RNA–Protein interactions for RNA: ENST00000640041.1

TCEA1-213, Transcript of transcription elongation factor A1, human

TSL 5 BASIC

Gene TCEA1, Length 1,171 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
TCEA1-213	ENST00000640041	CC2D1B	Q5T0F9	858 aa	Known RBP	32.72	■■■□□ 2.83
TCEA1-213	ENST00000640041	EYA1	Q99502	592 aa		32.72	■■■□□ 2.83
TCEA1-213	ENST00000640041	NHS	Q6T4R5	1651 aa		32.69	■■■□□ 2.82
TCEA1-213	ENST00000640041	PSD	A5PKW4	1024 aa	Predicted RBP	32.69	■■■□□ 2.82
TCEA1-213	ENST00000640041	PLSCR1	O15162	318 aa		32.69	■■■□□ 2.82
TCEA1-213	ENST00000640041	CNGB1	Q14028	1251 aa	Predicted RBP	32.69	■■■□□ 2.82
TCEA1-213	ENST00000640041	RREB1	Q92766	1687 aa		32.69	■■■□□ 2.82
TCEA1-213	ENST00000640041	NCAPD2	Q15021	1401 aa		32.68	■■■□□ 2.82
TCEA1-213	ENST00000640041	SHANK3	Q9BYB0	1731 aa		32.68	■■■□□ 2.82
TCEA1-213	ENST00000640041	R3HDM1	Q15032	1099 aa	Known RBP	32.64	■■■□□ 2.82
TCEA1-213	ENST00000640041	NUP188	Q5SRE5	1749 aa		32.64	■■■□□ 2.82
TCEA1-213	ENST00000640041	RGPD3	A6NKT7	1758 aa	Predicted RBP	32.63	■■■□□ 2.81
TCEA1-213	ENST00000640041	RGPD4	Q7Z3J3	1758 aa		32.63	■■■□□ 2.81
TCEA1-213	ENST00000640041	NPC1L1	Q9UHC9	1359 aa		32.61	■■■□□ 2.81
TCEA1-213	ENST00000640041	PCDH11X	Q9BZA7	1347 aa		32.61	■■■□□ 2.81
TCEA1-213	ENST00000640041	PCDH11Y	Q9BZA8	1340 aa		32.61	■■■□□ 2.81
TCEA1-213	ENST00000640041	SYTL4	Q96C24	671 aa	Predicted RBP	32.6	■■■□□ 2.81
TCEA1-213	ENST00000640041	IGSF1	Q8N6C5	1336 aa		32.59	■■■□□ 2.81
TCEA1-213	ENST00000640041	PRIM1	P49642	420 aa	Known RBP	32.59	■■■□□ 2.81
TCEA1-213	ENST00000640041	MTHFS	P49914	203 aa		32.59	■■■□□ 2.81
TCEA1-213	ENST00000640041	NBPF14	Q5TI25	921 aa		32.59	■■■□□ 2.81
TCEA1-213	ENST00000640041	PROM2	Q8N271	834 aa		32.59	■■■□□ 2.81
TCEA1-213	ENST00000640041	DOT1L	Q8TEK3	1739 aa		32.58	■■■□□ 2.81
TCEA1-213	ENST00000640041	TXNRD1	Q16881	649 aa		32.57	■■■□□ 2.8
TCEA1-213	ENST00000640041	BTAF1	O14981	1849 aa		32.56	■■■□□ 2.8
TCEA1-213	ENST00000640041	CYP27B1	O15528	508 aa		32.56	■■■□□ 2.8
TCEA1-213	ENST00000640041	SPG7	Q9UQ90	795 aa		32.56	■■■□□ 2.8
TCEA1-213	ENST00000640041	PKD1L3	Q7Z443	1732 aa		32.56	■■■□□ 2.8
TCEA1-213	ENST00000640041	IL13	P35225	146 aa		32.52	■■■□□ 2.8
TCEA1-213	ENST00000640041	BCLAF1	Q9NYF8	920 aa	Known RBP eCLIP	32.51	■■■□□ 2.79	2e-6	■■■■□ 19.8
TCEA1-213	ENST00000640041	AEBP1	Q8IUX7	1158 aa		32.5	■■■□□ 2.79
TCEA1-213	ENST00000640041	ANO8	Q9HCE9	1232 aa	Predicted RBP	32.49	■■■□□ 2.79
