RNA–Protein interactions for RNA: YDR001C

NTH1, Transcript of Neutral trehalase, degrades trehalose, yeast

Gene NTH1, Length 2,256 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
NTH1	YDR001C	SEC3	P33332	1336 aa	Known RBP	5	□□□□□ -1.61
NTH1	YDR001C	NEM1	P38757	446 aa		5	□□□□□ -1.61
NTH1	YDR001C	ACO2	P39533	789 aa		5	□□□□□ -1.61
NTH1	YDR001C	UTP22	P53254	1237 aa	Predicted RBP	5	□□□□□ -1.61
NTH1	YDR001C	FLC1	Q08967	793 aa		5	□□□□□ -1.61
NTH1	YDR001C	CLC1	P17891	233 aa		4.99	□□□□□ -1.61
NTH1	YDR001C	LYP1	P32487	611 aa		4.99	□□□□□ -1.61
NTH1	YDR001C	RRP14	P36080	434 aa	Known RBP	4.99	□□□□□ -1.61
NTH1	YDR001C	VBA5	P36172	582 aa		4.99	□□□□□ -1.61
NTH1	YDR001C	ENT3	P47160	408 aa		4.99	□□□□□ -1.61
NTH1	YDR001C	SHE9	Q04172	456 aa		4.99	□□□□□ -1.61
NTH1	YDR001C	DED1	P06634	604 aa	Known RBP	4.99	□□□□□ -1.61
NTH1	YDR001C	NEO1	P40527	1151 aa		4.99	□□□□□ -1.61
NTH1	YDR001C	PFD1	P46988	109 aa		4.99	□□□□□ -1.61
NTH1	YDR001C	SOK2	P53438	785 aa	Predicted RBP	4.99	□□□□□ -1.61
NTH1	YDR001C	UBP3	Q01477	912 aa	Known RBP RIP-Chip data	4.99	□□□□□ -1.61	not detected
NTH1	YDR001C	RAT1	Q02792	1006 aa	Known RBP	4.99	□□□□□ -1.61
NTH1	YDR001C	TIF35	Q04067	274 aa	Known RBP	4.99	□□□□□ -1.61
NTH1	YDR001C	EST2	Q06163	884 aa		4.99	□□□□□ -1.61
NTH1	YDR001C	SCP160	P06105	1222 aa	Known RBP RIP-Chip data	4.98	□□□□□ -1.61	not detected
NTH1	YDR001C	TIM23	P32897	222 aa		4.98	□□□□□ -1.61
NTH1	YDR001C	CEM1	P39525	442 aa		4.98	□□□□□ -1.61
NTH1	YDR001C	NUP82	P40368	713 aa		4.98	□□□□□ -1.61
NTH1	YDR001C	FAR11	P53917	953 aa		4.98	□□□□□ -1.61
NTH1	YDR001C	RPL8B	P29453	256 aa	Known RBP	4.98	□□□□□ -1.61
NTH1	YDR001C	MOT2	P34909	587 aa	Known RBP	4.98	□□□□□ -1.61
NTH1	YDR001C	ADD66	P36040	267 aa		4.98	□□□□□ -1.61
NTH1	YDR001C	RSP5	P39940	809 aa	Known RBP	4.98	□□□□□ -1.61
NTH1	YDR001C	POL5	P39985	1022 aa	Known RBP	4.98	□□□□□ -1.61
NTH1	YDR001C	IRR1	P40541	1150 aa		4.98	□□□□□ -1.61
NTH1	YDR001C	SPO20	Q04359	397 aa		4.98	□□□□□ -1.61
NTH1	YDR001C	YPL066W	Q12194	479 aa		4.98	□□□□□ -1.61
NTH1	YDR001C	TRM732	Q03496	1420 aa		4.97	□□□□□ -1.61
NTH1	YDR001C	NAR1	P23503	491 aa	Known RBP	4.97	□□□□□ -1.61
NTH1	YDR001C	GIP2	P40036	548 aa		4.97	□□□□□ -1.61
NTH1	YDR001C	LEM3	P42838	414 aa		4.97	□□□□□ -1.61
NTH1	YDR001C	YGR125W	P53273	1036 aa		4.97	□□□□□ -1.61
NTH1	YDR001C	QCR6	P00127	147 aa		4.97	□□□□□ -1.61
NTH1	YDR001C	PDC5	P16467	563 aa	Known RBP	4.97	□□□□□ -1.61
NTH1	YDR001C	SYP1	P25623	870 aa	Known RBP	4.97	□□□□□ -1.61
NTH1	YDR001C	SBA1	P28707	216 aa	Known RBP	4.97	□□□□□ -1.61
NTH1	YDR001C	AFG2	P32794	780 aa		4.97	□□□□□ -1.61
NTH1	YDR001C	PRS1	P32895	427 aa	Known RBP	4.97	□□□□□ -1.61
NTH1	YDR001C	PAN5	P38787	379 aa		4.97	□□□□□ -1.61
NTH1	YDR001C	CAF120	P53836	1060 aa		4.97	□□□□□ -1.61
NTH1	YDR001C	SPT7	P35177	1332 aa		4.96	□□□□□ -1.62
NTH1	YDR001C	CHZ1	P40019	153 aa	Predicted RBP	4.96	□□□□□ -1.62
NTH1	YDR001C	SPO75	Q07798	868 aa		4.96	□□□□□ -1.62
