RNA–Protein interactions for RNA: ENST00000639848.1

HLA-B-256, Transcript of major histocompatibility complex, class I, B, humanhuman

BASIC

Gene HLA-B, Length 1,089 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-B-256ENST00000639848 EYA1Q99502 592 aa27.51■■□□□ 1.99
HLA-B-256ENST00000639848 PTF1AQ7RTS3 328 aa27.5■■□□□ 1.99
HLA-B-256ENST00000639848 RGPD3A6NKT7 1758 aaPredicted RBP27.49■■□□□ 1.99
HLA-B-256ENST00000639848 RGPD4Q7Z3J3 1758 aa27.49■■□□□ 1.99
HLA-B-256ENST00000639848 PLEKHG2Q9H7P9 1386 aa27.48■■□□□ 1.99
HLA-B-256ENST00000639848 NHSQ6T4R5 1651 aa27.48■■□□□ 1.99
HLA-B-256ENST00000639848 KCNQ2O43526 872 aa27.47■■□□□ 1.99
HLA-B-256ENST00000639848 RREB1Q92766 1687 aa27.46■■□□□ 1.99
HLA-B-256ENST00000639848 IGSF1Q8N6C5 1336 aa27.46■■□□□ 1.99
HLA-B-256ENST00000639848 PCDH11XQ9BZA7 1347 aa27.46■■□□□ 1.99
HLA-B-256ENST00000639848 PCDH11YQ9BZA8 1340 aa27.46■■□□□ 1.99
HLA-B-256ENST00000639848 CC2D1BQ5T0F9 858 aaKnown RBP27.46■■□□□ 1.99
HLA-B-256ENST00000639848 ACSBG1Q96GR2 724 aa27.46■■□□□ 1.99
HLA-B-256ENST00000639848 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP27.44■■□□□ 1.98
HLA-B-256ENST00000639848 SHANK3Q9BYB0 1731 aa27.44■■□□□ 1.98
HLA-B-256ENST00000639848 SPG7Q9UQ90 795 aa27.41■■□□□ 1.98
HLA-B-256ENST00000639848 MTHFSP49914 203 aa27.4■■□□□ 1.98
HLA-B-256ENST00000639848 NBPF14Q5TI25 921 aa27.4■■□□□ 1.98
HLA-B-256ENST00000639848 NUP188Q5SRE5 1749 aa27.39■■□□□ 1.98
HLA-B-256ENST00000639848 PKD1L3Q7Z443 1732 aa27.39■■□□□ 1.98
HLA-B-256ENST00000639848 CYP27B1O15528 508 aa27.38■■□□□ 1.97
HLA-B-256ENST00000639848 PROM2Q8N271 834 aa27.38■■□□□ 1.97
HLA-B-256ENST00000639848 IL13P35225 146 aa27.37■■□□□ 1.97
HLA-B-256ENST00000639848 R3HDM1Q15032 1099 aaKnown RBP27.37■■□□□ 1.97
HLA-B-256ENST00000639848 TXNRD1Q16881 649 aa27.37■■□□□ 1.97
HLA-B-256ENST00000639848 PSDA5PKW4 1024 aaPredicted RBP27.36■■□□□ 1.97
HLA-B-256ENST00000639848 PRIM1P49642 420 aaKnown RBP27.36■■□□□ 1.97
HLA-B-256ENST00000639848 NKX1-1Q15270 411 aaPredicted RBP27.34■■□□□ 1.97
HLA-B-256ENST00000639848 SYTL4Q96C24 671 aaPredicted RBP27.34■■□□□ 1.97
HLA-B-256ENST00000639848 KDRP35968 1356 aa27.34■■□□□ 1.97
HLA-B-256ENST00000639848 DOT1LQ8TEK3 1739 aa27.33■■□□□ 1.97
