RNA–Protein interactions for RNA: ENST00000461507.5

FDPS-204, Transcript of farnesyl diphosphate synthase, human

TSL 2

Gene FDPS, Length 1,022 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
FDPS-204	ENST00000461507	HOMER3	Q9NSC5	361 aa		12.58	□□□□□ -0.4
FDPS-204	ENST00000461507	SPATS2L	Q9NUQ6	558 aa	Known RBP	12.58	□□□□□ -0.4
FDPS-204	ENST00000461507	IGF2BP1	Q9NZI8	577 aa	Known RBP eCLIP	12.58	□□□□□ -0.4
FDPS-204	ENST00000461507	SUFU	Q9UMX1	484 aa		12.58	□□□□□ -0.4
FDPS-204	ENST00000461507	SNX12	Q9UMY4	172 aa		12.58	□□□□□ -0.4
FDPS-204	ENST00000461507	ZKSCAN5	Q9Y2L8	839 aa		12.58	□□□□□ -0.4
FDPS-204	ENST00000461507	ST14	Q9Y5Y6	855 aa		12.58	□□□□□ -0.4
FDPS-204	ENST00000461507	ARL5A	Q9Y689	179 aa		12.58	□□□□□ -0.4
FDPS-204	ENST00000461507	CTAGE9	A4FU28	777 aa		12.57	□□□□□ -0.4
FDPS-204	ENST00000461507	EIF4E1B	A6NMX2	242 aa	Known RBP	12.57	□□□□□ -0.4
FDPS-204	ENST00000461507	ZNF185	O15231	689 aa		12.57	□□□□□ -0.4
FDPS-204	ENST00000461507	MTX2	O75431	263 aa		12.57	□□□□□ -0.4
FDPS-204	ENST00000461507	CRTAM	O95727	393 aa		12.57	□□□□□ -0.4
FDPS-204	ENST00000461507	AP2A1	O95782	977 aa		12.57	□□□□□ -0.4
FDPS-204	ENST00000461507	APRT	P07741	180 aa		12.57	□□□□□ -0.4
FDPS-204	ENST00000461507	LPO	P22079	712 aa	Predicted RBP	12.57	□□□□□ -0.4
FDPS-204	ENST00000461507	PPM1F	P49593	454 aa	Predicted RBP	12.57	□□□□□ -0.4
FDPS-204	ENST00000461507	VAC14	Q08AM6	782 aa		12.57	□□□□□ -0.4
FDPS-204	ENST00000461507	GTF2H3	Q13889	308 aa		12.57	□□□□□ -0.4
FDPS-204	ENST00000461507	PTPRCAP	Q14761	206 aa		12.57	□□□□□ -0.4
FDPS-204	ENST00000461507	POU6F1	Q14863	301 aa		12.57	□□□□□ -0.4
FDPS-204	ENST00000461507	PLA2G4E	Q3MJ16	856 aa		12.57	□□□□□ -0.4
FDPS-204	ENST00000461507	ZNF648	Q5T619	568 aa	Predicted RBP	12.57	□□□□□ -0.4
FDPS-204	ENST00000461507	SLC30A9	Q6PML9	568 aa		12.57	□□□□□ -0.4
FDPS-204	ENST00000461507	LINC00523	Q86TU6	105 aa		12.57	□□□□□ -0.4
FDPS-204	ENST00000461507	FBXO39	Q8N4B4	442 aa		12.57	□□□□□ -0.4
FDPS-204	ENST00000461507	TTC30B	Q8N4P2	665 aa		12.57	□□□□□ -0.4
FDPS-204	ENST00000461507	TRAM1L1	Q8N609	369 aa		12.57	□□□□□ -0.4
FDPS-204	ENST00000461507	OR4K2	Q8NGD2	314 aa		12.57	□□□□□ -0.4
FDPS-204	ENST00000461507	TTC9	Q92623	222 aa		12.57	□□□□□ -0.4
FDPS-204	ENST00000461507	EID2B	Q96D98	161 aa		12.57	□□□□□ -0.4
