RNA–Protein interactions for RNA: ENST00000640209.1

NECAP1-225, Transcript of NECAP endocytosis associated 1, humanhuman

TSL 5

Gene NECAP1, Length 2,473 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NECAP1-225ENST00000640209 SLIT1O75093 1534 aa11.75□□□□□ -0.53
NECAP1-225ENST00000640209 MTHFSDQ2M296 383 aaKnown RBP11.75□□□□□ -0.53
NECAP1-225ENST00000640209 GCC1Q96CN9 775 aa11.75□□□□□ -0.53
NECAP1-225ENST00000640209 IL27Q8NEV9 243 aa11.75□□□□□ -0.53
NECAP1-225ENST00000640209 DIP2AQ14689 1571 aa11.74□□□□□ -0.53
NECAP1-225ENST00000640209 NUTM2GQ5VZR2 741 aa11.74□□□□□ -0.53
NECAP1-225ENST00000640209 NGDNQ8NEJ9 315 aaKnown RBP11.74□□□□□ -0.53
NECAP1-225ENST00000640209 BMP2KLQ5H9B9 411 aa11.74□□□□□ -0.53
NECAP1-225ENST00000640209 EYA1Q99502 592 aa11.74□□□□□ -0.53
NECAP1-225ENST00000640209 CEP170BQ9Y4F5 1589 aaPredicted RBP11.74□□□□□ -0.53
NECAP1-225ENST00000640209 INTS3Q68E01 1043 aaKnown RBP11.73□□□□□ -0.53
NECAP1-225ENST00000640209 C16orf71Q8IYS4 520 aaPredicted RBP11.72□□□□□ -0.53
NECAP1-225ENST00000640209 TTC21AQ8NDW8 1320 aa11.72□□□□□ -0.53
NECAP1-225ENST00000640209 ARHGEF10O15013 1369 aa11.72□□□□□ -0.53
NECAP1-225ENST00000640209 PIK3C2AO00443 1686 aa11.72□□□□□ -0.53
NECAP1-225ENST00000640209 KCNA6P17658 529 aa11.72□□□□□ -0.53
NECAP1-225ENST00000640209 G2E3Q7L622 706 aa11.72□□□□□ -0.53
NECAP1-225ENST00000640209 CHMP4BQ9H444 224 aaKnown RBP11.72□□□□□ -0.53
NECAP1-225ENST00000640209 SBNO1A3KN83 1393 aa11.72□□□□□ -0.53
NECAP1-225ENST00000640209 ATP10DQ9P241 1426 aa11.72□□□□□ -0.53
NECAP1-225ENST00000640209 FMN2Q9NZ56 1722 aa11.72□□□□□ -0.53
NECAP1-225ENST00000640209 ADRA2BP18089 450 aa11.71□□□□□ -0.53
NECAP1-225ENST00000640209 FLT4P35916 1363 aa11.71□□□□□ -0.53
NECAP1-225ENST00000640209 MSH6P52701 1360 aa11.71□□□□□ -0.53
NECAP1-225ENST00000640209 KIAA0232Q92628 1395 aa11.71□□□□□ -0.53
NECAP1-225ENST00000640209 GSPT1P15170 499 aaKnown RBP11.71□□□□□ -0.53
NECAP1-225ENST00000640209 AMPHP49418 695 aa11.71□□□□□ -0.53
NECAP1-225ENST00000640209 RBM25P49756 843 aaKnown RBP11.71□□□□□ -0.53
NECAP1-225ENST00000640209 TBC1D9Q6ZT07 1266 aa11.71□□□□□ -0.53
NECAP1-225ENST00000640209 OTUD7AQ8TE49 926 aaPredicted RBP11.71□□□□□ -0.53
NECAP1-225ENST00000640209 KIF2CQ99661 725 aa11.71□□□□□ -0.53