HLA-B-256ENST00000639848 BTAF1O14981 1849 aa27.33■■□□□ 1.97
HLA-B-256ENST00000639848 ZEB1P37275 1124 aaPredicted RBP27.33■■□□□ 1.97
HLA-B-256ENST00000639848 IFNL2Q8IZJ0 200 aa27.31■■□□□ 1.96
HLA-B-256ENST00000639848 AMOTQ4VCS5 1084 aa27.3■■□□□ 1.96
HLA-B-256ENST00000639848 DIAPH1O60610 1272 aaKnown RBP27.29■■□□□ 1.96
HLA-B-256ENST00000639848 PHKG2P15735 406 aa27.29■■□□□ 1.96
HLA-B-256ENST00000639848 CNGB1Q14028 1251 aaPredicted RBP27.29■■□□□ 1.96
HLA-B-256ENST00000639848 PLEKHO1Q53GL0 409 aaPredicted RBP27.29■■□□□ 1.96
HLA-B-256ENST00000639848 SULT6B1Q6IMI4 303 aa27.29■■□□□ 1.96
HLA-B-256ENST00000639848 SRCAPQ6ZRS2 3230 aa27.28■■□□□ 1.96
HLA-B-256ENST00000639848 SLC27A3Q5K4L6 730 aa27.28■■□□□ 1.96
HLA-B-256ENST00000639848 AEBP1Q8IUX7 1158 aa27.28■■□□□ 1.96
HLA-B-256ENST00000639848 ANO8Q9HCE9 1232 aaPredicted RBP27.27■■□□□ 1.96
HLA-B-256ENST00000639848 COL3A1P02461 1466 aaPredicted RBP27.25■■□□□ 1.95
HLA-B-256ENST00000639848 STK32BQ9NY57 414 aa27.24■■□□□ 1.95
HLA-B-256ENST00000639848 HSP90AB1P08238 724 aaKnown RBP27.23■■□□□ 1.95
HLA-B-256ENST00000639848 CFAP53Q96M91 514 aa27.22■■□□□ 1.95
HLA-B-256ENST00000639848 LRRC4BQ9NT99 713 aa27.22■■□□□ 1.95
HLA-B-256ENST00000639848 LRP5O75197 1615 aa27.21■■□□□ 1.95
HLA-B-256ENST00000639848 PPP2R1AP30153 589 aa27.21■■□□□ 1.95
HLA-B-256ENST00000639848 SLC15A2Q16348 729 aa27.21■■□□□ 1.95
HLA-B-256ENST00000639848 ZNF530Q6P9A1 599 aaPredicted RBP27.21■■□□□ 1.95
HLA-B-256ENST00000639848 MPRIPQ6WCQ1 1025 aa27.21■■□□□ 1.95
HLA-B-256ENST00000639848 TOGARAM1Q9Y4F4 1720 aa27.21■■□□□ 1.95
HLA-B-256ENST00000639848 PAPPAQ13219 1627 aa27.2■■□□□ 1.95
HLA-B-256ENST00000639848 DCAF5Q96JK2 942 aa27.2■■□□□ 1.94
HLA-B-256ENST00000639848 KAT6BQ8WYB5 2073 aa27.2■■□□□ 1.94
HLA-B-256ENST00000639848 SMARCC1Q92922 1105 aaPredicted RBP27.19■■□□□ 1.94
HLA-B-256ENST00000639848 HMGB2P26583 209 aaKnown RBP27.18■■□□□ 1.94
HLA-B-256ENST00000639848 C1orf141Q5JVX7 400 aa27.18■■□□□ 1.94
HLA-B-256ENST00000639848 PIGBQ92521 554 aa27.18■■□□□ 1.94
HLA-B-256ENST00000639848 ERVV-2B6SEH9 535 aa27.17■■□□□ 1.94
HLA-B-256ENST00000639848 HMOX1P09601 288 aa27.17■■□□□ 1.94
HLA-B-256ENST00000639848 TMOD3Q9NYL9 352 aa27.17■■□□□ 1.94
HLA-B-256ENST00000639848 LY75O60449 1722 aa27.16■■□□□ 1.94