FDPS-204	ENST00000461507	COX14	Q96I36	57 aa		12.57	□□□□□ -0.4
FDPS-204	ENST00000461507	OR2M4	Q96R27	311 aa		12.57	□□□□□ -0.4
FDPS-204	ENST00000461507	NAPG	Q99747	312 aa	Predicted RBP	12.57	□□□□□ -0.4
FDPS-204	ENST00000461507	FOXP3	Q9BZS1	431 aa		12.57	□□□□□ -0.4
FDPS-204	ENST00000461507	B3GNT4	Q9C0J1	378 aa		12.57	□□□□□ -0.4
FDPS-204	ENST00000461507	CDH19	Q9H159	772 aa		12.57	□□□□□ -0.4
FDPS-204	ENST00000461507	DPEP2	Q9H4A9	486 aa		12.57	□□□□□ -0.4
FDPS-204	ENST00000461507	TAAR2	Q9P1P5	351 aa		12.57	□□□□□ -0.4
FDPS-204	ENST00000461507	LRIT1	Q9P2V4	623 aa		12.57	□□□□□ -0.4
FDPS-204	ENST00000461507	ZNHIT2	Q9UHR6	403 aa		12.57	□□□□□ -0.4
FDPS-204	ENST00000461507	ATXN7L1	Q9ULK2	861 aa	Predicted RBP	12.57	□□□□□ -0.4
FDPS-204	ENST00000461507	TTC7A	Q9ULT0	858 aa	Predicted RBP	12.57	□□□□□ -0.4
FDPS-204	ENST00000461507	PRKAB1	Q9Y478	270 aa		12.57	□□□□□ -0.4
FDPS-204	ENST00000461507	GLYATL1P3	A0A0U1RQE8	302 aa		12.56	□□□□□ -0.4
FDPS-204	ENST00000461507		K7ENP7	123 aa		12.56	□□□□□ -0.4
FDPS-204	ENST00000461507	NVL	O15381	856 aa	Known RBP	12.56	□□□□□ -0.4
FDPS-204	ENST00000461507	PRB1	P04280	392 aa		12.56	□□□□□ -0.4
FDPS-204	ENST00000461507	TCP1	P17987	556 aa	Known RBP	12.56	□□□□□ -0.4
FDPS-204	ENST00000461507	SLC5A2	P31639	672 aa		12.56	□□□□□ -0.4
FDPS-204	ENST00000461507	AKT1	P31749	480 aa		12.56	□□□□□ -0.4
FDPS-204	ENST00000461507	RPL22	P35268	128 aa	Known RBP	12.56	□□□□□ -0.4
FDPS-204	ENST00000461507	ADRA1A	P35348	466 aa		12.56	□□□□□ -0.4
FDPS-204	ENST00000461507	HMGCL	P35914	325 aa		12.56	□□□□□ -0.4
FDPS-204	ENST00000461507	MAZ	P56270	477 aa	Known RBP	12.56	□□□□□ -0.4
FDPS-204	ENST00000461507	DCDC1	P59894	354 aa		12.56	□□□□□ -0.4
FDPS-204	ENST00000461507	CTBS	Q01459	385 aa		12.56	□□□□□ -0.4
FDPS-204	ENST00000461507	PEX6	Q13608	980 aa		12.56	□□□□□ -0.4
FDPS-204	ENST00000461507	TAF1A	Q15573	450 aa	Predicted RBP	12.56	□□□□□ -0.4
FDPS-204	ENST00000461507	ZDHHC20	Q5W0Z9	365 aa		12.56	□□□□□ -0.4
FDPS-204	ENST00000461507	INO80C	Q6PI98	192 aa	Predicted RBP	12.56	□□□□□ -0.4
FDPS-204	ENST00000461507	CRTC3	Q6UUV7	619 aa		12.56	□□□□□ -0.4
FDPS-204	ENST00000461507	RANBP10	Q6VN20	620 aa		12.56	□□□□□ -0.4
FDPS-204	ENST00000461507	CHST15	Q7LFX5	561 aa	Predicted RBP	12.56	□□□□□ -0.4
FDPS-204	ENST00000461507	TMPRSS9	Q7Z410	1059 aa		12.56	□□□□□ -0.4
