RNA–Protein interactions for RNA: ENST00000368021.7

USF1-203, Transcript of upstream transcription factor 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene USF1, Length 1,807 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USF1-203ENST00000368021 CPLX4Q7Z7G2 160 aa11.96□□□□□ -0.49
USF1-203ENST00000368021 LRRC34Q8IZ02 419 aa11.96□□□□□ -0.49
USF1-203ENST00000368021 CHPFQ8IZ52 775 aa11.96□□□□□ -0.49
USF1-203ENST00000368021 ZNF398Q8TD17 642 aa11.96□□□□□ -0.49
USF1-203ENST00000368021 ACOX2Q99424 681 aa11.96□□□□□ -0.49
USF1-203ENST00000368021 NELL2Q99435 816 aa11.96□□□□□ -0.49
USF1-203ENST00000368021 HDAC8Q9BY41 377 aa11.96□□□□□ -0.49
USF1-203ENST00000368021 FAM192AQ9GZU8 254 aa11.96□□□□□ -0.49
USF1-203ENST00000368021 MANSC1Q9H8J5 431 aa11.96□□□□□ -0.49
USF1-203ENST00000368021 TAS2R13Q9NYV9 303 aa11.96□□□□□ -0.49
USF1-203ENST00000368021 COPG2Q9UBF2 871 aa11.96□□□□□ -0.49
USF1-203ENST00000368021 MID2Q9UJV3 735 aa11.96□□□□□ -0.49
USF1-203ENST00000368021 PCDHB1Q9Y5F3 818 aa11.96□□□□□ -0.49
USF1-203ENST00000368021 PRMT5O14744 637 aaPredicted RBP11.95□□□□□ -0.5
USF1-203ENST00000368021 AREL1O15033 823 aa11.95□□□□□ -0.5
USF1-203ENST00000368021 EGFP01133 1207 aa11.95□□□□□ -0.5
USF1-203ENST00000368021 IL1BP01584 269 aa11.95□□□□□ -0.5
USF1-203ENST00000368021 PKMP14618 531 aaKnown RBP11.95□□□□□ -0.5
USF1-203ENST00000368021 ZNF7P17097 686 aaPredicted RBP11.95□□□□□ -0.5
USF1-203ENST00000368021 DRD1P21728 446 aa11.95□□□□□ -0.5
USF1-203ENST00000368021 ACRV1P26436 265 aa11.95□□□□□ -0.5
USF1-203ENST00000368021 TIAL1Q01085 375 aaKnown RBP eCLIP11.95□□□□□ -0.5
USF1-203ENST00000368021 SEMG2Q02383 582 aa11.95□□□□□ -0.5
USF1-203ENST00000368021 GRSF1Q12849 480 aaKnown RBP eCLIP11.95□□□□□ -0.5
USF1-203ENST00000368021 IFT88Q13099 833 aa11.95□□□□□ -0.5
USF1-203ENST00000368021 CHRNA6Q15825 494 aa11.95□□□□□ -0.5
USF1-203ENST00000368021 TMEM196Q5HYL7 178 aa11.95□□□□□ -0.5
USF1-203ENST00000368021 AGAP9Q5VTM2 703 aa11.95□□□□□ -0.5
USF1-203ENST00000368021 C16orf46Q6P387 395 aa11.95□□□□□ -0.5
USF1-203ENST00000368021 FBXL19Q6PCT2 694 aa11.95□□□□□ -0.5
USF1-203ENST00000368021 Q6ZS52 159 aa11.95□□□□□ -0.5
USF1-203ENST00000368021 SERPINA9Q86WD7 417 aa11.95□□□□□ -0.5
USF1-203ENST00000368021 NUDCD3Q8IVD9 361 aa11.95□□□□□ -0.5
USF1-203ENST00000368021 RBFAQ8N0V3 343 aa11.95□□□□□ -0.5
USF1-203ENST00000368021 CCDC63Q8NA47 563 aa11.95□□□□□ -0.5
USF1-203ENST00000368021 RDH11Q8TC12 318 aa11.95□□□□□ -0.5
USF1-203ENST00000368021 KCTD4Q8WVF5 259 aa11.95□□□□□ -0.5
USF1-203ENST00000368021 KCNJ9Q92806 393 aa11.95□□□□□ -0.5
USF1-203ENST00000368021 RAB7BQ96AH8 199 aa11.95□□□□□ -0.5
USF1-203ENST00000368021 ARRDC3Q96B67 414 aa11.95□□□□□ -0.5
USF1-203ENST00000368021 ULK4Q96C45 1275 aa11.95□□□□□ -0.5
USF1-203ENST00000368021 MSANTD3Q96H12 275 aa11.95□□□□□ -0.5
USF1-203ENST00000368021 GPR78Q96P69 363 aa11.95□□□□□ -0.5
USF1-203ENST00000368021 P2RY12Q9H244 342 aa11.95□□□□□ -0.5
USF1-203ENST00000368021 FAM96AQ9H5X1 160 aa11.95□□□□□ -0.5
USF1-203ENST00000368021 DYRK4Q9NR20 520 aa11.95□□□□□ -0.5
USF1-203ENST00000368021 ZNF358Q9NW07 568 aa11.95□□□□□ -0.5
USF1-203ENST00000368021 SMOXQ9NWM0 555 aa11.95□□□□□ -0.5
USF1-203ENST00000368021 CRLS1Q9UJA2 301 aa11.95□□□□□ -0.5
