RNA–Protein interactions for RNA: YNR046W

TRM112, Transcript of Protein involved in methylation of tRNA, rRNA, and translation factors, yeastyeast

Gene TRM112, Length 408 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
TRM112YNR046W OSH2Q12451 1283 aa5.04□□□□□ -1.6
TRM112YNR046W TY1A-PR3Q6Q5H1 440 aaKnown RBP5.04□□□□□ -1.6
TRM112YNR046W TY1A-OLQ92392 440 aaKnown RBP5.04□□□□□ -1.6
TRM112YNR046W SAC7P17121 654 aa5.03□□□□□ -1.6
TRM112YNR046W MKK2P32491 506 aa5.03□□□□□ -1.6
TRM112YNR046W PBP2P38151 413 aaKnown RBP RIP-Chip data5.03□□□□□ -1.6not detected
TRM112YNR046W YBR184WP38299 523 aa5.03□□□□□ -1.6
TRM112YNR046W PAN5P38787 379 aa5.03□□□□□ -1.6
TRM112YNR046W CHZ1P40019 153 aaPredicted RBP5.03□□□□□ -1.6
TRM112YNR046W IRR1P40541 1150 aa5.03□□□□□ -1.6
TRM112YNR046W BUD6P41697 788 aa5.03□□□□□ -1.6
TRM112YNR046W UBP3Q01477 912 aaKnown RBP RIP-Chip data5.03□□□□□ -1.6 RIP-Chip
TRM112YNR046W GIS4Q04233 774 aa5.03□□□□□ -1.6
TRM112YNR046W YLR225CQ05948 407 aaKnown RBP5.03□□□□□ -1.6
TRM112YNR046W LAP2Q10740 671 aa5.03□□□□□ -1.6
TRM112YNR046W ABD1P32783 436 aaPredicted RBP5.02□□□□□ -1.61
TRM112YNR046W SCT1P32784 759 aa5.02□□□□□ -1.61
TRM112YNR046W PIN4P34217 668 aaKnown RBP RIP-Chip data5.02□□□□□ -1.61not detected
TRM112YNR046W ALG14P38242 237 aa5.02□□□□□ -1.61
TRM112YNR046W YMR074CQ04773 145 aa5.02□□□□□ -1.61
TRM112YNR046W RKM4Q12504 494 aa5.02□□□□□ -1.61
TRM112YNR046W TY4B-PA0A0B7P3V8 1104 aa5.01□□□□□ -1.61
TRM112YNR046W INO1P11986 533 aa5.01□□□□□ -1.61
TRM112YNR046W NAR1P23503 491 aaKnown RBP5.01□□□□□ -1.61
TRM112YNR046W GAR1P28007 205 aaKnown RBP5.01□□□□□ -1.61
TRM112YNR046W VBA5P36172 582 aa5.01□□□□□ -1.61
TRM112YNR046W PBY1P38254 753 aa5.01□□□□□ -1.61
TRM112YNR046W HSE1P38753 452 aa5.01□□□□□ -1.61
TRM112YNR046W GGA2P38817 585 aaKnown RBP5.01□□□□□ -1.61
TRM112YNR046W FPR3P38911 411 aaKnown RBP5.01□□□□□ -1.61
TRM112YNR046W POL5P39985 1022 aaKnown RBP5.01□□□□□ -1.61
TRM112YNR046W TED1P40533 473 aa5.01□□□□□ -1.61
TRM112YNR046W CNN1P43618 361 aa5.01□□□□□ -1.61
TRM112YNR046W YGR125WP53273 1036 aa5.01□□□□□ -1.61
TRM112YNR046W ALG12P53730 551 aa5.01□□□□□ -1.61
TRM112YNR046W AVO1Q08236 1176 aa5.01□□□□□ -1.61
TRM112YNR046W FLC1Q08967 793 aa5.01□□□□□ -1.61
TRM112YNR046W ELG1Q12050 791 aa5.01□□□□□ -1.61
TRM112YNR046W TY4A-HQ6Q5P6 413 aa5.01□□□□□ -1.61
TRM112YNR046W HSP60P19882 572 aaKnown RBP5□□□□□ -1.61
TRM112YNR046W DBP5P20449 482 aaKnown RBP5□□□□□ -1.61
TRM112YNR046W GBP2P25555 427 aaKnown RBP RIP-Chip data5□□□□□ -1.61not detected
TRM112YNR046W MAE1P36013 669 aaKnown RBP5□□□□□ -1.61
TRM112YNR046W PGM2P37012 569 aaKnown RBP5□□□□□ -1.61
TRM112YNR046W YAR028WP39548 234 aa5□□□□□ -1.61
TRM112YNR046W YNR063WP53749 607 aa5□□□□□ -1.61
TRM112YNR046W DSE4P53753 1117 aa5□□□□□ -1.61