NTH1	YDR001C	FMP25	Q08023	583 aa		4.96	□□□□□ -1.62
NTH1	YDR001C	MET6	P05694	767 aa	Known RBP	4.95	□□□□□ -1.62
NTH1	YDR001C	SBP1	P10080	294 aa	Known RBP	4.95	□□□□□ -1.62
NTH1	YDR001C	INO1	P11986	533 aa		4.95	□□□□□ -1.62
NTH1	YDR001C	PUF4	P25339	888 aa	Known RBP RIP-Chip data	4.95	□□□□□ -1.62	not detected
NTH1	YDR001C	KNS1	P32350	737 aa	Predicted RBP	4.95	□□□□□ -1.62
NTH1	YDR001C	MEC3	Q02574	474 aa		4.95	□□□□□ -1.62
NTH1	YDR001C	GIS4	Q04233	774 aa		4.95	□□□□□ -1.62
NTH1	YDR001C	IKI3	Q06706	1349 aa	Known RBP	4.95	□□□□□ -1.62
NTH1	YDR001C	GPM1	P00950	247 aa	Known RBP	4.95	□□□□□ -1.62
NTH1	YDR001C	CAN1	P04817	590 aa		4.95	□□□□□ -1.62
NTH1	YDR001C	IME2	P32581	645 aa		4.95	□□□□□ -1.62
NTH1	YDR001C	MRP8	P35719	219 aa		4.95	□□□□□ -1.62
NTH1	YDR001C	ARL1	P38116	183 aa	Known RBP	4.95	□□□□□ -1.62
NTH1	YDR001C	AOS1	Q06624	347 aa		4.95	□□□□□ -1.62
NTH1	YDR001C	ERR1	P0CX10	437 aa		4.94	□□□□□ -1.62
NTH1	YDR001C	ERR2	P0CX11	437 aa		4.94	□□□□□ -1.62
NTH1	YDR001C	TED1	P40533	473 aa		4.94	□□□□□ -1.62
NTH1	YDR001C	CNN1	P43618	361 aa		4.94	□□□□□ -1.62
NTH1	YDR001C	SPO74	P45819	413 aa		4.94	□□□□□ -1.62
NTH1	YDR001C	MTR4	P47047	1073 aa	Known RBP	4.94	□□□□□ -1.62
NTH1	YDR001C	GCV1	P48015	400 aa		4.94	□□□□□ -1.62
NTH1	YDR001C	SPO71	Q03868	1245 aa		4.94	□□□□□ -1.62
NTH1	YDR001C	EAF1	Q06337	982 aa		4.94	□□□□□ -1.62
NTH1	YDR001C	PEP1	P32319	1579 aa		4.94	□□□□□ -1.62
NTH1	YDR001C	DBP5	P20449	482 aa	Known RBP	4.94	□□□□□ -1.62
NTH1	YDR001C	FPR3	P38911	411 aa	Known RBP	4.94	□□□□□ -1.62
NTH1	YDR001C	MPH1	P40562	993 aa		4.94	□□□□□ -1.62
NTH1	YDR001C	YGL176C	P46945	554 aa		4.94	□□□□□ -1.62
NTH1	YDR001C	YNR063W	P53749	607 aa		4.94	□□□□□ -1.62
NTH1	YDR001C	RKM2	Q03942	479 aa		4.94	□□□□□ -1.62
NTH1	YDR001C	SLP1	Q12232	587 aa		4.94	□□□□□ -1.62
NTH1	YDR001C	OSH2	Q12451	1283 aa		4.94	□□□□□ -1.62
NTH1	YDR001C	TY4B-P	A0A0B7P3V8	1104 aa		4.93	□□□□□ -1.62
NTH1	YDR001C	PHO8	P11491	566 aa		4.93	□□□□□ -1.62
NTH1	YDR001C	ERS1	P17261	260 aa		4.93	□□□□□ -1.62
NTH1	YDR001C	HSP60	P19882	572 aa	Known RBP	4.93	□□□□□ -1.62
NTH1	YDR001C	PGM2	P37012	569 aa	Known RBP	4.93	□□□□□ -1.62
NTH1	YDR001C	PBY1	P38254	753 aa		4.93	□□□□□ -1.62
NTH1	YDR001C	REI1	P38344	393 aa	Predicted RBP	4.93	□□□□□ -1.62
NTH1	YDR001C	MBP1	P39678	833 aa		4.93	□□□□□ -1.62
NTH1	YDR001C	RKM4	Q12504	494 aa		4.93	□□□□□ -1.62
NTH1	YDR001C	TY4A-H	Q6Q5P6	413 aa		4.93	□□□□□ -1.62
NTH1	YDR001C	CIT1	P00890	479 aa		4.93	□□□□□ -1.62
NTH1	YDR001C	ALG3	P38179	458 aa		4.93	□□□□□ -1.62
NTH1	YDR001C	MNN1	P39106	762 aa		4.93	□□□□□ -1.62
NTH1	YDR001C	ALG6	Q12001	544 aa	Known RBP	4.93	□□□□□ -1.62
NTH1	YDR001C	YDL176W	Q12027	708 aa		4.93	□□□□□ -1.62
NTH1	YDR001C	PIN4	P34217	668 aa	Known RBP RIP-Chip data	4.92	□□□□□ -1.62	not detected
NTH1	YDR001C	ERP6	P53198	216 aa		4.92	□□□□□ -1.62
NTH1	YDR001C	UTP8	P53276	713 aa	Known RBP	4.92	□□□□□ -1.62
NTH1	YDR001C	TAF8	Q03750	510 aa		4.92	□□□□□ -1.62

Retrieved 100 of 5,963 RNA–protein pairs in 36.6 ms