF4-219ENST00000513450 TMEM219Q86XT9 240 aa2.27□□□□□ -2.05
RNF4-219ENST00000513450 DNAAF5Q86Y56 855 aa2.27□□□□□ -2.05
RNF4-219ENST00000513450 CEP97Q8IW35 865 aa2.27□□□□□ -2.05
RNF4-219ENST00000513450 SUPV3L1Q8IYB8 786 aaKnown RBP eCLIP2.27□□□□□ -2.05
RNF4-219ENST00000513450 NME8Q8N427 588 aa2.27□□□□□ -2.05
RNF4-219ENST00000513450 MINDY1Q8N5J2 469 aa2.27□□□□□ -2.05
RNF4-219ENST00000513450 LSMEM1Q8N8F7 131 aa2.27□□□□□ -2.05
RNF4-219ENST00000513450 SYT2Q8N9I0 419 aaPredicted RBP2.27□□□□□ -2.05
RNF4-219ENST00000513450 AVL9Q8NBF6 648 aa2.27□□□□□ -2.05
RNF4-219ENST00000513450 SMRP1Q8NCR6 262 aa2.27□□□□□ -2.05
RNF4-219ENST00000513450 ACVR1CQ8NER5 493 aa2.27□□□□□ -2.05
RNF4-219ENST00000513450 APPL2Q8NEU8 664 aa2.27□□□□□ -2.05
RNF4-219ENST00000513450 HMGCLL1Q8TB92 370 aa2.27□□□□□ -2.05
RNF4-219ENST00000513450 DUSP19Q8WTR2 217 aa2.27□□□□□ -2.05
RNF4-219ENST00000513450 PTPMT1Q8WUK0 201 aaPredicted RBP2.27□□□□□ -2.05
RNF4-219ENST00000513450 SLC20A1Q8WUM9 679 aa2.27□□□□□ -2.05
RNF4-219ENST00000513450 SLC44A1Q8WWI5 657 aa2.27□□□□□ -2.05
RNF4-219ENST00000513450 ZNF622Q969S3 477 aaKnown RBP eCLIP2.27□□□□□ -2.05
RNF4-219ENST00000513450 IGSF21Q96ID5 467 aa2.27□□□□□ -2.05
RNF4-219ENST00000513450 SERINC2Q96SA4 455 aa2.27□□□□□ -2.05
RNF4-219ENST00000513450 PAFAH2Q99487 392 aa2.27□□□□□ -2.05
RNF4-219ENST00000513450 GFI1Q99684 422 aa2.27□□□□□ -2.05
Retrieved 100 of 20,778 RNA–protein pairs in 31.4 ms