RNA–Protein interactions for RNA: YGR247W

CPD1, Transcript of Cyclic nucleotide phosphodiesterase, yeastyeast

Gene CPD1, Length 720 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
CPD1YGR247W UBR2Q07963 1872 aa10.57□□□□□ -0.72
CPD1YGR247W STM1P39015 273 aaKnown RBP10.57□□□□□ -0.72
CPD1YGR247W TY1B-AO13527 1196 aaKnown RBP10.56□□□□□ -0.72
CPD1YGR247W RPL8BP29453 256 aaKnown RBP10.56□□□□□ -0.72
CPD1YGR247W ANP1P32629 500 aa10.56□□□□□ -0.72
CPD1YGR247W CLF1Q12309 687 aaPredicted RBP10.56□□□□□ -0.72
CPD1YGR247W CDC16P09798 840 aa10.55□□□□□ -0.72
CPD1YGR247W SGM1P47166 707 aa10.55□□□□□ -0.72
CPD1YGR247W LSB1P53281 241 aa10.55□□□□□ -0.72
CPD1YGR247W YNR014WP53719 212 aa10.55□□□□□ -0.72
CPD1YGR247W RPT6Q01939 405 aaKnown RBP10.55□□□□□ -0.72
CPD1YGR247W ESF1Q06344 628 aaKnown RBP10.55□□□□□ -0.72
CPD1YGR247W SSF2Q12153 453 aaPredicted RBP10.55□□□□□ -0.72
CPD1YGR247W RKM4Q12504 494 aa10.55□□□□□ -0.72
CPD1YGR247W DUR3P33413 735 aa10.54□□□□□ -0.72
CPD1YGR247W FLR1P38124 548 aa10.54□□□□□ -0.72
CPD1YGR247W POA1P38218 177 aa10.54□□□□□ -0.72
CPD1YGR247W BRL1P38770 471 aa10.54□□□□□ -0.72
CPD1YGR247W SUE1Q06524 206 aa10.54□□□□□ -0.72
CPD1YGR247W MAS2P11914 482 aa10.53□□□□□ -0.72
CPD1YGR247W RFC1P38630 861 aaKnown RBP10.53□□□□□ -0.72
CPD1YGR247W AZR1P50080 613 aa10.53□□□□□ -0.72
CPD1YGR247W LIF1P53150 421 aa10.53□□□□□ -0.72
CPD1YGR247W YNL115CP53925 644 aa10.53□□□□□ -0.72
CPD1YGR247W SEC20P28791 383 aa10.52□□□□□ -0.73
CPD1YGR247W GUA1P38625 525 aaKnown RBP10.52□□□□□ -0.73
CPD1YGR247W MSC2Q03455 724 aa10.52□□□□□ -0.73
CPD1YGR247W PHR1P05066 565 aaKnown RBP RIP-Chip data10.51□□□□□ -0.73not detected
CPD1YGR247W FMS1P50264 508 aa10.51□□□□□ -0.73
CPD1YGR247W YML020WQ03722 664 aa10.51□□□□□ -0.73
CPD1YGR247W CAD1P24813 409 aaKnown RBP10.5□□□□□ -0.73
CPD1YGR247W SKI2P35207 1287 aaKnown RBP RIP-Chip data10.5□□□□□ -0.73not detected
CPD1YGR247W ALD5P40047 520 aaKnown RBP10.5□□□□□ -0.73
CPD1YGR247W PTA1Q01329 785 aaPredicted RBP10.5□□□□□ -0.73
CPD1YGR247W SPN1Q06505 410 aaPredicted RBP10.5□□□□□ -0.73
CPD1YGR247W TFC8Q12308 588 aa10.5□□□□□ -0.73
CPD1YGR247W ATG11Q12527 1178 aa10.5□□□□□ -0.73
CPD1YGR247W SWI6P09959 803 aa10.49□□□□□ -0.73
CPD1YGR247W MAK31P23059 88 aa10.49□□□□□ -0.73
CPD1YGR247W NDT80P38830 627 aa10.49□□□□□ -0.73
CPD1YGR247W HDA1P53973 706 aa10.49□□□□□ -0.73
CPD1YGR247W MYO5Q04439 1219 aaKnown RBP10.49□□□□□ -0.73
CPD1YGR247W MOT1P32333 1867 aa10.49□□□□□ -0.73
CPD1YGR247W SRP54P20424 541 aaKnown RBP10.48□□□□□ -0.73
CPD1YGR247W AFT1P22149 690 aa10.48□□□□□ -0.73
CPD1YGR247W CRG1P38892 291 aaRIP-Chip data10.48□□□□□ -0.73not detected
CPD1YGR247W RPS7BP48164 190 aaKnown RBP10.48□□□□□ -0.73
CPD1YGR247W ECM16Q04217 1267 aaKnown RBP10.48□□□□□ -0.73
