RNA–Protein interactions for RNA: YDR528W

HLR1, Transcript of Protein involved in regulation of cell wall composition and integrity, yeast

Gene HLR1, Length 1,272 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
HLR1	YDR528W	RVS167	P39743	482 aa	Known RBP	4.86	□□□□□ -1.63
HLR1	YDR528W	GTS1	P40956	396 aa		4.86	□□□□□ -1.63
HLR1	YDR528W	YGR045C	P53229	120 aa		4.86	□□□□□ -1.63
HLR1	YDR528W	MRPL22	P53881	309 aa		4.86	□□□□□ -1.63
HLR1	YDR528W	OXR1	Q08952	273 aa		4.86	□□□□□ -1.63
HLR1	YDR528W	SNU71	P53207	620 aa	Known RBP	4.85	□□□□□ -1.63
HLR1	YDR528W	YCS4	Q06156	1176 aa		4.85	□□□□□ -1.63
HLR1	YDR528W	RRP15	Q06511	250 aa	Predicted RBP	4.85	□□□□□ -1.63
HLR1	YDR528W	RPT1	P33299	467 aa	Known RBP	4.84	□□□□□ -1.63
HLR1	YDR528W	EXO5	P38289	585 aa		4.84	□□□□□ -1.63
HLR1	YDR528W	ETP1	P38748	585 aa	Known RBP	4.84	□□□□□ -1.63
HLR1	YDR528W	ATE1	P16639	503 aa		4.83	□□□□□ -1.64
HLR1	YDR528W	DAK2	P43550	591 aa		4.83	□□□□□ -1.64
HLR1	YDR528W	RIM8	P53179	542 aa		4.83	□□□□□ -1.64
HLR1	YDR528W	GIS1	Q03833	894 aa		4.83	□□□□□ -1.64
HLR1	YDR528W	KAR2	P16474	682 aa	Known RBP	4.82	□□□□□ -1.64
HLR1	YDR528W	UGA4	P32837	571 aa		4.82	□□□□□ -1.64
HLR1	YDR528W	PRP40	P33203	583 aa	Known RBP	4.82	□□□□□ -1.64
HLR1	YDR528W	YJR107W	P47145	328 aa		4.82	□□□□□ -1.64
HLR1	YDR528W	AVO1	Q08236	1176 aa		4.82	□□□□□ -1.64
HLR1	YDR528W	TOD6	P34219	525 aa		4.81	□□□□□ -1.64
HLR1	YDR528W	NNK1	P36003	928 aa		4.81	□□□□□ -1.64
HLR1	YDR528W	YKL077W	P36081	392 aa		4.81	□□□□□ -1.64
HLR1	YDR528W	ARL1	P38116	183 aa	Known RBP	4.81	□□□□□ -1.64
HLR1	YDR528W	SLS1	P42900	643 aa		4.81	□□□□□ -1.64
HLR1	YDR528W	TOS4	Q06266	489 aa		4.81	□□□□□ -1.64
HLR1	YDR528W	NEM1	P38757	446 aa		4.8	□□□□□ -1.64
HLR1	YDR528W	SHU2	P38957	223 aa		4.8	□□□□□ -1.64
HLR1	YDR528W	NOG1	Q02892	647 aa	Known RBP	4.8	□□□□□ -1.64
HLR1	YDR528W	DAL4	Q04895	635 aa		4.8	□□□□□ -1.64
HLR1	YDR528W	PUS7	Q08647	676 aa	Known RBP	4.8	□□□□□ -1.64
HLR1	YDR528W	YPL277C	Q08989	487 aa		4.8	□□□□□ -1.64
HLR1	YDR528W	MSH3	P25336	1018 aa		4.79	□□□□□ -1.64
HLR1	YDR528W	SEC8	P32855	1065 aa		4.79	□□□□□ -1.64
HLR1	YDR528W	YGR122W	P53272	402 aa		4.79	□□□□□ -1.64
HLR1	YDR528W	ULP1	Q02724	621 aa		4.79	□□□□□ -1.64
HLR1	YDR528W	TPP1	Q03796	238 aa		4.79	□□□□□ -1.64
HLR1	YDR528W	SOD2	P00447	233 aa		4.78	□□□□□ -1.64
HLR1	YDR528W	NAP1	P25293	417 aa	Known RBP	4.78	□□□□□ -1.64
HLR1	YDR528W	NMD3	P38861	518 aa	Known RBP	4.78	□□□□□ -1.64
HLR1	YDR528W	RSM26	P47141	266 aa		4.78	□□□□□ -1.64
HLR1	YDR528W	NOP7	P53261	605 aa	Known RBP	4.78	□□□□□ -1.64
HLR1	YDR528W	PEX13	P80667	386 aa		4.78	□□□□□ -1.64
HLR1	YDR528W	RMD1	Q03441	430 aa		4.78	□□□□□ -1.64
HLR1	YDR528W	OYE2	Q03558	400 aa	Known RBP	4.78	□□□□□ -1.64
HLR1	YDR528W	SVF1	Q05515	481 aa		4.78	□□□□□ -1.64
HLR1	YDR528W	RPS13	P05756	151 aa	Known RBP	4.77	□□□□□ -1.65
HLR1	YDR528W	FAA3	P39002	694 aa		4.77	□□□□□ -1.65
HLR1	YDR528W	MTR4	P47047	1073 aa	Known RBP	4.77	□□□□□ -1.65
