RNA–Protein interactions for RNA: YDL020C

RPN4, Transcript of Transcription factor that stimulates expression of proteasome genes, yeastyeast

Gene RPN4, Length 1,596 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
RPN4YDL020C RKM2Q03942 479 aa5.63□□□□□ -1.51
RPN4YDL020C SPO20Q04359 397 aa5.63□□□□□ -1.51
RPN4YDL020C FPR4Q06205 392 aaPredicted RBP5.63□□□□□ -1.51
RPN4YDL020C ALG6Q12001 544 aaKnown RBP5.63□□□□□ -1.51
RPN4YDL020C RRM3P38766 723 aa5.62□□□□□ -1.51
RPN4YDL020C TAT2P38967 592 aa5.62□□□□□ -1.51
RPN4YDL020C RAT1Q02792 1006 aaKnown RBP5.62□□□□□ -1.51
RPN4YDL020C NSE3Q05541 303 aa5.62□□□□□ -1.51
RPN4YDL020C AI1P03875 834 aa5.61□□□□□ -1.51
RPN4YDL020C SYP1P25623 870 aaKnown RBP5.61□□□□□ -1.51
RPN4YDL020C BOI2P39969 1040 aa5.61□□□□□ -1.51
RPN4YDL020C KRI1P42846 591 aaKnown RBP5.61□□□□□ -1.51
RPN4YDL020C YNR014WP53719 212 aa5.61□□□□□ -1.51
RPN4YDL020C STI1P15705 589 aaKnown RBP RIP-Chip data5.6□□□□□ -1.51not detected
RPN4YDL020C YAR028WP39548 234 aa5.6□□□□□ -1.51
RPN4YDL020C SBE2P42223 864 aaKnown RBP5.6□□□□□ -1.51
RPN4YDL020C KIP3P53086 805 aaKnown RBP5.6□□□□□ -1.51
RPN4YDL020C NAN1Q02931 896 aaKnown RBP5.6□□□□□ -1.51
RPN4YDL020C TIF35Q04067 274 aaKnown RBP5.6□□□□□ -1.51
RPN4YDL020C YLR225CQ05948 407 aaKnown RBP5.6□□□□□ -1.51
RPN4YDL020C AVO1Q08236 1176 aa5.6□□□□□ -1.51
RPN4YDL020C AGP1P25376 633 aa5.59□□□□□ -1.51
RPN4YDL020C ABD1P32783 436 aaPredicted RBP5.59□□□□□ -1.51
RPN4YDL020C AFG2P32794 780 aa5.59□□□□□ -1.51
RPN4YDL020C YKL091CP33324 310 aaKnown RBP5.59□□□□□ -1.51
RPN4YDL020C MOT2P34909 587 aaKnown RBP5.59□□□□□ -1.51
RPN4YDL020C YGR045CP53229 120 aa5.59□□□□□ -1.51
RPN4YDL020C ESC2Q06340 456 aa5.59□□□□□ -1.51
RPN4YDL020C LAP2Q10740 671 aa5.59□□□□□ -1.51
RPN4YDL020C YOR223WQ12015 292 aa5.59□□□□□ -1.51
RPN4YDL020C CDC53Q12018 815 aaKnown RBP5.59□□□□□ -1.51
RPN4YDL020C INO1P11986 533 aa5.59□□□□□ -1.52
RPN4YDL020C RAD4P14736 754 aa5.59□□□□□ -1.52
RPN4YDL020C DBP5P20449 482 aaKnown RBP5.59□□□□□ -1.52
RPN4YDL020C SEA4P38164 1038 aa5.59□□□□□ -1.52
RPN4YDL020C CNN1P43618 361 aa5.59□□□□□ -1.52
RPN4YDL020C BDF2Q07442 638 aa5.59□□□□□ -1.52
RPN4YDL020C TY1A-NL1Q12391 440 aaKnown RBP5.59□□□□□ -1.52
RPN4YDL020C SBA1P28707 216 aaKnown RBP5.58□□□□□ -1.52
RPN4YDL020C ALG3P38179 458 aa5.58□□□□□ -1.52
RPN4YDL020C HUL5P53119 910 aa5.58□□□□□ -1.52
RPN4YDL020C ELA1P53861 379 aaPredicted RBP5.58□□□□□ -1.52
RPN4YDL020C DOT1Q04089 582 aaKnown RBP5.58□□□□□ -1.52
RPN4YDL020C AOS1Q06624 347 aa5.58□□□□□ -1.52
RPN4YDL020C MCM7P38132 845 aa5.57□□□□□ -1.52
RPN4YDL020C HSE1P38753 452 aa5.57□□□□□ -1.52
RPN4YDL020C TIM54P47045 478 aa5.57□□□□□ -1.52
RPN4YDL020C SHE9Q04172 456 aa5.57□□□□□ -1.52
