RNA–Protein interactions for RNA: YDL042C

SIR2, Transcript of Conserved NAD+ dependent histone deacetylase of the Sirtuin family, yeast

Gene SIR2, Length 1,689 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
SIR2	YDL042C	SPO20	Q04359	397 aa		8.18	□□□□□ -1.1
SIR2	YDL042C	SBE2	P42223	864 aa	Known RBP	8.17	□□□□□ -1.1
SIR2	YDL042C	AVO1	Q08236	1176 aa		8.17	□□□□□ -1.1
SIR2	YDL042C	SRP40	P32583	406 aa	Predicted RBP	8.16	□□□□□ -1.1
SIR2	YDL042C	SPF1	P39986	1215 aa	Known RBP	8.16	□□□□□ -1.1
SIR2	YDL042C	KIP3	P53086	805 aa	Known RBP	8.16	□□□□□ -1.1
SIR2	YDL042C	RAT1	Q02792	1006 aa	Known RBP	8.16	□□□□□ -1.1
SIR2	YDL042C	SYP1	P25623	870 aa	Known RBP	8.15	□□□□□ -1.1
SIR2	YDL042C	YAR028W	P39548	234 aa		8.15	□□□□□ -1.1
SIR2	YDL042C	KRI1	P42846	591 aa	Known RBP	8.15	□□□□□ -1.1
SIR2	YDL042C	IOC3	P43596	787 aa		8.15	□□□□□ -1.1
SIR2	YDL042C	LAP2	Q10740	671 aa		8.15	□□□□□ -1.1
SIR2	YDL042C	YOR223W	Q12015	292 aa		8.15	□□□□□ -1.1
SIR2	YDL042C	TAT2	P38967	592 aa		8.14	□□□□□ -1.11
SIR2	YDL042C	YGR045C	P53229	120 aa		8.14	□□□□□ -1.11
SIR2	YDL042C	NSE3	Q05541	303 aa		8.14	□□□□□ -1.11
SIR2	YDL042C	FPR4	Q06205	392 aa	Predicted RBP	8.14	□□□□□ -1.11
SIR2	YDL042C	TIF35	Q04067	274 aa	Known RBP	8.13	□□□□□ -1.11
SIR2	YDL042C	YLR225C	Q05948	407 aa	Known RBP	8.13	□□□□□ -1.11
SIR2	YDL042C	AGP1	P25376	633 aa		8.12	□□□□□ -1.11
SIR2	YDL042C	AFG2	P32794	780 aa		8.12	□□□□□ -1.11
SIR2	YDL042C	CNN1	P43618	361 aa		8.12	□□□□□ -1.11
SIR2	YDL042C	NAN1	Q02931	896 aa	Known RBP	8.12	□□□□□ -1.11
SIR2	YDL042C	DOT1	Q04089	582 aa	Known RBP	8.12	□□□□□ -1.11
SIR2	YDL042C	THI72	Q08579	599 aa		8.12	□□□□□ -1.11
SIR2	YDL042C	TY1A-NL1	Q12391	440 aa	Known RBP	8.12	□□□□□ -1.11
SIR2	YDL042C	STI1	P15705	589 aa	Known RBP RIP-Chip data	8.11	□□□□□ -1.11	not detected
SIR2	YDL042C	ABD1	P32783	436 aa	Predicted RBP	8.11	□□□□□ -1.11
SIR2	YDL042C	SEA4	P38164	1038 aa		8.11	□□□□□ -1.11
SIR2	YDL042C	ALG3	P38179	458 aa		8.11	□□□□□ -1.11
SIR2	YDL042C	HSE1	P38753	452 aa		8.11	□□□□□ -1.11
SIR2	YDL042C	ELA1	P53861	379 aa	Predicted RBP	8.11	□□□□□ -1.11
SIR2	YDL042C	ESC2	Q06340	456 aa		8.11	□□□□□ -1.11
SIR2	YDL042C	CDC53	Q12018	815 aa	Known RBP	8.11	□□□□□ -1.11
SIR2	YDL042C	DBP5	P20449	482 aa	Known RBP	8.11	□□□□□ -1.11
SIR2	YDL042C	YKL091C	P33324	310 aa	Known RBP	8.11	□□□□□ -1.11
SIR2	YDL042C	MOT2	P34909	587 aa	Known RBP	8.11	□□□□□ -1.11
SIR2	YDL042C	GAS5	Q08193	484 aa		8.11	□□□□□ -1.11
SIR2	YDL042C	PTC5	Q12511	572 aa		8.11	□□□□□ -1.11
SIR2	YDL042C	INO1	P11986	533 aa		8.1	□□□□□ -1.11
SIR2	YDL042C	NCE103	P53615	221 aa		8.1	□□□□□ -1.11
SIR2	YDL042C	YPL062W	Q02781	134 aa		8.1	□□□□□ -1.11
SIR2	YDL042C	RAD4	P14736	754 aa		8.09	□□□□□ -1.11
SIR2	YDL042C	SBA1	P28707	216 aa	Known RBP	8.09	□□□□□ -1.11
SIR2	YDL042C	MCM7	P38132	845 aa		8.09	□□□□□ -1.11
SIR2	YDL042C	BUD9	P53226	547 aa		8.09	□□□□□ -1.11
SIR2	YDL042C	TDA6	Q06466	467 aa		8.09	□□□□□ -1.11
SIR2	YDL042C	AOS1	Q06624	347 aa		8.09	□□□□□ -1.11