TCEA1-213	ENST00000640041	KAT6B	Q8WYB5	2073 aa		32.49	■■■□□ 2.79
TCEA1-213	ENST00000640041	SULT6B1	Q6IMI4	303 aa		32.47	■■■□□ 2.79
TCEA1-213	ENST00000640041	PHKG2	P15735	406 aa		32.44	■■■□□ 2.78
TCEA1-213	ENST00000640041	IFNL2	Q8IZJ0	200 aa		32.44	■■■□□ 2.78
TCEA1-213	ENST00000640041	DIAPH1	O60610	1272 aa	Known RBP	32.43	■■■□□ 2.78
TCEA1-213	ENST00000640041	NKX1-1	Q15270	411 aa	Predicted RBP	32.43	■■■□□ 2.78
TCEA1-213	ENST00000640041	PLEKHG2	Q9H7P9	1386 aa		32.43	■■■□□ 2.78
TCEA1-213	ENST00000640041	PLEKHO1	Q53GL0	409 aa	Predicted RBP	32.42	■■■□□ 2.78
TCEA1-213	ENST00000640041	MPRIP	Q6WCQ1	1025 aa		32.42	■■■□□ 2.78
TCEA1-213	ENST00000640041	TOGARAM1	Q9Y4F4	1720 aa		32.42	■■■□□ 2.78
TCEA1-213	ENST00000640041	LRRC4B	Q9NT99	713 aa		32.41	■■■□□ 2.78
TCEA1-213	ENST00000640041	STK32B	Q9NY57	414 aa		32.4	■■■□□ 2.78
TCEA1-213	ENST00000640041	KDR	P35968	1356 aa		32.4	■■■□□ 2.78
TCEA1-213	ENST00000640041	SRCAP	Q6ZRS2	3230 aa		32.39	■■■□□ 2.78
TCEA1-213	ENST00000640041	HMOX1	P09601	288 aa		32.38	■■■□□ 2.77
TCEA1-213	ENST00000640041	COL3A1	P02461	1466 aa	Predicted RBP	32.37	■■■□□ 2.77
TCEA1-213	ENST00000640041	KCNQ4	P56696	695 aa		32.37	■■■□□ 2.77
TCEA1-213	ENST00000640041	SLC15A2	Q16348	729 aa		32.37	■■■□□ 2.77
TCEA1-213	ENST00000640041	AMOT	Q4VCS5	1084 aa		32.37	■■■□□ 2.77
TCEA1-213	ENST00000640041	SLC27A3	Q5K4L6	730 aa		32.37	■■■□□ 2.77
TCEA1-213	ENST00000640041	ZNF530	Q6P9A1	599 aa	Predicted RBP	32.37	■■■□□ 2.77
TCEA1-213	ENST00000640041	LRP5	O75197	1615 aa		32.35	■■■□□ 2.77
TCEA1-213	ENST00000640041	PAPPA	Q13219	1627 aa		32.35	■■■□□ 2.77
TCEA1-213	ENST00000640041	PPP2R1A	P30153	589 aa		32.34	■■■□□ 2.77
TCEA1-213	ENST00000640041	PIGB	Q92521	554 aa		32.34	■■■□□ 2.77
TCEA1-213	ENST00000640041	ZEB1	P37275	1124 aa	Predicted RBP	32.33	■■■□□ 2.77
TCEA1-213	ENST00000640041	LY75	O60449	1722 aa		32.32	■■■□□ 2.76
TCEA1-213	ENST00000640041	U2SURP	O15042	1029 aa	Known RBP	32.32	■■■□□ 2.76
TCEA1-213	ENST00000640041	TMOD3	Q9NYL9	352 aa		32.32	■■■□□ 2.76
TCEA1-213	ENST00000640041	CCNL1	Q9UK58	526 aa	Predicted RBP	32.32	■■■□□ 2.76
TCEA1-213	ENST00000640041	ITGB4	P16144	1822 aa		32.32	■■■□□ 2.76
TCEA1-213	ENST00000640041	ZNF827	Q17R98	1081 aa		32.31	■■■□□ 2.76
TCEA1-213	ENST00000640041	CFAP53	Q96M91	514 aa		32.31	■■■□□ 2.76
TCEA1-213	ENST00000640041	PDGFD	Q9GZP0	370 aa	Predicted RBP	32.31	■■■□□ 2.76
