RNA–Protein interactions for RNA: YKL006C-A

SFT1, Transcript of Intra-Golgi v-SNARE, yeastyeast

Gene SFT1, Length 294 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
SFT1YKL006C-A RET1P22276 1149 aaKnown RBP5.38□□□□□ -1.55
SFT1YKL006C-A RPS26AP39938 119 aaKnown RBP5.38□□□□□ -1.55
SFT1YKL006C-A RPS26BP39939 119 aaKnown RBP5.38□□□□□ -1.55
SFT1YKL006C-A CTH1P47976 325 aa5.38□□□□□ -1.55
SFT1YKL006C-A YGL140CP53120 1219 aa5.38□□□□□ -1.55
SFT1YKL006C-A YGR122WP53272 402 aa5.38□□□□□ -1.55
SFT1YKL006C-A MAG2Q06436 670 aaKnown RBP5.38□□□□□ -1.55
SFT1YKL006C-A SCP160P06105 1222 aaKnown RBP RIP-Chip data5.37□□□□□ -1.55not detected
SFT1YKL006C-A ADD66P36040 267 aa5.37□□□□□ -1.55
SFT1YKL006C-A NMD3P38861 518 aaKnown RBP5.37□□□□□ -1.55
SFT1YKL006C-A TPP1Q03796 238 aa5.37□□□□□ -1.55
SFT1YKL006C-A YLR257WQ06146 321 aaKnown RBP5.37□□□□□ -1.55
SFT1YKL006C-A MCD1Q12158 566 aa5.37□□□□□ -1.55
SFT1YKL006C-A RAD2P07276 1031 aa5.36□□□□□ -1.55
SFT1YKL006C-A MCM2P29469 868 aa5.36□□□□□ -1.55
SFT1YKL006C-A PEP7P32609 515 aa5.36□□□□□ -1.55
SFT1YKL006C-A EST2Q06163 884 aa5.36□□□□□ -1.55
SFT1YKL006C-A TRE1Q08919 783 aa5.36□□□□□ -1.55
SFT1YKL006C-A YVC1Q12324 675 aa5.36□□□□□ -1.55
SFT1YKL006C-A DED1P06634 604 aaKnown RBP5.35□□□□□ -1.55
SFT1YKL006C-A ADP1P25371 1049 aa5.35□□□□□ -1.55
SFT1YKL006C-A PIC2P40035 300 aa5.35□□□□□ -1.55
SFT1YKL006C-A OYE3P41816 400 aaPredicted RBP5.35□□□□□ -1.55
SFT1YKL006C-A PUS7Q08647 676 aaKnown RBP5.35□□□□□ -1.55
SFT1YKL006C-A CYC8P14922 966 aa5.34□□□□□ -1.55
SFT1YKL006C-A ASF1P32447 279 aa5.34□□□□□ -1.55
SFT1YKL006C-A RSA3Q05942 220 aaKnown RBP5.34□□□□□ -1.55
SFT1YKL006C-A PRO1P32264 428 aa5.33□□□□□ -1.56
SFT1YKL006C-A SEC8P32855 1065 aa5.33□□□□□ -1.56
SFT1YKL006C-A RDH54P38086 958 aa5.33□□□□□ -1.56
SFT1YKL006C-A AVT1P47082 602 aa5.33□□□□□ -1.56
SFT1YKL006C-A SSY1Q03770 852 aa5.33□□□□□ -1.56
SFT1YKL006C-A RKM2Q03942 479 aa5.33□□□□□ -1.56
SFT1YKL006C-A SPR28Q04921 423 aa5.33□□□□□ -1.56
SFT1YKL006C-A HEM13P11353 328 aaKnown RBP5.32□□□□□ -1.56
SFT1YKL006C-A SEC23P15303 768 aaKnown RBP5.32□□□□□ -1.56
SFT1YKL006C-A QNS1P38795 714 aaKnown RBP5.32□□□□□ -1.56
SFT1YKL006C-A VPS53P47061 822 aa5.32□□□□□ -1.56
SFT1YKL006C-A YJR107WP47145 328 aa5.32□□□□□ -1.56
SFT1YKL006C-A HRK1Q08732 759 aaKnown RBP5.32□□□□□ -1.56
SFT1YKL006C-A POL12P38121 705 aaPredicted RBP5.31□□□□□ -1.56
SFT1YKL006C-A PTC7P38797 343 aa5.31□□□□□ -1.56
SFT1YKL006C-A OYE2Q03558 400 aaKnown RBP5.31□□□□□ -1.56
SFT1YKL006C-A HSP78P33416 811 aa5.3□□□□□ -1.56
SFT1YKL006C-A SEA4P38164 1038 aa5.3□□□□□ -1.56
SFT1YKL006C-A PEX7P39108 375 aa5.3□□□□□ -1.56
SFT1YKL006C-A FYV10P40492 516 aa5.3□□□□□ -1.56
SFT1YKL006C-A GTS1P40956 396 aa5.3□□□□□ -1.56