HLA-B-256ENST00000639848 CCNL1Q9UK58 526 aaPredicted RBP27.16■■□□□ 1.94
HLA-B-256ENST00000639848 PALLDQ8WX93 1383 aa27.16■■□□□ 1.94
HLA-B-256ENST00000639848 U2SURPO15042 1029 aaKnown RBP27.14■■□□□ 1.94
HLA-B-256ENST00000639848 DDX10Q13206 875 aaKnown RBP27.13■■□□□ 1.93
HLA-B-256ENST00000639848 AKT1S1Q96B36 256 aa27.13■■□□□ 1.93
HLA-B-256ENST00000639848 NUDCQ9Y266 331 aa27.13■■□□□ 1.93
HLA-B-256ENST00000639848 KDM6AO15550 1401 aaPredicted RBP27.13■■□□□ 1.93
HLA-B-256ENST00000639848 AKAP4Q5JQC9 854 aa27.12■■□□□ 1.93
HLA-B-256ENST00000639848 ITGB4P16144 1822 aa27.11■■□□□ 1.93
HLA-B-256ENST00000639848 ZNF827Q17R98 1081 aa27.11■■□□□ 1.93
HLA-B-256ENST00000639848 SPON1Q9HCB6 807 aa27.1■■□□□ 1.93
HLA-B-256ENST00000639848 CASZ1Q86V15 1759 aa27.09■■□□□ 1.93
HLA-B-256ENST00000639848 KCNQ4P56696 695 aa27.09■■□□□ 1.93
HLA-B-256ENST00000639848 RALBP1Q15311 655 aa27.08■■□□□ 1.93
HLA-B-256ENST00000639848 CABP4P57796 275 aa27.07■■□□□ 1.92
HLA-B-256ENST00000639848 ASAP1Q9ULH1 1129 aa27.07■■□□□ 1.92
HLA-B-256ENST00000639848 MTHFSDQ2M296 383 aaKnown RBP27.06■■□□□ 1.92
HLA-B-256ENST00000639848 PDGFDQ9GZP0 370 aaPredicted RBP27.06■■□□□ 1.92
HLA-B-256ENST00000639848 ATG3Q9NT62 314 aa27.06■■□□□ 1.92
HLA-B-256ENST00000639848 LOC102724428A0A0B4J2F2 783 aa27.04■■□□□ 1.92
HLA-B-256ENST00000639848 SIK1P57059 783 aa27.04■■□□□ 1.92
HLA-B-256ENST00000639848 RSPH6AQ9H0K4 717 aa27.04■■□□□ 1.92
HLA-B-256ENST00000639848 TFCP2L1Q9NZI6 479 aa27.04■■□□□ 1.92
HLA-B-256ENST00000639848 GAS2L2Q8NHY3 880 aa27.03■■□□□ 1.92
HLA-B-256ENST00000639848 U2AF1L5P0DN76 240 aaPredicted RBP27.02■■□□□ 1.92
HLA-B-256ENST00000639848 U2AF1Q01081 240 aaKnown RBP eCLIP27.02■■□□□ 1.92
HLA-B-256ENST00000639848 MTFR1LQ9H019 292 aa27.02■■□□□ 1.92
HLA-B-256ENST00000639848 PNPLA7Q6ZV29 1317 aa27.01■■□□□ 1.91
HLA-B-256ENST00000639848 FCHSD2O94868 740 aa27.01■■□□□ 1.91
HLA-B-256ENST00000639848 SLC16A10Q8TF71 515 aa27.01■■□□□ 1.91
HLA-B-256ENST00000639848 QSER1Q2KHR3 1735 aa27.01■■□□□ 1.91
HLA-B-256ENST00000639848 RNMTO43148 476 aaKnown RBP27■■□□□ 1.91
HLA-B-256ENST00000639848 ZBTB7AO95365 584 aa27■■□□□ 1.91
HLA-B-256ENST00000639848 PRKAR2BP31323 418 aa27■■□□□ 1.91
Retrieved 100 of 20,778 RNA–protein pairs in 12.7 ms