RNA–Protein interactions for RNA: YDR378C

LSM6, Transcript of Lsm (Like Sm) protein, yeastyeast

Gene LSM6, Length 261 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
LSM6YDR378C LYP1P32487 611 aa7.11□□□□□ -1.27
LSM6YDR378C MKK2P32491 506 aa7.11□□□□□ -1.27
LSM6YDR378C SFA1P32771 386 aa7.11□□□□□ -1.27
LSM6YDR378C MCX1P38323 520 aaPredicted RBP7.11□□□□□ -1.27
LSM6YDR378C YGR045CP53229 120 aa7.11□□□□□ -1.27
LSM6YDR378C DOT1Q04089 582 aaKnown RBP7.11□□□□□ -1.27
LSM6YDR378C TDA6Q06466 467 aa7.11□□□□□ -1.27
LSM6YDR378C TY1A-NL1Q12391 440 aaKnown RBP7.11□□□□□ -1.27
LSM6YDR378C AIM44Q99299 758 aa7.11□□□□□ -1.27
LSM6YDR378C TRP2P00899 507 aaKnown RBP7.1□□□□□ -1.27
LSM6YDR378C BAS1P22035 811 aa7.1□□□□□ -1.27
LSM6YDR378C SYP1P25623 870 aaKnown RBP7.1□□□□□ -1.27
LSM6YDR378C RSC6P25632 483 aa7.1□□□□□ -1.27
LSM6YDR378C YFL066CP43538 392 aa7.1□□□□□ -1.27
LSM6YDR378C YJL049WP47048 450 aa7.1□□□□□ -1.27
LSM6YDR378C BUD9P53226 547 aa7.1□□□□□ -1.27
LSM6YDR378C ELA1P53861 379 aaPredicted RBP7.1□□□□□ -1.27
LSM6YDR378C NCE103P53615 221 aa7.09□□□□□ -1.27
LSM6YDR378C TDA5Q06417 326 aaKnown RBP7.09□□□□□ -1.27
LSM6YDR378C GAS5Q08193 484 aa7.09□□□□□ -1.27
LSM6YDR378C YOL098CQ12496 1037 aa7.09□□□□□ -1.27
LSM6YDR378C GRX1P25373 110 aaKnown RBP7.08□□□□□ -1.28
LSM6YDR378C MDJ1P35191 511 aa7.08□□□□□ -1.28
LSM6YDR378C VPS53P47061 822 aa7.08□□□□□ -1.28
LSM6YDR378C RAT1Q02792 1006 aaKnown RBP7.08□□□□□ -1.28
LSM6YDR378C PTC5Q12511 572 aa7.08□□□□□ -1.28
LSM6YDR378C YTA7P40340 1379 aa7.08□□□□□ -1.28
LSM6YDR378C CNN1P43618 361 aa7.07□□□□□ -1.28
LSM6YDR378C ORC1P54784 914 aaPredicted RBP7.07□□□□□ -1.28
LSM6YDR378C AI3P03877 415 aa7.06□□□□□ -1.28
LSM6YDR378C NNK1P36003 928 aa7.06□□□□□ -1.28
LSM6YDR378C GPT2P36148 743 aa7.06□□□□□ -1.28
LSM6YDR378C ALG3P38179 458 aa7.06□□□□□ -1.28
LSM6YDR378C SNF7P39929 240 aaKnown RBP7.06□□□□□ -1.28
LSM6YDR378C SPF1P39986 1215 aaKnown RBP7.06□□□□□ -1.28
LSM6YDR378C YMR187CQ03236 431 aa7.06□□□□□ -1.28
LSM6YDR378C INO1P11986 533 aa7.05□□□□□ -1.28
LSM6YDR378C DBP5P20449 482 aaKnown RBP7.05□□□□□ -1.28
LSM6YDR378C SRP40P32583 406 aaPredicted RBP7.05□□□□□ -1.28
LSM6YDR378C AFG2P32794 780 aa7.05□□□□□ -1.28
LSM6YDR378C MCM7P38132 845 aa7.05□□□□□ -1.28
LSM6YDR378C PRY1P47032 299 aa7.05□□□□□ -1.28
LSM6YDR378C TIF35Q04067 274 aaKnown RBP7.05□□□□□ -1.28
LSM6YDR378C YLR225CQ05948 407 aaKnown RBP7.05□□□□□ -1.28
LSM6YDR378C PHM7Q12252 991 aa7.05□□□□□ -1.28
LSM6YDR378C RET1P22276 1149 aaKnown RBP7.04□□□□□ -1.28
LSM6YDR378C NFS1P25374 497 aa7.04□□□□□ -1.28
LSM6YDR378C AGP1P25376 633 aa7.04□□□□□ -1.28
LSM6YDR378C YKL069WP36088 180 aa7.04□□□□□ -1.28
LSM6YDR378C MSH4P40965 878 aaPredicted RBP7.04□□□□□ -1.28
