RNA–Protein interactions for RNA: YIL084C

SDS3, Transcript of Component of the Rpd3L histone deacetylase complex, yeastyeast

Gene SDS3, Length 984 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
SDS3YIL084C MSH6Q03834 1242 aa6.12□□□□□ -1.43
SDS3YIL084C INP51P40559 946 aaKnown RBP6.11□□□□□ -1.43
SDS3YIL084C SPO74P45819 413 aa6.11□□□□□ -1.43
SDS3YIL084C DSE4P53753 1117 aa6.11□□□□□ -1.43
SDS3YIL084C PMT7Q06644 662 aa6.11□□□□□ -1.43
SDS3YIL084C COBP00163 385 aa6.1□□□□□ -1.43
SDS3YIL084C PRP40P33203 583 aaKnown RBP6.1□□□□□ -1.43
SDS3YIL084C RVS167P39743 482 aaKnown RBP6.1□□□□□ -1.43
SDS3YIL084C NUT1P53114 1132 aa6.1□□□□□ -1.43
SDS3YIL084C YGR122WP53272 402 aa6.1□□□□□ -1.43
SDS3YIL084C ALD3P54114 506 aa6.1□□□□□ -1.43
SDS3YIL084C DAL4Q04895 635 aa6.1□□□□□ -1.43
SDS3YIL084C SVF1Q05515 481 aa6.1□□□□□ -1.43
SDS3YIL084C VTH1P40438 1549 aa6.09□□□□□ -1.43
SDS3YIL084C VTH2P40890 1549 aa6.09□□□□□ -1.43
SDS3YIL084C NAP1P25293 417 aaKnown RBP6.09□□□□□ -1.43
SDS3YIL084C PAN5P38787 379 aa6.09□□□□□ -1.43
SDS3YIL084C SPO14P36126 1683 aa6.09□□□□□ -1.43
SDS3YIL084C MCM2P29469 868 aa6.08□□□□□ -1.44
SDS3YIL084C UBP5P39944 805 aa6.08□□□□□ -1.44
SDS3YIL084C FYV10P40492 516 aa6.08□□□□□ -1.44
SDS3YIL084C MON1P53129 644 aa6.08□□□□□ -1.44
SDS3YIL084C BIO5P53744 561 aaKnown RBP6.08□□□□□ -1.44
SDS3YIL084C RMD1Q03441 430 aa6.08□□□□□ -1.44
SDS3YIL084C ULS1Q08562 1619 aa6.07□□□□□ -1.44
SDS3YIL084C RPS26AP39938 119 aaKnown RBP6.07□□□□□ -1.44
SDS3YIL084C RPS26BP39939 119 aaKnown RBP6.07□□□□□ -1.44
SDS3YIL084C SDH1Q00711 640 aa6.07□□□□□ -1.44
SDS3YIL084C ESF1Q06344 628 aaKnown RBP6.07□□□□□ -1.44
SDS3YIL084C SOG2Q08817 791 aa6.07□□□□□ -1.44
SDS3YIL084C GLO4Q12320 285 aa6.07□□□□□ -1.44
SDS3YIL084C STU1P38198 1513 aa6.07□□□□□ -1.44
SDS3YIL084C HXK1P04806 485 aaKnown RBP6.06□□□□□ -1.44
SDS3YIL084C NPR1P22211 790 aa6.06□□□□□ -1.44
SDS3YIL084C MCM5P29496 775 aaKnown RBP6.06□□□□□ -1.44
SDS3YIL084C PEP7P32609 515 aa6.06□□□□□ -1.44
SDS3YIL084C LRG1P35688 1017 aa6.06□□□□□ -1.44
SDS3YIL084C TFA2P36145 328 aa6.06□□□□□ -1.44
SDS3YIL084C PAM1P37304 830 aaKnown RBP6.06□□□□□ -1.44
SDS3YIL084C RIM11P38615 370 aa6.06□□□□□ -1.44
SDS3YIL084C FAA3P39002 694 aa6.06□□□□□ -1.44
SDS3YIL084C MET10P39692 1035 aa6.06□□□□□ -1.44
SDS3YIL084C LEM3P42838 414 aa6.06□□□□□ -1.44
SDS3YIL084C MRPS18P42847 217 aa6.06□□□□□ -1.44
SDS3YIL084C SAP155P43612 1002 aa6.06□□□□□ -1.44
SDS3YIL084C GUP1P53154 560 aa6.06□□□□□ -1.44
SDS3YIL084C SPR28Q04921 423 aa6.06□□□□□ -1.44
SDS3YIL084C MCD1Q12158 566 aa6.06□□□□□ -1.44
SDS3YIL084C POL1P13382 1468 aa6.06□□□□□ -1.44