RPN4YDL020C GAS5Q08193 484 aa5.57□□□□□ -1.52
RPN4YDL020C YOR131CQ12486 218 aa5.57□□□□□ -1.52
RPN4YDL020C PTC5Q12511 572 aa5.57□□□□□ -1.52
RPN4YDL020C STE5P32917 917 aa5.56□□□□□ -1.52
RPN4YDL020C VBA5P36172 582 aa5.56□□□□□ -1.52
RPN4YDL020C YBR184WP38299 523 aa5.56□□□□□ -1.52
RPN4YDL020C LSB3P43603 459 aaKnown RBP5.56□□□□□ -1.52
RPN4YDL020C NCE103P53615 221 aa5.56□□□□□ -1.52
RPN4YDL020C RPN4Q03465 531 aa5.56□□□□□ -1.52
RPN4YDL020C THI72Q08579 599 aa5.56□□□□□ -1.52
RPN4YDL020C RKM4Q12504 494 aa5.56□□□□□ -1.52
RPN4YDL020C PUF4P25339 888 aaKnown RBP RIP-Chip data5.55□□□□□ -1.52not detected
RPN4YDL020C YKL107WP34251 309 aa5.55□□□□□ -1.52
RPN4YDL020C MRP8P35719 219 aa5.55□□□□□ -1.52
RPN4YDL020C ICP55P40051 511 aa5.55□□□□□ -1.52
RPN4YDL020C MPH1P40562 993 aa5.55□□□□□ -1.52
RPN4YDL020C VPS53P47061 822 aa5.55□□□□□ -1.52
RPN4YDL020C BUD9P53226 547 aa5.55□□□□□ -1.52
RPN4YDL020C MLS1P30952 554 aa5.55□□□□□ -1.52
RPN4YDL020C SFA1P32771 386 aa5.55□□□□□ -1.52
RPN4YDL020C RGD1P38339 666 aa5.55□□□□□ -1.52
RPN4YDL020C YFL066CP43538 392 aa5.55□□□□□ -1.52
RPN4YDL020C YGL176CP46945 554 aa5.55□□□□□ -1.52
RPN4YDL020C HNT2P49775 206 aa5.55□□□□□ -1.52
RPN4YDL020C TDA6Q06466 467 aa5.55□□□□□ -1.52
RPN4YDL020C YPL066WQ12194 479 aa5.55□□□□□ -1.52
RPN4YDL020C RET1P22276 1149 aaKnown RBP5.54□□□□□ -1.52
RPN4YDL020C PIN4P34217 668 aaKnown RBP RIP-Chip data5.54□□□□□ -1.52not detected
RPN4YDL020C GPT2P36148 743 aa5.54□□□□□ -1.52
RPN4YDL020C PBP2P38151 413 aaKnown RBP RIP-Chip data5.54□□□□□ -1.52not detected
RPN4YDL020C MCX1P38323 520 aaPredicted RBP5.54□□□□□ -1.52
RPN4YDL020C QNS1P38795 714 aaKnown RBP5.54□□□□□ -1.52
RPN4YDL020C SNF7P39929 240 aaKnown RBP5.54□□□□□ -1.52
RPN4YDL020C IRR1P40541 1150 aa5.54□□□□□ -1.52
RPN4YDL020C RSA3Q05942 220 aaKnown RBP5.54□□□□□ -1.52
RPN4YDL020C SPO75Q07798 868 aa5.54□□□□□ -1.52
RPN4YDL020C CIT2P08679 460 aa5.53□□□□□ -1.52
RPN4YDL020C NFS1P25374 497 aa5.53□□□□□ -1.52
RPN4YDL020C MSH4P40965 878 aaPredicted RBP5.53□□□□□ -1.52
RPN4YDL020C BUD6P41697 788 aa5.53□□□□□ -1.52
RPN4YDL020C OSW7P43611 510 aa5.53□□□□□ -1.52
RPN4YDL020C AI3P03877 415 aa5.52□□□□□ -1.53
RPN4YDL020C RSC6P25632 483 aa5.52□□□□□ -1.53
RPN4YDL020C SMY2P32909 740 aaKnown RBP5.52□□□□□ -1.53
RPN4YDL020C NNK1P36003 928 aa5.52□□□□□ -1.53
RPN4YDL020C PBY1P38254 753 aa5.52□□□□□ -1.53
RPN4YDL020C YHR020WP38708 688 aaKnown RBP5.52□□□□□ -1.53
RPN4YDL020C RNH70P53331 553 aa5.52□□□□□ -1.53
RPN4YDL020C NSG2P53898 299 aa5.52□□□□□ -1.53
RPN4YDL020C YLR257WQ06146 321 aaKnown RBP5.52□□□□□ -1.53
RPN4YDL020C PUS1Q12211 544 aaKnown RBP5.52□□□□□ -1.53
RPN4YDL020C OSH2Q12451 1283 aa5.52□□□□□ -1.53
Retrieved 100 of 5,963 RNA–protein pairs in 18.1 ms