LSM6YDR378C NAN1Q02931 896 aaKnown RBP7.04□□□□□ -1.28
LSM6YDR378C SBA1P28707 216 aaKnown RBP7.03□□□□□ -1.28
LSM6YDR378C ABD1P32783 436 aaPredicted RBP7.03□□□□□ -1.28
LSM6YDR378C SMY2P32909 740 aaKnown RBP7.03□□□□□ -1.28
LSM6YDR378C MOT2P34909 587 aaKnown RBP7.03□□□□□ -1.28
LSM6YDR378C TAT1P38085 619 aa7.03□□□□□ -1.28
LSM6YDR378C RGD1P38339 666 aa7.03□□□□□ -1.28
LSM6YDR378C QNS1P38795 714 aaKnown RBP7.03□□□□□ -1.28
LSM6YDR378C HNT2P49775 206 aa7.03□□□□□ -1.28
LSM6YDR378C ARI1P53111 347 aaKnown RBP7.03□□□□□ -1.28
LSM6YDR378C RSA3Q05942 220 aaKnown RBP7.03□□□□□ -1.28
LSM6YDR378C YLR257WQ06146 321 aaKnown RBP7.03□□□□□ -1.28
LSM6YDR378C GIC2Q06648 383 aa7.03□□□□□ -1.28
LSM6YDR378C RKM4Q12504 494 aa7.03□□□□□ -1.28
LSM6YDR378C STI1P15705 589 aaKnown RBP RIP-Chip data7.02□□□□□ -1.29not detected
LSM6YDR378C ICP55P40051 511 aa7.02□□□□□ -1.29
LSM6YDR378C SHE9Q04172 456 aa7.02□□□□□ -1.29
LSM6YDR378C AOS1Q06624 347 aa7.02□□□□□ -1.29
LSM6YDR378C YDR215CQ12240 137 aa7.02□□□□□ -1.29
LSM6YDR378C YPR053CQ6Q5F3 151 aa7.02□□□□□ -1.29
LSM6YDR378C MLS1P30952 554 aa7.01□□□□□ -1.29
LSM6YDR378C PIN4P34217 668 aaKnown RBP RIP-Chip data7.01□□□□□ -1.29 RIP-Chip
LSM6YDR378C YKL107WP34251 309 aa7.01□□□□□ -1.29
LSM6YDR378C NSE3Q05541 303 aa7.01□□□□□ -1.29
LSM6YDR378C FPR4Q06205 392 aaPredicted RBP7.01□□□□□ -1.29
LSM6YDR378C HRK1Q08732 759 aaKnown RBP7.01□□□□□ -1.29
LSM6YDR378C YPL260WQ08977 551 aa7.01□□□□□ -1.29
LSM6YDR378C CDC53Q12018 815 aaKnown RBP7.01□□□□□ -1.29
LSM6YDR378C YOR131CQ12486 218 aa7.01□□□□□ -1.29
LSM6YDR378C PUF4P25339 888 aaKnown RBP RIP-Chip data7□□□□□ -1.29not detected
LSM6YDR378C YKL091CP33324 310 aaKnown RBP7□□□□□ -1.29
LSM6YDR378C MRP8P35719 219 aa7□□□□□ -1.29
LSM6YDR378C SEA4P38164 1038 aa7□□□□□ -1.29
LSM6YDR378C SLN1P39928 1220 aaPredicted RBP7□□□□□ -1.29
LSM6YDR378C YGL176CP46945 554 aa7□□□□□ -1.29
LSM6YDR378C ESC2Q06340 456 aa7□□□□□ -1.29
LSM6YDR378C RPS4AP0CX35 261 aaKnown RBP6.99□□□□□ -1.29
LSM6YDR378C RPS4BP0CX36 261 aaKnown RBP6.99□□□□□ -1.29
LSM6YDR378C RAD4P14736 754 aa6.99□□□□□ -1.29
LSM6YDR378C YCK2P23292 546 aaKnown RBP6.99□□□□□ -1.29
LSM6YDR378C VBA5P36172 582 aa6.99□□□□□ -1.29
LSM6YDR378C MPH1P40562 993 aa6.99□□□□□ -1.29
LSM6YDR378C IOC3P43596 787 aa6.99□□□□□ -1.29
LSM6YDR378C SPO75Q07798 868 aa6.99□□□□□ -1.29
LSM6YDR378C KIP1P28742 1111 aa6.98□□□□□ -1.29
LSM6YDR378C YBR184WP38299 523 aa6.98□□□□□ -1.29
LSM6YDR378C TAT2P38967 592 aa6.98□□□□□ -1.29
LSM6YDR378C IRR1P40541 1150 aa6.98□□□□□ -1.29
LSM6YDR378C TIM54P47045 478 aa6.98□□□□□ -1.29
LSM6YDR378C ALT1P52893 592 aa6.98□□□□□ -1.29
Retrieved 100 of 5,963 RNA–protein pairs in 24.2 ms