RNA–Protein interactions for RNA: ENST00000452448.6

EPHA3-202, Transcript of EPH receptor A3, humanhuman

TSL 1 (best) BASIC

Gene EPHA3, Length 2,546 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
EPHA3-202ENST00000452448 USP12O75317 370 aa4.93□□□□□ -1.62
EPHA3-202ENST00000452448 SULT1C4O75897 302 aa4.93□□□□□ -1.62
EPHA3-202ENST00000452448 PRKCBP05771 671 aa4.93□□□□□ -1.62
EPHA3-202ENST00000452448 TPOP07202 933 aa4.93□□□□□ -1.62
EPHA3-202ENST00000452448 FBLN1P23142 703 aa4.93□□□□□ -1.62
EPHA3-202ENST00000452448 MSX1P28360 303 aa4.93□□□□□ -1.62
EPHA3-202ENST00000452448 OR1E1P30953 314 aa4.93□□□□□ -1.62
EPHA3-202ENST00000452448 THBS2P35442 1172 aa4.93□□□□□ -1.62
EPHA3-202ENST00000452448 BTDP43251 543 aa4.93□□□□□ -1.62
EPHA3-202ENST00000452448 CDKN1BP46527 198 aa4.93□□□□□ -1.62
EPHA3-202ENST00000452448 LEPRP48357 1165 aaKnown RBP4.93□□□□□ -1.62
EPHA3-202ENST00000452448 RAB13P51153 203 aa4.93□□□□□ -1.62
EPHA3-202ENST00000452448 TPMTP51580 245 aa4.93□□□□□ -1.62
EPHA3-202ENST00000452448 C21orf59P57076 290 aa4.93□□□□□ -1.62
EPHA3-202ENST00000452448 PSMA6P60900 246 aaKnown RBP4.93□□□□□ -1.62
EPHA3-202ENST00000452448 GMFBP60983 142 aa4.93□□□□□ -1.62
EPHA3-202ENST00000452448 VAMP2P63027 116 aa4.93□□□□□ -1.62
EPHA3-202ENST00000452448 ILF3Q12906 894 aaKnown RBP eCLIP4.93□□□□□ -1.62
EPHA3-202ENST00000452448 SMCO1Q147U7 214 aa4.93□□□□□ -1.62
EPHA3-202ENST00000452448 SMAD2Q15796 467 aaKnown RBP4.93□□□□□ -1.62
EPHA3-202ENST00000452448 SLC5A12Q1EHB4 618 aa4.93□□□□□ -1.62
EPHA3-202ENST00000452448 LRRC36Q1X8D7 754 aa4.93□□□□□ -1.62
EPHA3-202ENST00000452448 ZNF829Q3KNS6 432 aaPredicted RBP4.93□□□□□ -1.62
EPHA3-202ENST00000452448 SV2CQ496J9 727 aa4.93□□□□□ -1.62
EPHA3-202ENST00000452448 ESCO2Q56NI9 601 aa4.93□□□□□ -1.62
EPHA3-202ENST00000452448 ZNF311Q5JNZ3 666 aa4.93□□□□□ -1.62
EPHA3-202ENST00000452448 TOR2AQ5JU69 321 aa4.93□□□□□ -1.62
EPHA3-202ENST00000452448 SPRYD7Q5W111 196 aa4.93□□□□□ -1.62
EPHA3-202ENST00000452448 TRAT1Q6PIZ9 186 aa4.93□□□□□ -1.62
EPHA3-202ENST00000452448 GPRIN3Q6ZVF9 776 aa4.93□□□□□ -1.62
EPHA3-202ENST00000452448 GDPD3Q7L5L3 318 aa4.93□□□□□ -1.62
EPHA3-202ENST00000452448 ZC3HAV1Q7Z2W4 902 aaKnown RBP4.93□□□□□ -1.62
