RNA–Protein interactions for RNA: YGR028W

MSP1, Transcript of Highly-conserved N-terminally anchored AAA-ATPase, yeastyeast

Gene MSP1, Length 1,089 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
MSP1YGR028W RPT4P53549 437 aaKnown RBP7.94□□□□□ -1.14
MSP1YGR028W CAF120P53836 1060 aa7.94□□□□□ -1.14
MSP1YGR028W TIM50Q02776 476 aa7.94□□□□□ -1.14
MSP1YGR028W DPH6Q12429 685 aa7.94□□□□□ -1.14
MSP1YGR028W RGA1P39083 1007 aa7.93□□□□□ -1.14
MSP1YGR028W ITC1P53125 1264 aa7.93□□□□□ -1.14
MSP1YGR028W RPP1AP05318 106 aaPredicted RBP7.92□□□□□ -1.14
MSP1YGR028W HPR1P17629 752 aaKnown RBP7.92□□□□□ -1.14
MSP1YGR028W SUI2P20459 304 aaKnown RBP7.92□□□□□ -1.14
MSP1YGR028W SHM1P37292 490 aaPredicted RBP7.92□□□□□ -1.14
MSP1YGR028W HXT5P38695 592 aa7.92□□□□□ -1.14
MSP1YGR028W SPL2P38839 148 aa7.92□□□□□ -1.14
MSP1YGR028W ICP55P40051 511 aa7.92□□□□□ -1.14
MSP1YGR028W YIR007WP40566 764 aa7.92□□□□□ -1.14
MSP1YGR028W THI3Q07471 609 aa7.92□□□□□ -1.14
MSP1YGR028W YDL176WQ12027 708 aa7.92□□□□□ -1.14
MSP1YGR028W PSH1Q12161 406 aa7.92□□□□□ -1.14
MSP1YGR028W RRG1Q12167 365 aaPredicted RBP7.92□□□□□ -1.14
MSP1YGR028W Q0182Q9ZZW1 134 aa7.92□□□□□ -1.14
MSP1YGR028W RPS31P05759 152 aaKnown RBP7.91□□□□□ -1.14
MSP1YGR028W PDC6P26263 563 aaKnown RBP7.91□□□□□ -1.14
MSP1YGR028W MGM1P32266 881 aa7.91□□□□□ -1.14
MSP1YGR028W SUV3P32580 737 aa7.91□□□□□ -1.14
MSP1YGR028W ETP1P38748 585 aaKnown RBP7.91□□□□□ -1.14
MSP1YGR028W YIL089WP40500 205 aa7.91□□□□□ -1.14
MSP1YGR028W YJR008WP47085 338 aa7.91□□□□□ -1.14
MSP1YGR028W RAD24P32641 659 aa7.9□□□□□ -1.14
MSP1YGR028W YGR117CP53270 476 aa7.9□□□□□ -1.14
MSP1YGR028W DUS1P53759 423 aaKnown RBP7.9□□□□□ -1.14
MSP1YGR028W NAM8Q00539 523 aaKnown RBP7.9□□□□□ -1.14
MSP1YGR028W PNP1Q05788 311 aa7.9□□□□□ -1.14
MSP1YGR028W FLO11P08640 1367 aa7.89□□□□□ -1.15
MSP1YGR028W LEU1P07264 779 aaKnown RBP7.89□□□□□ -1.15
MSP1YGR028W MLF3P32047 452 aa7.89□□□□□ -1.15
MSP1YGR028W RRN6P32786 894 aa7.89□□□□□ -1.15
MSP1YGR028W PEA2P40091 420 aa7.89□□□□□ -1.15
MSP1YGR028W YNL165WP53891 406 aa7.89□□□□□ -1.15
MSP1YGR028W SEN54Q02825 467 aaPredicted RBP7.89□□□□□ -1.15
MSP1YGR028W TOS4Q06266 489 aa7.89□□□□□ -1.15
MSP1YGR028W CDC3P32457 520 aaKnown RBP7.88□□□□□ -1.15
MSP1YGR028W NOP8Q08287 484 aaPredicted RBP7.88□□□□□ -1.15
MSP1YGR028W FIG2P25653 1609 aa7.88□□□□□ -1.15
MSP1YGR028W DIT1P21623 536 aa7.87□□□□□ -1.15
MSP1YGR028W YBR197CP38306 217 aa7.87□□□□□ -1.15
MSP1YGR028W YPL062WQ02781 134 aa7.87□□□□□ -1.15
MSP1YGR028W IRC4Q03036 179 aa7.87□□□□□ -1.15
MSP1YGR028W YMR265CQ03508 461 aaKnown RBP7.87□□□□□ -1.15
MSP1YGR028W UBX2Q04228 584 aa7.87□□□□□ -1.15