FDPS-204	ENST00000461507	NAGS	Q8N159	534 aa		12.56	□□□□□ -0.4
FDPS-204	ENST00000461507	PRELID2	Q8N945	189 aa		12.56	□□□□□ -0.4
FDPS-204	ENST00000461507	GLIS1	Q8NBF1	620 aa		12.56	□□□□□ -0.4
FDPS-204	ENST00000461507	OR52K1	Q8NGK4	314 aa		12.56	□□□□□ -0.4
FDPS-204	ENST00000461507	ZDHHC1	Q8WTX9	485 aa		12.56	□□□□□ -0.4
FDPS-204	ENST00000461507	RTP4	Q96DX8	246 aa		12.56	□□□□□ -0.4
FDPS-204	ENST00000461507	TTC25	Q96NG3	672 aa		12.56	□□□□□ -0.4
FDPS-204	ENST00000461507	PLEKHG4B	Q96PX9	1271 aa		12.56	□□□□□ -0.4
FDPS-204	ENST00000461507	WDR24	Q96S15	920 aa		12.56	□□□□□ -0.4
FDPS-204	ENST00000461507	OR2AG1	Q9H205	316 aa		12.56	□□□□□ -0.4
FDPS-204	ENST00000461507	FKBPL	Q9UIM3	349 aa		12.56	□□□□□ -0.4
FDPS-204	ENST00000461507	LOXL2	Q9Y4K0	774 aa		12.56	□□□□□ -0.4
FDPS-204	ENST00000461507	KCTD3	Q9Y597	815 aa		12.56	□□□□□ -0.4
FDPS-204	ENST00000461507	OAS3	Q9Y6K5	1087 aa	Known RBP	12.56	□□□□□ -0.4
FDPS-204	ENST00000461507	CCL22	O00626	93 aa		12.55	□□□□□ -0.4
FDPS-204	ENST00000461507	GPR39	O43194	453 aa		12.55	□□□□□ -0.4
FDPS-204	ENST00000461507	B4GAT1	O43505	415 aa		12.55	□□□□□ -0.4
FDPS-204	ENST00000461507	PRAMEF1	O95521	474 aa		12.55	□□□□□ -0.4
FDPS-204	ENST00000461507	CPNE6	O95741	557 aa		12.55	□□□□□ -0.4
FDPS-204	ENST00000461507	HGF	P14210	728 aa		12.55	□□□□□ -0.4
FDPS-204	ENST00000461507	AK4	P27144	223 aa	Predicted RBP	12.55	□□□□□ -0.4
FDPS-204	ENST00000461507	ADCY8	P40145	1251 aa		12.55	□□□□□ -0.4
FDPS-204	ENST00000461507	ACTR1B	P42025	376 aa		12.55	□□□□□ -0.4
FDPS-204	ENST00000461507	GPR3	P46089	330 aa		12.55	□□□□□ -0.4
FDPS-204	ENST00000461507	ACTR1A	P61163	376 aa		12.55	□□□□□ -0.4
FDPS-204	ENST00000461507	PDE1B	Q01064	536 aa		12.55	□□□□□ -0.4
FDPS-204	ENST00000461507	C19orf57	Q0VDD7	668 aa		12.55	□□□□□ -0.4
FDPS-204	ENST00000461507	CDH17	Q12864	832 aa		12.55	□□□□□ -0.4
FDPS-204	ENST00000461507	SQSTM1	Q13501	440 aa		12.55	□□□□□ -0.4
FDPS-204	ENST00000461507	ITGA9	Q13797	1035 aa		12.55	□□□□□ -0.4
FDPS-204	ENST00000461507	LRP8	Q14114	963 aa		12.55	□□□□□ -0.4
FDPS-204	ENST00000461507	CHRNA6	Q15825	494 aa		12.55	□□□□□ -0.4
FDPS-204	ENST00000461507	ATP13A5	Q4VNC0	1218 aa		12.55	□□□□□ -0.4
FDPS-204	ENST00000461507	ARHGAP40	Q5TG30	622 aa		12.55	□□□□□ -0.4
FDPS-204	ENST00000461507	FOXR1	Q6PIV2	292 aa		12.55	□□□□□ -0.4

Retrieved 100 of 20,778 RNA–protein pairs in 74.1 ms