RNA–Protein interactions for RNA: ENST00000639956.1

SPIN3-232, Transcript of spindlin family member 3, humanhuman

TSL 5

Gene SPIN3, Length 2,998 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPIN3-232ENST00000639956 DDX49Q9Y6V7 483 aaKnown RBP15.42■□□□□ 0.06
SPIN3-232ENST00000639956 TTC21BQ7Z4L5 1316 aa15.42■□□□□ 0.06
SPIN3-232ENST00000639956 DDIT3P35638 169 aa15.42■□□□□ 0.06
SPIN3-232ENST00000639956 BRPF1P55201 1214 aaPredicted RBP15.42■□□□□ 0.06
SPIN3-232ENST00000639956 ABCF1Q8NE71 845 aaKnown RBP eCLIP15.42■□□□□ 0.06
SPIN3-232ENST00000639956 RTF1Q92541 710 aaKnown RBP15.42■□□□□ 0.06
SPIN3-232ENST00000639956 PTCH1Q13635 1447 aa15.42■□□□□ 0.06
SPIN3-232ENST00000639956 MTHFSDQ2M296 383 aaKnown RBP15.42■□□□□ 0.06
SPIN3-232ENST00000639956 RICTORQ6R327 1708 aa15.41■□□□□ 0.06
SPIN3-232ENST00000639956 AK9Q5TCS8 1911 aa15.41■□□□□ 0.06
SPIN3-232ENST00000639956 ANKRD44Q8N8A2 993 aa15.41■□□□□ 0.06
SPIN3-232ENST00000639956 CPSF1Q10570 1443 aaKnown RBP15.4■□□□□ 0.06
SPIN3-232ENST00000639956 DTNBO60941 627 aa15.4■□□□□ 0.06
SPIN3-232ENST00000639956 AMPHP49418 695 aa15.4■□□□□ 0.06
SPIN3-232ENST00000639956 MRE11P49959 708 aa15.4■□□□□ 0.06
SPIN3-232ENST00000639956 NGDNQ8NEJ9 315 aaKnown RBP15.4■□□□□ 0.06
SPIN3-232ENST00000639956 ROBO2Q9HCK4 1378 aa15.4■□□□□ 0.06
SPIN3-232ENST00000639956 MAP3K19Q56UN5 1328 aa15.39■□□□□ 0.06
SPIN3-232ENST00000639956 CHL1O00533 1208 aa15.39■□□□□ 0.05
SPIN3-232ENST00000639956 LTKP29376 864 aa15.39■□□□□ 0.05
SPIN3-232ENST00000639956 USHBP1Q8N6Y0 703 aa15.39■□□□□ 0.05
SPIN3-232ENST00000639956 RILPL2Q969X0 211 aa15.39■□□□□ 0.05
SPIN3-232ENST00000639956 USP26Q9BXU7 913 aa15.39■□□□□ 0.05
SPIN3-232ENST00000639956 ATP7BP35670 1465 aa15.39■□□□□ 0.05
SPIN3-232ENST00000639956 INTS3Q68E01 1043 aaKnown RBP15.39■□□□□ 0.05
SPIN3-232ENST00000639956 KIF20BQ96Q89 1820 aa15.38■□□□□ 0.05
SPIN3-232ENST00000639956 MAP4K4O95819 1239 aaPredicted RBP15.38■□□□□ 0.05
SPIN3-232ENST00000639956 FKBP5Q13451 457 aaPredicted RBP15.38■□□□□ 0.05
SPIN3-232ENST00000639956 TRIM6-TRIM34B2RNG4 842 aa15.38■□□□□ 0.05
SPIN3-232ENST00000639956 CAVIN1Q6NZI2 390 aaKnown RBP15.38■□□□□ 0.05
SPIN3-232ENST00000639956 TRIM44Q96DX7 344 aaPredicted RBP15.38■□□□□ 0.05