SIR2	YDL042C	BDF2	Q07442	638 aa		8.09	□□□□□ -1.11
SIR2	YDL042C	YFL066C	P43538	392 aa		8.08	□□□□□ -1.12
SIR2	YDL042C	VPS53	P47061	822 aa		8.08	□□□□□ -1.12
SIR2	YDL042C	SHE9	Q04172	456 aa		8.08	□□□□□ -1.12
SIR2	YDL042C	RKM4	Q12504	494 aa		8.08	□□□□□ -1.12
SIR2	YDL042C	SFA1	P32771	386 aa		8.08	□□□□□ -1.12
SIR2	YDL042C	VBA5	P36172	582 aa		8.08	□□□□□ -1.12
SIR2	YDL042C	HUL5	P53119	910 aa		8.08	□□□□□ -1.12
SIR2	YDL042C	YOR131C	Q12486	218 aa		8.08	□□□□□ -1.12
SIR2	YDL042C	PUF4	P25339	888 aa	Known RBP RIP-Chip data	8.07	□□□□□ -1.12	not detected
SIR2	YDL042C	GPT2	P36148	743 aa		8.07	□□□□□ -1.12
SIR2	YDL042C	MCX1	P38323	520 aa	Predicted RBP	8.07	□□□□□ -1.12
SIR2	YDL042C	TIM54	P47045	478 aa		8.07	□□□□□ -1.12
SIR2	YDL042C	RET1	P22276	1149 aa	Known RBP	8.06	□□□□□ -1.12
SIR2	YDL042C	YKL107W	P34251	309 aa		8.06	□□□□□ -1.12
SIR2	YDL042C	MRP8	P35719	219 aa		8.06	□□□□□ -1.12
SIR2	YDL042C	YBR184W	P38299	523 aa		8.06	□□□□□ -1.12
SIR2	YDL042C	RGD1	P38339	666 aa		8.06	□□□□□ -1.12
SIR2	YDL042C	QNS1	P38795	714 aa	Known RBP	8.06	□□□□□ -1.12
SIR2	YDL042C	MPH1	P40562	993 aa		8.06	□□□□□ -1.12
SIR2	YDL042C	NSG2	P53898	299 aa		8.06	□□□□□ -1.12
SIR2	YDL042C	MLS1	P30952	554 aa		8.05	□□□□□ -1.12
SIR2	YDL042C	STE5	P32917	917 aa		8.05	□□□□□ -1.12
SIR2	YDL042C	PIN4	P34217	668 aa	Known RBP RIP-Chip data	8.05	□□□□□ -1.12	not detected
SIR2	YDL042C	NNK1	P36003	928 aa		8.05	□□□□□ -1.12
SIR2	YDL042C	SNF7	P39929	240 aa	Known RBP	8.05	□□□□□ -1.12
SIR2	YDL042C	YGL176C	P46945	554 aa		8.05	□□□□□ -1.12
SIR2	YDL042C	HNT2	P49775	206 aa		8.05	□□□□□ -1.12
SIR2	YDL042C	RPN4	Q03465	531 aa		8.05	□□□□□ -1.12
SIR2	YDL042C	RSA3	Q05942	220 aa	Known RBP	8.05	□□□□□ -1.12
SIR2	YDL042C	SPO75	Q07798	868 aa		8.05	□□□□□ -1.12
SIR2	YDL042C	AI3	P03877	415 aa		8.05	□□□□□ -1.12
SIR2	YDL042C	NFS1	P25374	497 aa		8.05	□□□□□ -1.12
SIR2	YDL042C	RSC6	P25632	483 aa		8.05	□□□□□ -1.12
SIR2	YDL042C	MDJ1	P35191	511 aa		8.05	□□□□□ -1.12
SIR2	YDL042C	IRR1	P40541	1150 aa		8.05	□□□□□ -1.12
SIR2	YDL042C	MSH4	P40965	878 aa	Predicted RBP	8.05	□□□□□ -1.12
SIR2	YDL042C	YPL066W	Q12194	479 aa		8.05	□□□□□ -1.12
SIR2	YDL042C	SMY2	P32909	740 aa	Known RBP	8.04	□□□□□ -1.12
SIR2	YDL042C	PRY1	P47032	299 aa		8.03	□□□□□ -1.12
SIR2	YDL042C	YLR257W	Q06146	321 aa	Known RBP	8.03	□□□□□ -1.12
SIR2	YDL042C	OSW7	P43611	510 aa		8.02	□□□□□ -1.13
SIR2	YDL042C	OSH2	Q12451	1283 aa		8.02	□□□□□ -1.13
SIR2	YDL042C	PBY1	P38254	753 aa		8.02	□□□□□ -1.13
SIR2	YDL042C	YPL260W	Q08977	551 aa		8.02	□□□□□ -1.13
SIR2	YDL042C	GNT1	Q12096	491 aa		8.02	□□□□□ -1.13
SIR2	YDL042C	KIP1	P28742	1111 aa		8.01	□□□□□ -1.13
SIR2	YDL042C	SBP1	P10080	294 aa	Known RBP	8	□□□□□ -1.13
SIR2	YDL042C	PBP2	P38151	413 aa	Known RBP RIP-Chip data	8	□□□□□ -1.13	not detected
SIR2	YDL042C	YHR020W	P38708	688 aa	Known RBP	8	□□□□□ -1.13
SIR2	YDL042C	ARI1	P53111	347 aa	Known RBP	8	□□□□□ -1.13
SIR2	YDL042C	YMR187C	Q03236	431 aa		8	□□□□□ -1.13

Retrieved 100 of 5,963 RNA–protein pairs in 13.2 ms