NECAP1-225ENST00000640209 MEIS3Q99687 375 aa11.71□□□□□ -0.53
NECAP1-225ENST00000640209 BRPF3Q9ULD4 1205 aa11.71□□□□□ -0.53
NECAP1-225ENST00000640209 DCTPP1Q9H773 170 aa11.7□□□□□ -0.54
NECAP1-225ENST00000640209 KIF24Q5T7B8 1368 aa11.7□□□□□ -0.54
NECAP1-225ENST00000640209 FER1L4A9Z1Z3 1794 aa11.7□□□□□ -0.54
NECAP1-225ENST00000640209 SLC4A2P04920 1241 aa11.7□□□□□ -0.54
NECAP1-225ENST00000640209 NLRP6P59044 892 aa11.7□□□□□ -0.54
NECAP1-225ENST00000640209 PLEKHM2Q8IWE5 1019 aa11.7□□□□□ -0.54
NECAP1-225ENST00000640209 THEMISQ8N1K5 641 aaPredicted RBP11.7□□□□□ -0.54
NECAP1-225ENST00000640209 IGSF1Q8N6C5 1336 aa11.7□□□□□ -0.54
NECAP1-225ENST00000640209 KDRP35968 1356 aa11.7□□□□□ -0.54
NECAP1-225ENST00000640209 F6X3S4 739 aa11.69□□□□□ -0.54
NECAP1-225ENST00000640209 CEP85Q6P2H3 762 aa11.69□□□□□ -0.54
NECAP1-225ENST00000640209 ANKRD44Q8N8A2 993 aa11.69□□□□□ -0.54
NECAP1-225ENST00000640209 RBM33Q96EV2 1170 aaKnown RBP11.69□□□□□ -0.54
NECAP1-225ENST00000640209 XRN1Q8IZH2 1706 aaKnown RBP11.69□□□□□ -0.54
NECAP1-225ENST00000640209 RTL1A6NKG5 1358 aa11.69□□□□□ -0.54
NECAP1-225ENST00000640209 TSPYL4Q9UJ04 414 aa11.69□□□□□ -0.54
NECAP1-225ENST00000640209 MARF1Q9Y4F3 1742 aaKnown RBP11.69□□□□□ -0.54
NECAP1-225ENST00000640209 SMARCA5O60264 1052 aaPredicted RBP11.68□□□□□ -0.54
NECAP1-225ENST00000640209 CD2BP2O95400 341 aaKnown RBP11.68□□□□□ -0.54
NECAP1-225ENST00000640209 APBB1O00213 710 aa11.68□□□□□ -0.54
NECAP1-225ENST00000640209 RBM42Q9BTD8 480 aaKnown RBP11.68□□□□□ -0.54
NECAP1-225ENST00000640209 HOXC9P31274 260 aa11.67□□□□□ -0.54
NECAP1-225ENST00000640209 RTF1Q92541 710 aaKnown RBP11.67□□□□□ -0.54
NECAP1-225ENST00000640209 LTV1Q96GA3 475 aaPredicted RBP11.67□□□□□ -0.54
NECAP1-225ENST00000640209 NWD1Q149M9 1564 aa11.67□□□□□ -0.54
NECAP1-225ENST00000640209 PTPRCP08575 1304 aa11.67□□□□□ -0.54
NECAP1-225ENST00000640209 HSCBQ8IWL3 235 aa11.67□□□□□ -0.54
NECAP1-225ENST00000640209 NECTIN2Q92692 538 aa11.66□□□□□ -0.54
NECAP1-225ENST00000640209 DDIT3P35638 169 aa11.66□□□□□ -0.54
NECAP1-225ENST00000640209 SLC4A10Q6U841 1118 aa11.66□□□□□ -0.54
NECAP1-225ENST00000640209 USHBP1Q8N6Y0 703 aa11.66□□□□□ -0.54
NECAP1-225ENST00000640209 NCOA3Q9Y6Q9 1424 aa11.66□□□□□ -0.54
NECAP1-225ENST00000640209 TTC22Q5TAA0 569 aa11.65□□□□□ -0.54