SPIN3-232ENST00000639956 BAG4O95429 457 aaKnown RBP15.37■□□□□ 0.05
SPIN3-232ENST00000639956 PIK3R4Q99570 1358 aa15.37■□□□□ 0.05
SPIN3-232ENST00000639956 ERBB4Q15303 1308 aa15.37■□□□□ 0.05
SPIN3-232ENST00000639956 RTL1A6NKG5 1358 aa15.36■□□□□ 0.05
SPIN3-232ENST00000639956 CLTCQ00610 1675 aaKnown RBP15.36■□□□□ 0.05
SPIN3-232ENST00000639956 IL1RAPL2Q9NP60 686 aa15.36■□□□□ 0.05
SPIN3-232ENST00000639956 RBM27Q9P2N5 1060 aaKnown RBP15.36■□□□□ 0.05
SPIN3-232ENST00000639956 GOLGA6L22H0YM25 854 aa15.36■□□□□ 0.05
SPIN3-232ENST00000639956 ANKRD26Q9UPS8 1709 aa15.35■□□□□ 0.05
SPIN3-232ENST00000639956 CDK12Q9NYV4 1490 aaPredicted RBP15.35■□□□□ 0.05
SPIN3-232ENST00000639956 PRPF40AO75400 957 aaKnown RBP15.35■□□□□ 0.05
SPIN3-232ENST00000639956 RPAP2Q8IXW5 612 aaPredicted RBP15.35■□□□□ 0.05
SPIN3-232ENST00000639956 PNMA6EA0A0J9YXQ4 647 aa15.35■□□□□ 0.05
SPIN3-232ENST00000639956 NLRP6P59044 892 aa15.35■□□□□ 0.05
SPIN3-232ENST00000639956 CASC1Q6TDU7 716 aa15.35■□□□□ 0.05
SPIN3-232ENST00000639956 EYA1Q99502 592 aa15.35■□□□□ 0.05
SPIN3-232ENST00000639956 NCOA3Q9Y6Q9 1424 aa15.35■□□□□ 0.05
SPIN3-232ENST00000639956 EIF2S2P20042 333 aaKnown RBP15.34■□□□□ 0.05
SPIN3-232ENST00000639956 NEK4P51957 841 aa15.34■□□□□ 0.05
SPIN3-232ENST00000639956 RABEP1Q15276 862 aa15.34■□□□□ 0.05
SPIN3-232ENST00000639956 LARP6Q9BRS8 491 aaKnown RBP15.34■□□□□ 0.05
SPIN3-232ENST00000639956 CIZ1Q9ULV3 898 aaPredicted RBP15.34■□□□□ 0.05
SPIN3-232ENST00000639956 AATKQ6ZMQ8 1374 aa15.34■□□□□ 0.05
SPIN3-232ENST00000639956 STK31Q9BXU1 1019 aa15.33■□□□□ 0.05
SPIN3-232ENST00000639956 PRKCSHP14314 528 aaPredicted RBP15.33■□□□□ 0.04
SPIN3-232ENST00000639956 UPF3BQ9BZI7 483 aaKnown RBP15.33■□□□□ 0.04
SPIN3-232ENST00000639956 ANO2Q9NQ90 1003 aa15.33■□□□□ 0.04
SPIN3-232ENST00000639956 DLG5Q8TDM6 1919 aa15.33■□□□□ 0.04
SPIN3-232ENST00000639956 ATP10DQ9P241 1426 aa15.33■□□□□ 0.04
SPIN3-232ENST00000639956 ANXA1P04083 346 aa15.33■□□□□ 0.04
SPIN3-232ENST00000639956 HDGFP51858 240 aaKnown RBP15.33■□□□□ 0.04
SPIN3-232ENST00000639956 AMOTL2Q9Y2J4 779 aa15.33■□□□□ 0.04
SPIN3-232ENST00000639956 PDE1AP54750 535 aa15.32■□□□□ 0.04
SPIN3-232ENST00000639956 KNDC1Q76NI1 1749 aa15.32■□□□□ 0.04