MSP1YGR028W CRF1Q04930 467 aa7.87□□□□□ -1.15
MSP1YGR028W SAC3P46674 1301 aa7.86□□□□□ -1.15
MSP1YGR028W PNT1P38969 423 aa7.86□□□□□ -1.15
MSP1YGR028W UBP12P39538 1254 aa7.86□□□□□ -1.15
MSP1YGR028W LYS5P50113 272 aa7.86□□□□□ -1.15
MSP1YGR028W CCP1P00431 361 aa7.85□□□□□ -1.15
MSP1YGR028W CBP1P07252 654 aa7.85□□□□□ -1.15
MSP1YGR028W LCB1P25045 558 aaKnown RBP7.85□□□□□ -1.15
MSP1YGR028W RPS7AP26786 190 aaKnown RBP7.85□□□□□ -1.15
MSP1YGR028W KAP122P32767 1081 aa7.85□□□□□ -1.15
MSP1YGR028W CUZ1P53899 274 aa7.85□□□□□ -1.15
MSP1YGR028W CSI1Q04368 295 aa7.85□□□□□ -1.15
MSP1YGR028W FAS2P19097 1887 aaKnown RBP7.85□□□□□ -1.15
MSP1YGR028W FUR4P05316 633 aaKnown RBP7.84□□□□□ -1.15
MSP1YGR028W MRPL33P20084 86 aa7.84□□□□□ -1.15
MSP1YGR028W PRP42Q03776 544 aaKnown RBP7.84□□□□□ -1.15
MSP1YGR028W MTC5Q03897 1148 aa7.84□□□□□ -1.15
MSP1YGR028W RGA2Q06407 1009 aa7.84□□□□□ -1.15
MSP1YGR028W SNU66Q12420 587 aaPredicted RBP7.84□□□□□ -1.15
MSP1YGR028W YDR461C-AQ2V2P7 80 aa7.84□□□□□ -1.15
MSP1YGR028W RGP1P16664 663 aa7.83□□□□□ -1.16
MSP1YGR028W ISC10P32645 267 aa7.83□□□□□ -1.16
MSP1YGR028W RPT3P33298 428 aaKnown RBP7.83□□□□□ -1.16
MSP1YGR028W CEM1P39525 442 aa7.83□□□□□ -1.16
MSP1YGR028W BOI2P39969 1040 aa7.83□□□□□ -1.16
MSP1YGR028W MRPL16P38064 232 aa7.82□□□□□ -1.16
MSP1YGR028W TPS3P38426 1054 aaKnown RBP7.82□□□□□ -1.16
MSP1YGR028W DYS1P38791 387 aa7.82□□□□□ -1.16
MSP1YGR028W VPS27P40343 622 aaKnown RBP7.82□□□□□ -1.16
MSP1YGR028W MTO1P53070 669 aa7.82□□□□□ -1.16
MSP1YGR028W LSO1Q3E827 93 aa7.82□□□□□ -1.16
MSP1YGR028W POM152P39685 1337 aa7.81□□□□□ -1.16
MSP1YGR028W RPP0P05317 312 aaKnown RBP7.81□□□□□ -1.16
MSP1YGR028W SUP35P05453 685 aaKnown RBP7.81□□□□□ -1.16
MSP1YGR028W YGR035CP53222 116 aa7.81□□□□□ -1.16
MSP1YGR028W KRE33P53914 1056 aaKnown RBP7.81□□□□□ -1.16
MSP1YGR028W STB3Q12427 513 aa7.81□□□□□ -1.16
MSP1YGR028W CSR2Q12734 1121 aa7.81□□□□□ -1.16
MSP1YGR028W HKR1P41809 1802 aa7.8□□□□□ -1.16
MSP1YGR028W DAL5P15365 543 aa7.8□□□□□ -1.16
MSP1YGR028W VMA3P25515 160 aa7.8□□□□□ -1.16
MSP1YGR028W LDH1P38139 375 aa7.8□□□□□ -1.16
MSP1YGR028W SKP1P52286 194 aa7.8□□□□□ -1.16
MSP1YGR028W MTC3P53077 123 aa7.8□□□□□ -1.16
MSP1YGR028W KAR5Q04746 504 aa7.8□□□□□ -1.16
MSP1YGR028W RVB2Q12464 471 aaKnown RBP7.8□□□□□ -1.16
MSP1YGR028W TIF6Q12522 245 aaKnown RBP7.8□□□□□ -1.16
MSP1YGR028W HVG1P0CE11 249 aa7.79□□□□□ -1.16
MSP1YGR028W QDR2P40474 542 aa7.79□□□□□ -1.16
MSP1YGR028W SPR3P41901 512 aa7.79□□□□□ -1.16
MSP1YGR028W WRS1Q12109 432 aaKnown RBP7.79□□□□□ -1.16
MSP1YGR028W RPC31P17890 251 aa7.78□□□□□ -1.16
Retrieved 100 of 5,963 RNA–protein pairs in 96.9 ms