TCEA1-213	ENST00000640041	PALLD	Q8WX93	1383 aa		32.31	■■■□□ 2.76
TCEA1-213	ENST00000640041	HSP90AB1	P08238	724 aa	Known RBP	32.3	■■■□□ 2.76
TCEA1-213	ENST00000640041	C1orf141	Q5JVX7	400 aa		32.3	■■■□□ 2.76
TCEA1-213	ENST00000640041	DDX10	Q13206	875 aa	Known RBP	32.29	■■■□□ 2.76
TCEA1-213	ENST00000640041	DCAF5	Q96JK2	942 aa		32.29	■■■□□ 2.76
TCEA1-213	ENST00000640041	SMARCC1	Q92922	1105 aa	Predicted RBP	32.26	■■■□□ 2.75
TCEA1-213	ENST00000640041	AKT1S1	Q96B36	256 aa		32.26	■■■□□ 2.75
TCEA1-213	ENST00000640041	CASZ1	Q86V15	1759 aa		32.26	■■■□□ 2.75
TCEA1-213	ENST00000640041	KDM6A	O15550	1401 aa	Predicted RBP	32.26	■■■□□ 2.75
TCEA1-213	ENST00000640041	ERVV-2	B6SEH9	535 aa		32.24	■■■□□ 2.75
TCEA1-213	ENST00000640041	SPON1	Q9HCB6	807 aa		32.23	■■■□□ 2.75
TCEA1-213	ENST00000640041	ASAP1	Q9ULH1	1129 aa		32.22	■■■□□ 2.75
TCEA1-213	ENST00000640041	ZBTB7A	O95365	584 aa		32.21	■■■□□ 2.75
TCEA1-213	ENST00000640041	AKAP4	Q5JQC9	854 aa		32.21	■■■□□ 2.75
TCEA1-213	ENST00000640041	CABP4	P57796	275 aa		32.2	■■■□□ 2.75
TCEA1-213	ENST00000640041	MTHFSD	Q2M296	383 aa	Known RBP	32.2	■■■□□ 2.75
TCEA1-213	ENST00000640041	ATG3	Q9NT62	314 aa		32.19	■■■□□ 2.74
TCEA1-213	ENST00000640041	TFCP2L1	Q9NZI6	479 aa		32.19	■■■□□ 2.74
TCEA1-213	ENST00000640041	NUDC	Q9Y266	331 aa		32.19	■■■□□ 2.74
TCEA1-213	ENST00000640041	C5	P01031	1676 aa		32.15	■■■□□ 2.74
TCEA1-213	ENST00000640041	LOC102724428	A0A0B4J2F2	783 aa		32.15	■■■□□ 2.74
TCEA1-213	ENST00000640041	SIK1	P57059	783 aa		32.15	■■■□□ 2.74
TCEA1-213	ENST00000640041	ATF5	Q9Y2D1	282 aa	Predicted RBP	32.15	■■■□□ 2.74
TCEA1-213	ENST00000640041	U2AF1L5	P0DN76	240 aa	Predicted RBP	32.14	■■■□□ 2.74
TCEA1-213	ENST00000640041	U2AF1	Q01081	240 aa	Known RBP eCLIP	32.14	■■■□□ 2.74	4e-7	■■■■□ 24.2
TCEA1-213	ENST00000640041	PNPLA7	Q6ZV29	1317 aa		32.14	■■■□□ 2.74
TCEA1-213	ENST00000640041	NFATC2IP	Q8NCF5	419 aa		32.13	■■■□□ 2.73
TCEA1-213	ENST00000640041	LGR6	Q9HBX8	967 aa		32.13	■■■□□ 2.73
TCEA1-213	ENST00000640041	PRKAR2B	P31323	418 aa		32.12	■■■□□ 2.73
TCEA1-213	ENST00000640041	RSPH6A	Q9H0K4	717 aa		32.12	■■■□□ 2.73
TCEA1-213	ENST00000640041	MTFR1L	Q9H019	292 aa		32.11	■■■□□ 2.73
TCEA1-213	ENST00000640041	PPP1R1B	Q9UD71	204 aa	Predicted RBP	32.11	■■■□□ 2.73
TCEA1-213	ENST00000640041	TUBGCP6	Q96RT7	1819 aa		32.1	■■■□□ 2.73
TCEA1-213	ENST00000640041	RNMT	O43148	476 aa	Known RBP	32.1	■■■□□ 2.73

Retrieved 100 of 20,778 RNA–protein pairs in 161.6 ms