SPIN3-232ENST00000639956 RGS12O14924 1447 aa15.32■□□□□ 0.04
SPIN3-232ENST00000639956 NUTM1Q86Y26 1132 aa15.31■□□□□ 0.04
SPIN3-232ENST00000639956 PALD1Q9ULE6 856 aa15.31■□□□□ 0.04
SPIN3-232ENST00000639956 ESPNB1AK53 854 aa15.31■□□□□ 0.04
SPIN3-232ENST00000639956 ST18O60284 1047 aa15.31■□□□□ 0.04
SPIN3-232ENST00000639956 UNC5CLQ8IV45 518 aa15.31■□□□□ 0.04
SPIN3-232ENST00000639956 LRRFIP2Q9Y608 721 aaKnown RBP15.31■□□□□ 0.04
SPIN3-232ENST00000639956 HMMRO75330 724 aa15.3■□□□□ 0.04
SPIN3-232ENST00000639956 NASPP49321 788 aaPredicted RBP15.3■□□□□ 0.04
SPIN3-232ENST00000639956 FLIIQ13045 1269 aa15.3■□□□□ 0.04
SPIN3-232ENST00000639956 PHAXQ9H814 394 aaKnown RBP15.3■□□□□ 0.04
SPIN3-232ENST00000639956 ERC2O15083 957 aa15.3■□□□□ 0.04
SPIN3-232ENST00000639956 GNAI2P04899 355 aa15.3■□□□□ 0.04
SPIN3-232ENST00000639956 CDC42BPGQ6DT37 1551 aa15.29■□□□□ 0.04
SPIN3-232ENST00000639956 GDPD2Q9HCC8 539 aa15.29■□□□□ 0.04
SPIN3-232ENST00000639956 NSFL1CQ9UNZ2 370 aaKnown RBP15.29■□□□□ 0.04
SPIN3-232ENST00000639956 SKOR2Q2VWA4 1001 aaPredicted RBP15.29■□□□□ 0.04
SPIN3-232ENST00000639956 PTPRCP08575 1304 aa15.28■□□□□ 0.04
SPIN3-232ENST00000639956 REC8O95072 547 aa15.28■□□□□ 0.04
SPIN3-232ENST00000639956 MPNDQ8N594 471 aa15.28■□□□□ 0.04
SPIN3-232ENST00000639956 RNF214Q8ND24 703 aa15.28■□□□□ 0.04
SPIN3-232ENST00000639956 TNRQ92752 1358 aa15.28■□□□□ 0.04
SPIN3-232ENST00000639956 HAP1P54257 671 aaPredicted RBP15.27■□□□□ 0.04
SPIN3-232ENST00000639956 DLC1Q96QB1 1528 aa15.27■□□□□ 0.04
SPIN3-232ENST00000639956 LRRCC1Q9C099 1032 aa15.27■□□□□ 0.04
SPIN3-232ENST00000639956 IL25Q9H293 177 aa15.27■□□□□ 0.04
SPIN3-232ENST00000639956 ZDHHC9Q9Y397 364 aa15.27■□□□□ 0.04
SPIN3-232ENST00000639956 ABTB2Q8N961 1025 aa15.27■□□□□ 0.03
SPIN3-232ENST00000639956 LMBRD1Q9NUN5 540 aa15.26■□□□□ 0.03
SPIN3-232ENST00000639956 TMEM2Q9UHN6 1383 aa15.26■□□□□ 0.03
SPIN3-232ENST00000639956 RIMBP3CA6NJZ7 1639 aa15.26■□□□□ 0.03
SPIN3-232ENST00000639956 RIMBP3BA6NNM3 1639 aa15.26■□□□□ 0.03
SPIN3-232ENST00000639956 RIMBP3Q9UFD9 1639 aa15.26■□□□□ 0.03
SPIN3-232ENST00000639956 MX1P20591 662 aa15.26■□□□□ 0.03
SPIN3-232ENST00000639956 CLCN1P35523 988 aa15.26■□□□□ 0.03
Retrieved 100 of 20,778 RNA–protein pairs in 98 ms