RNA–Protein interactions for RNA: YLR133W

CKI1, Transcript of Choline kinase, yeastyeast

Gene CKI1, Length 1,749 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
CKI1YLR133W ATG1P53104 897 aa8.46□□□□□ -1.05
CKI1YLR133W CPA2P03965 1118 aaKnown RBP8.46□□□□□ -1.06
CKI1YLR133W SAM2P19358 384 aaKnown RBP8.46□□□□□ -1.06
CKI1YLR133W RIT1P23796 513 aa8.46□□□□□ -1.06
CKI1YLR133W FRS2P15625 503 aaKnown RBP8.45□□□□□ -1.06
CKI1YLR133W MBR1P23493 339 aa8.45□□□□□ -1.06
CKI1YLR133W RER2P35196 286 aa8.45□□□□□ -1.06
CKI1YLR133W CCT5P40413 562 aaKnown RBP8.45□□□□□ -1.06
CKI1YLR133W VMA2P16140 517 aaKnown RBP8.44□□□□□ -1.06
CKI1YLR133W PKC1P24583 1151 aa8.44□□□□□ -1.06
CKI1YLR133W TTI1P36097 1038 aa8.44□□□□□ -1.06
CKI1YLR133W UBP9P39967 754 aa8.44□□□□□ -1.06
CKI1YLR133W FOL1P53848 824 aa8.44□□□□□ -1.06
CKI1YLR133W HDA1P53973 706 aa8.44□□□□□ -1.06
CKI1YLR133W SSL2Q00578 843 aa8.44□□□□□ -1.06
CKI1YLR133W IMP2'P32351 346 aa8.43□□□□□ -1.06
CKI1YLR133W EUG1P32474 517 aa8.43□□□□□ -1.06
CKI1YLR133W GPB2P39717 880 aa8.43□□□□□ -1.06
CKI1YLR133W PSF2P40359 213 aa8.43□□□□□ -1.06
CKI1YLR133W HOS4P40480 1083 aa8.43□□□□□ -1.06
CKI1YLR133W PTK2P47116 818 aaKnown RBP8.43□□□□□ -1.06
CKI1YLR133W VPS30Q02948 557 aa8.43□□□□□ -1.06
CKI1YLR133W ESF1Q06344 628 aaKnown RBP8.43□□□□□ -1.06
CKI1YLR133W TRS33Q99394 268 aa8.43□□□□□ -1.06
CKI1YLR133W RAD18P10862 487 aa8.43□□□□□ -1.06
CKI1YLR133W RDS1P25611 832 aa8.43□□□□□ -1.06
CKI1YLR133W NNF2P53253 936 aa8.43□□□□□ -1.06
CKI1YLR133W YAF9P53930 226 aa8.43□□□□□ -1.06
CKI1YLR133W RPT6Q01939 405 aaKnown RBP8.43□□□□□ -1.06
CKI1YLR133W PIB1Q06651 286 aa8.43□□□□□ -1.06
CKI1YLR133W ELG1Q12050 791 aa8.43□□□□□ -1.06
CKI1YLR133W NUC1P08466 329 aa8.42□□□□□ -1.06
CKI1YLR133W MAK31P23059 88 aa8.42□□□□□ -1.06
CKI1YLR133W RPL8BP29453 256 aaKnown RBP8.42□□□□□ -1.06
CKI1YLR133W NPR3P38742 1146 aa8.42□□□□□ -1.06
CKI1YLR133W RPT2P40327 437 aaKnown RBP8.42□□□□□ -1.06
CKI1YLR133W ATG36P46983 293 aa8.42□□□□□ -1.06
CKI1YLR133W ALD6P54115 500 aaKnown RBP8.42□□□□□ -1.06
CKI1YLR133W MYO5Q04439 1219 aaKnown RBP8.42□□□□□ -1.06
CKI1YLR133W PEP3P27801 918 aa8.41□□□□□ -1.06
CKI1YLR133W YKE2P52553 114 aa8.41□□□□□ -1.06
CKI1YLR133W ULP1Q02724 621 aa8.41□□□□□ -1.06
CKI1YLR133W CLF1Q12309 687 aaPredicted RBP8.41□□□□□ -1.06
CKI1YLR133W YKR018CP36114 725 aa8.4□□□□□ -1.06
CKI1YLR133W MRPL10P36520 322 aa8.4□□□□□ -1.06
CKI1YLR133W PAM1P37304 830 aaKnown RBP8.4□□□□□ -1.06
CKI1YLR133W VPS45P38932 577 aa8.4□□□□□ -1.06
CKI1YLR133W MXR1P40029 184 aa8.4□□□□□ -1.06
CKI1YLR133W VMS1Q04311 632 aaKnown RBP8.4□□□□□ -1.06
CKI1YLR133W TFC6Q06339 672 aa8.4□□□□□ -1.06