EPHA3-202ENST00000452448 ZNF438Q7Z4V0 828 aa4.93□□□□□ -1.62
EPHA3-202ENST00000452448 AACSQ86V21 672 aa4.93□□□□□ -1.62
EPHA3-202ENST00000452448 SEPT12Q8IYM1 358 aa4.93□□□□□ -1.62
EPHA3-202ENST00000452448 PCDH20Q8N6Y1 951 aaKnown RBP4.93□□□□□ -1.62
EPHA3-202ENST00000452448 ZNF596Q8TC21 504 aa4.93□□□□□ -1.62
EPHA3-202ENST00000452448 PIWIL2Q8TC59 973 aaKnown RBP4.93□□□□□ -1.62
EPHA3-202ENST00000452448 GDPD5Q8WTR4 605 aa4.93□□□□□ -1.62
EPHA3-202ENST00000452448 PYDC1Q8WXC3 89 aa4.93□□□□□ -1.62
EPHA3-202ENST00000452448 FIG4Q92562 907 aa4.93□□□□□ -1.62
EPHA3-202ENST00000452448 SLC25A36Q96CQ1 311 aa4.93□□□□□ -1.62
EPHA3-202ENST00000452448 SPATA13Q96N96 652 aa4.93□□□□□ -1.62
EPHA3-202ENST00000452448 CDK15Q96Q40 435 aa4.93□□□□□ -1.62
EPHA3-202ENST00000452448 DMRTA2Q96SC8 542 aa4.93□□□□□ -1.62
EPHA3-202ENST00000452448 ZFYVE21Q9BQ24 234 aa4.93□□□□□ -1.62
EPHA3-202ENST00000452448 SEMA4CQ9C0C4 833 aa4.93□□□□□ -1.62
EPHA3-202ENST00000452448 RAB17Q9H0T7 212 aa4.93□□□□□ -1.62
EPHA3-202ENST00000452448 OPA3Q9H6K4 179 aa4.93□□□□□ -1.62
EPHA3-202ENST00000452448 FOLH1BQ9HBA9 442 aa4.93□□□□□ -1.62
EPHA3-202ENST00000452448 GLOD4Q9HC38 313 aa4.93□□□□□ -1.62
EPHA3-202ENST00000452448 ARHGEF3Q9NR81 526 aa4.93□□□□□ -1.62
EPHA3-202ENST00000452448 NDE1Q9NXR1 346 aa4.93□□□□□ -1.62
EPHA3-202ENST00000452448 DDX43Q9NXZ2 648 aaKnown RBP4.93□□□□□ -1.62
EPHA3-202ENST00000452448 GDE1Q9NZC3 331 aa4.93□□□□□ -1.62
EPHA3-202ENST00000452448 GRHL1Q9NZI5 618 aa4.93□□□□□ -1.62
EPHA3-202ENST00000452448 ZFR2Q9UPR6 939 aaKnown RBP4.93□□□□□ -1.62
EPHA3-202ENST00000452448 SNX24Q9Y343 169 aa4.93□□□□□ -1.62
EPHA3-202ENST00000452448 SPATA31A3Q5VYP0 1347 aa4.93□□□□□ -1.62
EPHA3-202ENST00000452448 USP42Q9H9J4 1324 aaKnown RBP4.93□□□□□ -1.62
EPHA3-202ENST00000452448 SLIT2O94813 1529 aa4.93□□□□□ -1.62
EPHA3-202ENST00000452448 METP08581 1390 aa4.93□□□□□ -1.62
EPHA3-202ENST00000452448 NALCNQ8IZF0 1738 aa4.93□□□□□ -1.62
EPHA3-202ENST00000452448 LRRC37A3O60309 1634 aa4.93□□□□□ -1.62
EPHA3-202ENST00000452448 GNG14A0A1W2PPG7 69 aa4.93□□□□□ -1.62
EPHA3-202ENST00000452448 A0A1W2PRV1 198 aa4.93□□□□□ -1.62