CPD1YGR247W YLR326WQ06170 240 aaKnown RBP10.48□□□□□ -0.73
CPD1YGR247W DAP1Q12091 152 aa10.48□□□□□ -0.73
CPD1YGR247W MYO1P08964 1928 aa10.48□□□□□ -0.73
CPD1YGR247W RER2P35196 286 aa10.47□□□□□ -0.73
CPD1YGR247W CTR1P49573 406 aa10.47□□□□□ -0.73
CPD1YGR247W MDM1Q01846 1127 aa10.47□□□□□ -0.73
CPD1YGR247W YLL058WQ12198 575 aa10.47□□□□□ -0.73
CPD1YGR247W UGA4P32837 571 aa10.46□□□□□ -0.73
CPD1YGR247W PRS1P32895 427 aaKnown RBP10.46□□□□□ -0.73
CPD1YGR247W TVP23P38962 199 aa10.46□□□□□ -0.73
CPD1YGR247W SPO74P45819 413 aa10.46□□□□□ -0.73
CPD1YGR247W IDI1P15496 288 aa10.45□□□□□ -0.74
CPD1YGR247W TPM2P40414 161 aa10.45□□□□□ -0.74
CPD1YGR247W CSM2P40465 213 aa10.45□□□□□ -0.74
CPD1YGR247W INP51P40559 946 aaKnown RBP10.45□□□□□ -0.74
CPD1YGR247W ALG2P43636 503 aa10.45□□□□□ -0.74
CPD1YGR247W UBP15P50101 1230 aa10.45□□□□□ -0.74
CPD1YGR247W YGR035CP53222 116 aa10.45□□□□□ -0.74
CPD1YGR247W RIM20Q12033 661 aa10.45□□□□□ -0.74
CPD1YGR247W SPT2P06843 333 aaPredicted RBP10.44□□□□□ -0.74
CPD1YGR247W RPL8AP17076 256 aaKnown RBP10.44□□□□□ -0.74
CPD1YGR247W PWP2P25635 923 aaKnown RBP10.44□□□□□ -0.74
CPD1YGR247W NKP2Q06162 153 aa10.44□□□□□ -0.74
CPD1YGR247W VIP1Q06685 1146 aaKnown RBP10.44□□□□□ -0.74
CPD1YGR247W FUB1P25659 250 aa10.43□□□□□ -0.74
CPD1YGR247W EMI2Q04409 500 aaKnown RBP10.43□□□□□ -0.74
CPD1YGR247W DSE3Q08729 430 aa10.43□□□□□ -0.74
CPD1YGR247W HMF1P40037 129 aaKnown RBP10.42□□□□□ -0.74
CPD1YGR247W SKY1Q03656 742 aa10.42□□□□□ -0.74
CPD1YGR247W TFC6Q06339 672 aa10.42□□□□□ -0.74
CPD1YGR247W POL3P15436 1097 aa10.41□□□□□ -0.74
CPD1YGR247W KIN82P25341 720 aa10.41□□□□□ -0.74
CPD1YGR247W FMP10P40098 244 aa10.41□□□□□ -0.74
CPD1YGR247W OYE3P41816 400 aaPredicted RBP10.41□□□□□ -0.74
CPD1YGR247W HUL5P53119 910 aa10.41□□□□□ -0.74
CPD1YGR247W MAP1Q01662 387 aaKnown RBP RIP-Chip data10.41□□□□□ -0.74not detected
CPD1YGR247W SMY2P32909 740 aaKnown RBP10.4□□□□□ -0.74
CPD1YGR247W TVP38P36164 337 aa10.4□□□□□ -0.74
CPD1YGR247W HEH2Q03281 663 aa10.4□□□□□ -0.74
CPD1YGR247W SES1P07284 462 aaKnown RBP10.39□□□□□ -0.75
CPD1YGR247W AAP1P37898 856 aaKnown RBP10.39□□□□□ -0.75
CPD1YGR247W RDH54P38086 958 aa10.39□□□□□ -0.75
CPD1YGR247W PAN5P38787 379 aa10.39□□□□□ -0.75
CPD1YGR247W MET13P53128 600 aa10.39□□□□□ -0.75
CPD1YGR247W FPR4Q06205 392 aaPredicted RBP10.39□□□□□ -0.75
CPD1YGR247W VAS1P07806 1104 aaKnown RBP10.38□□□□□ -0.75
CPD1YGR247W URK1P27515 501 aa10.38□□□□□ -0.75
CPD1YGR247W CLB5P30283 435 aa10.38□□□□□ -0.75
CPD1YGR247W RME1P32338 300 aaKnown RBP10.38□□□□□ -0.75
CPD1YGR247W IMP2'P32351 346 aa10.38□□□□□ -0.75
CPD1YGR247W CUS1Q02554 436 aaPredicted RBP10.38□□□□□ -0.75
CPD1YGR247W TPM1P17536 199 aaKnown RBP10.37□□□□□ -0.75
Retrieved 100 of 5,963 RNA–protein pairs in 19.9 ms