HLR1	YDR528W	UTP5	Q04177	643 aa	Known RBP	4.77	□□□□□ -1.65
HLR1	YDR528W	HXK1	P04806	485 aa	Known RBP	4.76	□□□□□ -1.65
HLR1	YDR528W	YAR028W	P39548	234 aa		4.76	□□□□□ -1.65
HLR1	YDR528W	ESF1	Q06344	628 aa	Known RBP	4.76	□□□□□ -1.65
HLR1	YDR528W	MCD1	Q12158	566 aa		4.76	□□□□□ -1.65
HLR1	YDR528W	SAM35	P14693	329 aa		4.75	□□□□□ -1.65
HLR1	YDR528W	SQT1	P35184	431 aa		4.75	□□□□□ -1.65
HLR1	YDR528W	PEX28	P38848	579 aa		4.75	□□□□□ -1.65
HLR1	YDR528W	RPS26A	P39938	119 aa	Known RBP	4.75	□□□□□ -1.65
HLR1	YDR528W	RPS26B	P39939	119 aa	Known RBP	4.75	□□□□□ -1.65
HLR1	YDR528W	FYV10	P40492	516 aa		4.75	□□□□□ -1.65
HLR1	YDR528W	XKS1	P42826	600 aa		4.75	□□□□□ -1.65
HLR1	YDR528W	RAD2	P07276	1031 aa		4.74	□□□□□ -1.65
HLR1	YDR528W	CYC8	P14922	966 aa		4.74	□□□□□ -1.65
HLR1	YDR528W	MCM2	P29469	868 aa		4.74	□□□□□ -1.65
HLR1	YDR528W	MRPS18	P42847	217 aa		4.74	□□□□□ -1.65
HLR1	YDR528W	YPL109C	Q02981	657 aa		4.74	□□□□□ -1.65
HLR1	YDR528W	ADI1	Q03677	179 aa		4.74	□□□□□ -1.65
HLR1	YDR528W	CLU1	Q03690	1277 aa	Known RBP	4.74	□□□□□ -1.65
HLR1	YDR528W	VMA4	P22203	233 aa	Known RBP	4.73	□□□□□ -1.65
HLR1	YDR528W	PEP7	P32609	515 aa		4.73	□□□□□ -1.65
HLR1	YDR528W	ABZ1	P37254	787 aa	Predicted RBP	4.73	□□□□□ -1.65
HLR1	YDR528W	PAM1	P37304	830 aa	Known RBP	4.73	□□□□□ -1.65
HLR1	YDR528W	RDH54	P38086	958 aa		4.73	□□□□□ -1.65
HLR1	YDR528W	YHL012W	P38709	493 aa		4.73	□□□□□ -1.65
HLR1	YDR528W	SNO2	P53823	222 aa		4.73	□□□□□ -1.65
HLR1	YDR528W	GSF2	Q04697	403 aa	Known RBP	4.73	□□□□□ -1.65
HLR1	YDR528W	SPR28	Q04921	423 aa		4.73	□□□□□ -1.65
HLR1	YDR528W	YLR257W	Q06146	321 aa	Known RBP	4.73	□□□□□ -1.65
HLR1	YDR528W	SCP160	P06105	1222 aa	Known RBP RIP-Chip data	4.72	□□□□□ -1.65	not detected
HLR1	YDR528W	HEM13	P11353	328 aa	Known RBP	4.72	□□□□□ -1.65
HLR1	YDR528W	RET1	P22276	1149 aa	Known RBP	4.72	□□□□□ -1.65
HLR1	YDR528W	PRE9	P23638	258 aa	Known RBP	4.72	□□□□□ -1.65
HLR1	YDR528W	SHM2	P37291	469 aa	Known RBP	4.72	□□□□□ -1.65
HLR1	YDR528W	FOL2	P51601	243 aa	Known RBP	4.72	□□□□□ -1.65
HLR1	YDR528W	YGL140C	P53120	1219 aa		4.72	□□□□□ -1.65
HLR1	YDR528W	CTS1	P29029	562 aa		4.71	□□□□□ -1.66
HLR1	YDR528W	AIM26	P32858	118 aa		4.71	□□□□□ -1.66
HLR1	YDR528W	PIC2	P40035	300 aa		4.71	□□□□□ -1.66
HLR1	YDR528W	YNR063W	P53749	607 aa		4.71	□□□□□ -1.66
HLR1	YDR528W	RSA3	Q05942	220 aa	Known RBP	4.71	□□□□□ -1.66
HLR1	YDR528W	TAF13	P11747	167 aa		4.7	□□□□□ -1.66
HLR1	YDR528W	SEC23	P15303	768 aa	Known RBP	4.7	□□□□□ -1.66
HLR1	YDR528W	MDL2	P33311	773 aa		4.7	□□□□□ -1.66
HLR1	YDR528W	PET112	P33893	541 aa		4.7	□□□□□ -1.66
HLR1	YDR528W	MET10	P39692	1035 aa		4.7	□□□□□ -1.66
HLR1	YDR528W	YLR358C	O13565	187 aa		4.69	□□□□□ -1.66
HLR1	YDR528W	TUB2	P02557	457 aa	Known RBP	4.69	□□□□□ -1.66
HLR1	YDR528W	CLN2	P20438	545 aa		4.69	□□□□□ -1.66
HLR1	YDR528W	MNR2	P35724	969 aa		4.69	□□□□□ -1.66
HLR1	YDR528W	ADD66	P36040	267 aa		4.69	□□□□□ -1.66

Retrieved 100 of 5,963 RNA–protein pairs in 83 ms