TRM112YNR046W TIF35Q04067 274 aaKnown RBP5□□□□□ -1.61
TRM112YNR046W DPH6Q12429 685 aa5□□□□□ -1.61
TRM112YNR046W NHA1Q99271 985 aa5□□□□□ -1.61
TRM112YNR046W MET6P05694 767 aaKnown RBP4.99□□□□□ -1.61
TRM112YNR046W GAL11P19659 1081 aa4.99□□□□□ -1.61
TRM112YNR046W RPL8BP29453 256 aaKnown RBP4.99□□□□□ -1.61
TRM112YNR046W YKL107WP34251 309 aa4.99□□□□□ -1.61
TRM112YNR046W MOT2P34909 587 aaKnown RBP4.99□□□□□ -1.61
TRM112YNR046W MCM7P38132 845 aa4.99□□□□□ -1.61
TRM112YNR046W SEA4P38164 1038 aa4.99□□□□□ -1.61
TRM112YNR046W RSP5P39940 809 aaKnown RBP4.99□□□□□ -1.61
TRM112YNR046W NUP82P40368 713 aa4.99□□□□□ -1.61
TRM112YNR046W VPS53P47061 822 aa4.99□□□□□ -1.61
TRM112YNR046W HNT2P49775 206 aa4.99□□□□□ -1.61
TRM112YNR046W ERP6P53198 216 aa4.99□□□□□ -1.61
TRM112YNR046W RAT1Q02792 1006 aaKnown RBP4.99□□□□□ -1.61
TRM112YNR046W EAF1Q06337 982 aa4.99□□□□□ -1.61
TRM112YNR046W FMP25Q08023 583 aa4.99□□□□□ -1.61
TRM112YNR046W PTC5Q12511 572 aa4.99□□□□□ -1.61
TRM112YNR046W CIT1P00890 479 aa4.98□□□□□ -1.61
TRM112YNR046W SBP1P10080 294 aaKnown RBP4.98□□□□□ -1.61
TRM112YNR046W PRP9P19736 530 aaKnown RBP4.98□□□□□ -1.61
TRM112YNR046W STE5P32917 917 aa4.98□□□□□ -1.61
TRM112YNR046W RGD1P38339 666 aa4.98□□□□□ -1.61
TRM112YNR046W YHR020WP38708 688 aaKnown RBP4.98□□□□□ -1.61
TRM112YNR046W HUL4P40985 892 aa4.98□□□□□ -1.61
TRM112YNR046W YGL176CP46945 554 aa4.98□□□□□ -1.61
TRM112YNR046W JJJ3P47138 172 aa4.98□□□□□ -1.61
TRM112YNR046W YLR125WQ12138 136 aa4.98□□□□□ -1.61
TRM112YNR046W PHO8P11491 566 aa4.97□□□□□ -1.61
TRM112YNR046W ARE1P25628 610 aa4.97□□□□□ -1.61
TRM112YNR046W ALG3P38179 458 aa4.97□□□□□ -1.61
TRM112YNR046W SPO74P45819 413 aa4.97□□□□□ -1.61
TRM112YNR046W YGR045CP53229 120 aa4.97□□□□□ -1.61
TRM112YNR046W UTP8P53276 713 aaKnown RBP4.97□□□□□ -1.61
TRM112YNR046W ESC2Q06340 456 aa4.97□□□□□ -1.61
TRM112YNR046W AOS1Q06624 347 aa4.97□□□□□ -1.61
TRM112YNR046W PPM2Q08282 695 aa4.97□□□□□ -1.61
TRM112YNR046W ALG6Q12001 544 aaKnown RBP4.97□□□□□ -1.61
TRM112YNR046W PUF4P25339 888 aaKnown RBP RIP-Chip data4.96□□□□□ -1.62not detected
TRM112YNR046W MLS1P30952 554 aa4.96□□□□□ -1.62
TRM112YNR046W AFG2P32794 780 aa4.96□□□□□ -1.62
TRM112YNR046W MPH1P40562 993 aa4.96□□□□□ -1.62
TRM112YNR046W UTP14Q04500 899 aaKnown RBP4.96□□□□□ -1.62
TRM112YNR046W POB3Q04636 552 aaKnown RBP4.96□□□□□ -1.62
TRM112YNR046W YOR223WQ12015 292 aa4.96□□□□□ -1.62
TRM112YNR046W GNT1Q12096 491 aa4.96□□□□□ -1.62
TRM112YNR046W ERS1P17261 260 aa4.95□□□□□ -1.62
TRM112YNR046W NFS1P25374 497 aa4.95□□□□□ -1.62
TRM112YNR046W TPO2P53283 614 aa4.95□□□□□ -1.62
TRM112YNR046W ELA1P53861 379 aaPredicted RBP4.95□□□□□ -1.62
TRM112YNR046W YPL260WQ08977 551 aa4.95□□□□□ -1.62
TRM112YNR046W CAN1P04817 590 aa4.94□□□□□ -1.62
Retrieved 100 of 5,963 RNA–protein pairs in 9.5 ms