SDS3YIL084C TSC11P40061 1430 aa6.06□□□□□ -1.44
SDS3YIL084C YOR1P53049 1477 aa6.05□□□□□ -1.44
SDS3YIL084C CYC8P14922 966 aa6.05□□□□□ -1.44
SDS3YIL084C DUR3P33413 735 aa6.05□□□□□ -1.44
SDS3YIL084C SEG2P34250 1132 aa6.05□□□□□ -1.44
SDS3YIL084C SHU2P38957 223 aa6.05□□□□□ -1.44
SDS3YIL084C FET4P40988 552 aa6.05□□□□□ -1.44
SDS3YIL084C YJR124CP47159 448 aa6.05□□□□□ -1.44
SDS3YIL084C YAF9P53930 226 aa6.05□□□□□ -1.44
SDS3YIL084C CMR1Q12510 522 aaKnown RBP6.05□□□□□ -1.44
SDS3YIL084C RAD2P07276 1031 aa6.04□□□□□ -1.44
SDS3YIL084C SQT1P35184 431 aa6.04□□□□□ -1.44
SDS3YIL084C RSM26P47141 266 aa6.04□□□□□ -1.44
SDS3YIL084C NCE103P53615 221 aa6.04□□□□□ -1.44
SDS3YIL084C YNR065CP53751 1116 aa6.04□□□□□ -1.44
SDS3YIL084C ULP1Q02724 621 aa6.04□□□□□ -1.44
SDS3YIL084C TOS4Q06266 489 aa6.04□□□□□ -1.44
SDS3YIL084C SMC4Q12267 1418 aa6.04□□□□□ -1.44
SDS3YIL084C HVG1P0CE11 249 aa6.03□□□□□ -1.44
SDS3YIL084C PRP5P21372 849 aaPredicted RBP6.03□□□□□ -1.44
SDS3YIL084C POL5P39985 1022 aaKnown RBP6.03□□□□□ -1.44
SDS3YIL084C NEO1P40527 1151 aa6.03□□□□□ -1.44
SDS3YIL084C ADI1Q03677 179 aa6.03□□□□□ -1.44
SDS3YIL084C PRE9P23638 258 aaKnown RBP6.02□□□□□ -1.45
SDS3YIL084C YPL109CQ02981 657 aa6.02□□□□□ -1.45
SDS3YIL084C GCD1P09032 578 aaPredicted RBP6.01□□□□□ -1.45
SDS3YIL084C MSB1P21339 1137 aaKnown RBP6.01□□□□□ -1.45
SDS3YIL084C UGA4P32837 571 aa6.01□□□□□ -1.45
SDS3YIL084C JIP5Q06214 492 aaPredicted RBP6.01□□□□□ -1.45
SDS3YIL084C HTS1P07263 546 aaKnown RBP6□□□□□ -1.45
SDS3YIL084C YKL077WP36081 392 aa6□□□□□ -1.45
SDS3YIL084C HAS1Q03532 505 aaKnown RBP6□□□□□ -1.45
SDS3YIL084C SPO71Q03868 1245 aa6□□□□□ -1.45
SDS3YIL084C ERS1P17261 260 aa5.99□□□□□ -1.45
SDS3YIL084C PET112P33893 541 aa5.99□□□□□ -1.45
SDS3YIL084C PEX13P80667 386 aa5.99□□□□□ -1.45
SDS3YIL084C NOG1Q02892 647 aaKnown RBP5.99□□□□□ -1.45
SDS3YIL084C CLN2P20438 545 aa5.98□□□□□ -1.45
SDS3YIL084C MAE1P36013 669 aaKnown RBP5.98□□□□□ -1.45
SDS3YIL084C MAD1P40957 749 aa5.98□□□□□ -1.45
SDS3YIL084C SNQ2P32568 1501 aaKnown RBP5.98□□□□□ -1.45
SDS3YIL084C MYO4P32492 1471 aa5.97□□□□□ -1.45
SDS3YIL084C MNR2P35724 969 aa5.97□□□□□ -1.45
SDS3YIL084C PEX28P38848 579 aa5.97□□□□□ -1.45
SDS3YIL084C UTP22P53254 1237 aaPredicted RBP5.97□□□□□ -1.45
SDS3YIL084C YIG1Q08956 461 aa5.97□□□□□ -1.45
SDS3YIL084C MSH3P25336 1018 aa5.96□□□□□ -1.46
SDS3YIL084C POL12P38121 705 aaPredicted RBP5.96□□□□□ -1.46
SDS3YIL084C KIP3P53086 805 aaKnown RBP5.96□□□□□ -1.46
SDS3YIL084C FAR11P53917 953 aa5.96□□□□□ -1.46
SDS3YIL084C ELG1Q12050 791 aa5.96□□□□□ -1.46
Retrieved 100 of 5,963 RNA–protein pairs in 43 ms