EPHA3-202ENST00000452448 EFCAB7A8K855 629 aa4.93□□□□□ -1.62
EPHA3-202ENST00000452448 FAM227AF5H4B4 570 aa4.93□□□□□ -1.62
EPHA3-202ENST00000452448 PODXLO00592 558 aa4.93□□□□□ -1.62
EPHA3-202ENST00000452448 TBC1D4O60343 1298 aa4.93□□□□□ -1.62
EPHA3-202ENST00000452448 TMEM63AO94886 807 aa4.93□□□□□ -1.62
EPHA3-202ENST00000452448 SUN1O94901 812 aa4.93□□□□□ -1.62
EPHA3-202ENST00000452448 ZIC2O95409 532 aaPredicted RBP4.93□□□□□ -1.62
EPHA3-202ENST00000452448 SERPINB2P05120 415 aa4.93□□□□□ -1.62
EPHA3-202ENST00000452448 PLA2G4BP0C869 781 aa4.93□□□□□ -1.62
EPHA3-202ENST00000452448 EIF2AK2P19525 551 aaKnown RBP4.93□□□□□ -1.62
EPHA3-202ENST00000452448 PCSK6P29122 969 aa4.93□□□□□ -1.62
EPHA3-202ENST00000452448 IGFALSP35858 605 aa4.93□□□□□ -1.62
EPHA3-202ENST00000452448 SLC1A6P48664 564 aa4.93□□□□□ -1.62
EPHA3-202ENST00000452448 DGKQP52824 942 aa4.93□□□□□ -1.62
EPHA3-202ENST00000452448 NAGLUP54802 743 aa4.93□□□□□ -1.62
EPHA3-202ENST00000452448 ARL4CP56559 192 aa4.93□□□□□ -1.62
EPHA3-202ENST00000452448 FOLH1Q04609 750 aa4.93□□□□□ -1.62
EPHA3-202ENST00000452448 GRIN1Q05586 938 aa4.93□□□□□ -1.62
EPHA3-202ENST00000452448 VEZF1Q14119 521 aa4.93□□□□□ -1.62
EPHA3-202ENST00000452448 MESDQ14696 234 aa4.93□□□□□ -1.62
EPHA3-202ENST00000452448 CCDC6Q16204 474 aa4.93□□□□□ -1.62
EPHA3-202ENST00000452448 CAMK4Q16566 473 aa4.93□□□□□ -1.62
EPHA3-202ENST00000452448 HSF5Q4G112 596 aaPredicted RBP4.93□□□□□ -1.62
EPHA3-202ENST00000452448 TMEM35AQ53FP2 167 aa4.93□□□□□ -1.62
EPHA3-202ENST00000452448 TRIM61Q5EBN2 209 aa4.93□□□□□ -1.62
EPHA3-202ENST00000452448 ATXN7L2Q5T6C5 722 aaPredicted RBP4.93□□□□□ -1.62
EPHA3-202ENST00000452448 COL13A1Q5TAT6 717 aaPredicted RBP4.93□□□□□ -1.62
EPHA3-202ENST00000452448 ZNF697Q5TEC3 545 aa4.93□□□□□ -1.62
EPHA3-202ENST00000452448 MEDAGQ5VYS4 303 aa4.93□□□□□ -1.62
EPHA3-202ENST00000452448 OR5M10Q6IEU7 315 aa4.93□□□□□ -1.62
EPHA3-202ENST00000452448 KIAA1161Q6NSJ0 714 aa4.93□□□□□ -1.62
EPHA3-202ENST00000452448 CNKSR3Q6P9H4 555 aa4.93□□□□□ -1.62
EPHA3-202ENST00000452448 ERI1Q8IV48 349 aaKnown RBP4.93□□□□□ -1.62
EPHA3-202ENST00000452448 RASGRP3Q8IV61 690 aa4.93□□□□□ -1.62
Retrieved 100 of 20,778 RNA–protein pairs in 71.5 ms