CKI1YLR133W PSK2Q08217 1101 aa8.4□□□□□ -1.06
CKI1YLR133W CDC19P00549 500 aaKnown RBP8.4□□□□□ -1.07
CKI1YLR133W PAH1P32567 862 aa8.4□□□□□ -1.07
CKI1YLR133W FBP26P32604 452 aa8.4□□□□□ -1.07
CKI1YLR133W ELM1P32801 640 aa8.4□□□□□ -1.07
CKI1YLR133W PHO88P38264 188 aaPredicted RBP8.4□□□□□ -1.07
CKI1YLR133W YHL017WP38745 532 aa8.4□□□□□ -1.07
CKI1YLR133W EPL1P43572 832 aa8.4□□□□□ -1.07
CKI1YLR133W EST2Q06163 884 aa8.4□□□□□ -1.07
CKI1YLR133W YPL150WQ12152 901 aa8.4□□□□□ -1.07
CKI1YLR133W SES1P07284 462 aaKnown RBP8.39□□□□□ -1.07
CKI1YLR133W UTR4P32626 227 aa8.39□□□□□ -1.07
CKI1YLR133W ISW1P38144 1129 aa8.39□□□□□ -1.07
CKI1YLR133W RFC5P38251 354 aa8.39□□□□□ -1.07
CKI1YLR133W CSM2P40465 213 aa8.39□□□□□ -1.07
CKI1YLR133W BUD6P41697 788 aa8.39□□□□□ -1.07
CKI1YLR133W ALG2P43636 503 aa8.39□□□□□ -1.07
CKI1YLR133W ETT1Q08421 412 aaKnown RBP8.39□□□□□ -1.07
CKI1YLR133W MATALPHA2P0CY08 210 aa8.38□□□□□ -1.07
CKI1YLR133W HMLALPHA2P0CY09 210 aa8.38□□□□□ -1.07
CKI1YLR133W TGL1P34163 548 aa8.38□□□□□ -1.07
CKI1YLR133W MAC1P35192 417 aa8.38□□□□□ -1.07
CKI1YLR133W MAL33P38157 468 aa8.38□□□□□ -1.07
CKI1YLR133W UTP4Q06679 776 aaKnown RBP8.38□□□□□ -1.07
CKI1YLR133W ISW2Q08773 1120 aa8.38□□□□□ -1.07
CKI1YLR133W APL5Q08951 932 aaKnown RBP8.38□□□□□ -1.07
CKI1YLR133W SAM1P10659 382 aaKnown RBP8.37□□□□□ -1.07
CKI1YLR133W ATE1P16639 503 aa8.37□□□□□ -1.07
CKI1YLR133W SRP54P20424 541 aaKnown RBP8.37□□□□□ -1.07
CKI1YLR133W PRE10P21242 288 aaKnown RBP RIP-Chip data8.37□□□□□ -1.07not detected
CKI1YLR133W YGR125WP53273 1036 aa8.37□□□□□ -1.07
CKI1YLR133W TMA64Q04600 565 aaKnown RBP8.37□□□□□ -1.07
CKI1YLR133W DUS4Q06063 367 aa8.37□□□□□ -1.07
CKI1YLR133W ESC2Q06340 456 aa8.37□□□□□ -1.07
CKI1YLR133W CSC1Q06538 782 aa8.37□□□□□ -1.07
CKI1YLR133W ICL2Q12031 575 aa8.37□□□□□ -1.07
CKI1YLR133W SRP40P32583 406 aaPredicted RBP8.37□□□□□ -1.07
CKI1YLR133W MFT1P33441 392 aaKnown RBP8.37□□□□□ -1.07
CKI1YLR133W TOM71P38825 639 aaKnown RBP8.37□□□□□ -1.07
CKI1YLR133W TAN1P53072 289 aaPredicted RBP8.37□□□□□ -1.07
CKI1YLR133W LSB1P53281 241 aa8.37□□□□□ -1.07
CKI1YLR133W MDM1Q01846 1127 aa8.37□□□□□ -1.07
CKI1YLR133W SPH1Q06160 661 aa8.37□□□□□ -1.07
CKI1YLR133W SUE1Q06524 206 aa8.37□□□□□ -1.07
CKI1YLR133W MET7Q08645 548 aa8.37□□□□□ -1.07
CKI1YLR133W ARP8Q12386 881 aaKnown RBP RIP-Chip data8.37□□□□□ -1.07not detected
CKI1YLR133W GPA1P08539 472 aa8.36□□□□□ -1.07
CKI1YLR133W CYC8P14922 966 aa8.36□□□□□ -1.07
CKI1YLR133W YER130CP39959 443 aa8.36□□□□□ -1.07
CKI1YLR133W BUL2Q03758 920 aaKnown RBP8.36□□□□□ -1.07
Retrieved 100 of 5,963 RNA–protein pairs in 22.9 ms