USF1-203ENST00000368021 ZNF318Q5VUA4 2279 aa11.95□□□□□ -0.5
USF1-203ENST00000368021 WDR91A4D1P6 747 aa11.95□□□□□ -0.5
USF1-203ENST00000368021 GOLGA8CPA6NN73 597 aa11.95□□□□□ -0.5
USF1-203ENST00000368021 OR1I1O60431 355 aa11.95□□□□□ -0.5
USF1-203ENST00000368021 PYGLP06737 847 aa11.95□□□□□ -0.5
USF1-203ENST00000368021 LTA4HP09960 611 aaKnown RBP11.95□□□□□ -0.5
USF1-203ENST00000368021 CHRNB1P11230 501 aa11.95□□□□□ -0.5
USF1-203ENST00000368021 ADRB3P13945 408 aa11.95□□□□□ -0.5
USF1-203ENST00000368021 ZNF37AP17032 561 aaPredicted RBP11.95□□□□□ -0.5
USF1-203ENST00000368021 TPP2P29144 1249 aaPredicted RBP11.95□□□□□ -0.5
USF1-203ENST00000368021 FMO4P31512 558 aa11.95□□□□□ -0.5
USF1-203ENST00000368021 GMPRP36959 345 aa11.95□□□□□ -0.5
USF1-203ENST00000368021 SKIV2L2P42285 1042 aaKnown RBP11.95□□□□□ -0.5
USF1-203ENST00000368021 SCTRP47872 440 aa11.95□□□□□ -0.5
USF1-203ENST00000368021 ITIH4Q14624 930 aa11.95□□□□□ -0.5
USF1-203ENST00000368021 PCLAFQ15004 111 aa11.95□□□□□ -0.5
USF1-203ENST00000368021 POM121L1PQ3SYA9 428 aa11.95□□□□□ -0.5
USF1-203ENST00000368021 ATG16L1Q676U5 607 aa11.95□□□□□ -0.5
USF1-203ENST00000368021 LIPIQ6XZB0 460 aa11.95□□□□□ -0.5
USF1-203ENST00000368021 ERN2Q76MJ5 926 aaKnown RBP11.95□□□□□ -0.5
USF1-203ENST00000368021 MMAAQ8IVH4 418 aaKnown RBP11.95□□□□□ -0.5
USF1-203ENST00000368021 NRSN1Q8IZ57 195 aa11.95□□□□□ -0.5
USF1-203ENST00000368021 ZNF687Q8N1G0 1237 aa11.95□□□□□ -0.5
USF1-203ENST00000368021 NXPE1Q8N323 547 aa11.95□□□□□ -0.5
USF1-203ENST00000368021 SNRNP27Q8WVK2 155 aaKnown RBP11.95□□□□□ -0.5
USF1-203ENST00000368021 GRAMD1AQ96CP6 724 aa11.95□□□□□ -0.5
USF1-203ENST00000368021 GABRG3Q99928 467 aa11.95□□□□□ -0.5
USF1-203ENST00000368021 MRPL57Q9BQC6 102 aaKnown RBP11.95□□□□□ -0.5
USF1-203ENST00000368021 PITPNM3Q9BZ71 974 aa11.95□□□□□ -0.5
USF1-203ENST00000368021 RSPH9Q9H1X1 276 aaPredicted RBP11.95□□□□□ -0.5
USF1-203ENST00000368021 FBRSQ9HAH7 460 aa11.95□□□□□ -0.5
USF1-203ENST00000368021 SYTL2Q9HCH5 934 aa11.95□□□□□ -0.5
USF1-203ENST00000368021 ZDHHC4Q9NPG8 344 aa11.95□□□□□ -0.5
USF1-203ENST00000368021 IGSF5Q9NSI5 407 aa11.95□□□□□ -0.5
USF1-203ENST00000368021 FGFR1OP2Q9NVK5 253 aa11.95□□□□□ -0.5
USF1-203ENST00000368021 DLGAP2Q9P1A6 1054 aa11.95□□□□□ -0.5
USF1-203ENST00000368021 RUVBL2Q9Y230 463 aaKnown RBP11.95□□□□□ -0.5
USF1-203ENST00000368021 MED16Q9Y2X0 877 aa11.95□□□□□ -0.5
USF1-203ENST00000368021 CACNA1IQ9P0X4 2223 aa11.95□□□□□ -0.5
USF1-203ENST00000368021 PLXNA2O75051 1894 aa11.94□□□□□ -0.5
USF1-203ENST00000368021 H3BMM5 538 aa11.94□□□□□ -0.5
USF1-203ENST00000368021 GPR39O43194 453 aa11.94□□□□□ -0.5
USF1-203ENST00000368021 SPINT1O43278 529 aa11.94□□□□□ -0.5
USF1-203ENST00000368021 RNASEH1O60930 286 aaKnown RBP11.94□□□□□ -0.5
USF1-203ENST00000368021 E2F6O75461 281 aa11.94□□□□□ -0.5
USF1-203ENST00000368021 RHOBTB1O94844 696 aa11.94□□□□□ -0.5
USF1-203ENST00000368021 ANP32DO95626 131 aa11.94□□□□□ -0.5
USF1-203ENST00000368021 ELFN1P0C7U0 828 aa11.94□□□□□ -0.5
USF1-203ENST00000368021 CPA3P15088 417 aa11.94□□□□□ -0.5
USF1-203ENST00000368021 NTSR1P30989 418 aa11.94□□□□□ -0.5
USF1-203ENST00000368021 PGGT1BP53609 377 aa11.94□□□□□ -0.5
Retrieved 100 of 20,778 RNA–protein pairs in 51.5 ms