SFT1YKL006C-A MRL1Q06815 381 aa5.3□□□□□ -1.56
SFT1YKL006C-A PTC5Q12511 572 aa5.3□□□□□ -1.56
SFT1YKL006C-A TAF13P11747 167 aa5.29□□□□□ -1.56
SFT1YKL006C-A YHL012WP38709 493 aa5.29□□□□□ -1.56
SFT1YKL006C-A RRP15Q06511 250 aaPredicted RBP5.29□□□□□ -1.56
SFT1YKL006C-A HDA2Q06629 674 aa5.29□□□□□ -1.56
SFT1YKL006C-A YJL045WP47052 634 aa5.28□□□□□ -1.56
SFT1YKL006C-A ROD1Q02805 837 aa5.28□□□□□ -1.56
SFT1YKL006C-A ESF1Q06344 628 aaKnown RBP5.28□□□□□ -1.56
SFT1YKL006C-A DFG16Q99234 619 aa5.28□□□□□ -1.56
SFT1YKL006C-A GCR1P07261 785 aa5.27□□□□□ -1.57
SFT1YKL006C-A RAD27P26793 382 aa5.27□□□□□ -1.57
SFT1YKL006C-A LRG1P35688 1017 aa5.27□□□□□ -1.57
SFT1YKL006C-A FOL2P51601 243 aaKnown RBP5.27□□□□□ -1.57
SFT1YKL006C-A UBP3Q01477 912 aaKnown RBP RIP-Chip data5.27□□□□□ -1.57not detected
SFT1YKL006C-A KIP1P28742 1111 aa5.26□□□□□ -1.57
SFT1YKL006C-A AFG2P32794 780 aa5.26□□□□□ -1.57
SFT1YKL006C-A MDL2P33311 773 aa5.26□□□□□ -1.57
SFT1YKL006C-A ALG3P38179 458 aa5.26□□□□□ -1.57
SFT1YKL006C-A IRC24P40580 263 aa5.26□□□□□ -1.57
SFT1YKL006C-A ECL1P48235 211 aa5.26□□□□□ -1.57
SFT1YKL006C-A YSC84P32793 468 aa5.25□□□□□ -1.57
SFT1YKL006C-A AIM26P32858 118 aa5.25□□□□□ -1.57
SFT1YKL006C-A SEG2P34250 1132 aa5.25□□□□□ -1.57
SFT1YKL006C-A GPB2P39717 880 aa5.25□□□□□ -1.57
SFT1YKL006C-A SIW14P53965 281 aa5.25□□□□□ -1.57
SFT1YKL006C-A SAM35P14693 329 aa5.24□□□□□ -1.57
SFT1YKL006C-A MKK2P32491 506 aa5.24□□□□□ -1.57
SFT1YKL006C-A RAT1Q02792 1006 aaKnown RBP5.24□□□□□ -1.57
SFT1YKL006C-A RMD1Q03441 430 aa5.24□□□□□ -1.57
SFT1YKL006C-A NBA1Q08229 501 aaKnown RBP5.24□□□□□ -1.57
SFT1YKL006C-A COQ4O13525 335 aa5.23□□□□□ -1.57
SFT1YKL006C-A SRO9P25567 434 aaKnown RBP5.23□□□□□ -1.57
SFT1YKL006C-A HOS3Q02959 697 aaKnown RBP5.23□□□□□ -1.57
SFT1YKL006C-A RTT10Q08924 1013 aa5.23□□□□□ -1.57
SFT1YKL006C-A LPX1Q12405 387 aaKnown RBP5.23□□□□□ -1.57
SFT1YKL006C-A SPO21Q12411 609 aa5.23□□□□□ -1.57
SFT1YKL006C-A SYP1P25623 870 aaKnown RBP5.22□□□□□ -1.57
SFT1YKL006C-A PET112P33893 541 aa5.22□□□□□ -1.57
SFT1YKL006C-A ENT3P47160 408 aa5.22□□□□□ -1.57
SFT1YKL006C-A TNA1P53322 534 aa5.22□□□□□ -1.57
SFT1YKL006C-A ORC3P54790 616 aa5.22□□□□□ -1.57
SFT1YKL006C-A RSB1Q08417 382 aa5.22□□□□□ -1.57
SFT1YKL006C-A YPL260WQ08977 551 aa5.22□□□□□ -1.57
SFT1YKL006C-A GAS1P22146 559 aaKnown RBP5.21□□□□□ -1.58
SFT1YKL006C-A PUF4P25339 888 aaKnown RBP RIP-Chip data5.21□□□□□ -1.58not detected
SFT1YKL006C-A RNQ1P25367 405 aa5.21□□□□□ -1.58
SFT1YKL006C-A CCZ1P38273 704 aa5.21□□□□□ -1.58
SFT1YKL006C-A RSC58Q07979 502 aa5.21□□□□□ -1.58
SFT1YKL006C-A SPS1P08458 490 aa5.2□□□□□ -1.58
SFT1YKL006C-A MLS1P30952 554 aa5.2□□□□□ -1.58
SFT1YKL006C-A HXT13P39924 564 aa5.2□□□□□ -1.58
Retrieved 100 of 5,963 RNA–protein pairs in 16.2 ms