NECAP1-225ENST00000640209 SNX21Q969T3 373 aa11.65□□□□□ -0.54
NECAP1-225ENST00000640209 CHMP5Q9NZZ3 219 aa11.65□□□□□ -0.54
NECAP1-225ENST00000640209 RPAP2Q8IXW5 612 aaPredicted RBP11.65□□□□□ -0.54
NECAP1-225ENST00000640209 ABTB2Q8N961 1025 aa11.65□□□□□ -0.54
NECAP1-225ENST00000640209 IL17REQ8NFR9 667 aa11.65□□□□□ -0.54
NECAP1-225ENST00000640209 GAS2L2Q8NHY3 880 aa11.65□□□□□ -0.54
NECAP1-225ENST00000640209 ANKARQ7Z5J8 1434 aa11.64□□□□□ -0.55
NECAP1-225ENST00000640209 CDC45O75419 566 aa11.64□□□□□ -0.55
NECAP1-225ENST00000640209 MCM4P33991 863 aa11.64□□□□□ -0.55
NECAP1-225ENST00000640209 HAP1P54257 671 aaPredicted RBP11.64□□□□□ -0.55
NECAP1-225ENST00000640209 POTEDQ86YR6 584 aa11.64□□□□□ -0.55
NECAP1-225ENST00000640209 GNAT3A8MTJ3 354 aa11.63□□□□□ -0.55
NECAP1-225ENST00000640209 C14orf37Q86TY3 774 aa11.63□□□□□ -0.55
NECAP1-225ENST00000640209 FOXD4L1Q9NU39 408 aa11.63□□□□□ -0.55
NECAP1-225ENST00000640209 LRRC37A3O60309 1634 aa11.63□□□□□ -0.55
NECAP1-225ENST00000640209 SDSP20132 328 aa11.62□□□□□ -0.55
NECAP1-225ENST00000640209 FLIIQ13045 1269 aa11.61□□□□□ -0.55
NECAP1-225ENST00000640209 PHF8Q9UPP1 1060 aa11.61□□□□□ -0.55
NECAP1-225ENST00000640209 HTATSF1O43719 755 aaKnown RBP11.61□□□□□ -0.55
NECAP1-225ENST00000640209 HSP90AB1P08238 724 aaKnown RBP11.61□□□□□ -0.55
NECAP1-225ENST00000640209 MAP3K5Q99683 1374 aa11.6□□□□□ -0.55
NECAP1-225ENST00000640209 CCT4P50991 539 aaKnown RBP11.6□□□□□ -0.55
NECAP1-225ENST00000640209 TSHZ3Q63HK5 1081 aa11.6□□□□□ -0.55
NECAP1-225ENST00000640209 GZF1Q9H116 711 aaPredicted RBP11.6□□□□□ -0.55
NECAP1-225ENST00000640209 EXOC6BQ9Y2D4 811 aa11.6□□□□□ -0.55
NECAP1-225ENST00000640209 USP54Q70EL1 1684 aa11.6□□□□□ -0.55
NECAP1-225ENST00000640209 FAM208AQ9UK61 1670 aaKnown RBP11.59□□□□□ -0.55
NECAP1-225ENST00000640209 PNMA6EA0A0J9YXQ4 647 aa11.59□□□□□ -0.55
NECAP1-225ENST00000640209 FKBP5Q13451 457 aaPredicted RBP11.59□□□□□ -0.55
NECAP1-225ENST00000640209 NBPF6Q5VWK0 638 aa11.59□□□□□ -0.55
NECAP1-225ENST00000640209 NBPF4Q96M43 638 aa11.59□□□□□ -0.55
NECAP1-225ENST00000640209 STK31Q9BXU1 1019 aa11.59□□□□□ -0.55
NECAP1-225ENST00000640209 USP26Q9BXU7 913 aa11.59□□□□□ -0.55
NECAP1-225ENST00000640209 TRHP20396 242 aaPredicted RBP11.59□□□□□ -0.55
Retrieved 100 of 20,778 RNA–protein pairs in 77.9 ms