RNA–Protein interactions for RNA: ENST00000639658.1

POLR2B-213, Transcript of RNA polymerase II subunit B, humanhuman

TSL 5 BASIC

Gene POLR2B, Length 3,300 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
POLR2B-213ENST00000639658 ARHGAP30Q7Z6I6 1101 aaPredicted RBP6.82□□□□□ -1.32
POLR2B-213ENST00000639658 INTS4Q96HW7 963 aaKnown RBP6.82□□□□□ -1.32
POLR2B-213ENST00000639658 ZNF518AQ6AHZ1 1483 aa6.82□□□□□ -1.32
POLR2B-213ENST00000639658 DHX16O60231 1041 aaKnown RBP6.82□□□□□ -1.32
POLR2B-213ENST00000639658 CD2BP2O95400 341 aaKnown RBP6.82□□□□□ -1.32
POLR2B-213ENST00000639658 BRD1O95696 1058 aa6.82□□□□□ -1.32
POLR2B-213ENST00000639658 CUL4AQ13619 759 aa6.82□□□□□ -1.32
POLR2B-213ENST00000639658 TXLNBQ8N3L3 684 aa6.82□□□□□ -1.32
POLR2B-213ENST00000639658 COG6Q9Y2V7 657 aa6.82□□□□□ -1.32
POLR2B-213ENST00000639658 AK9Q5TCS8 1911 aa6.82□□□□□ -1.32
POLR2B-213ENST00000639658 IL16Q14005 1332 aa6.82□□□□□ -1.32
POLR2B-213ENST00000639658 FANCAO15360 1455 aa6.81□□□□□ -1.32
POLR2B-213ENST00000639658 H2AFXP16104 143 aaPredicted RBP6.81□□□□□ -1.32
POLR2B-213ENST00000639658 BANK1Q8NDB2 785 aa6.81□□□□□ -1.32
POLR2B-213ENST00000639658 DDX19BQ9UMR2 479 aa6.81□□□□□ -1.32
POLR2B-213ENST00000639658 TRIM6-TRIM34B2RNG4 842 aa6.81□□□□□ -1.32
POLR2B-213ENST00000639658 KDM4AO75164 1064 aa6.81□□□□□ -1.32
POLR2B-213ENST00000639658 RLBP1P12271 317 aa6.81□□□□□ -1.32
POLR2B-213ENST00000639658 MAP2K1Q02750 393 aaPredicted RBP6.81□□□□□ -1.32
POLR2B-213ENST00000639658 GCC1Q96CN9 775 aa6.81□□□□□ -1.32
POLR2B-213ENST00000639658 TRIM34Q9BYJ4 488 aa6.81□□□□□ -1.32
POLR2B-213ENST00000639658 RASSF4Q9H2L5 321 aa6.81□□□□□ -1.32
POLR2B-213ENST00000639658 CDC42BPBQ9Y5S2 1711 aa6.81□□□□□ -1.32
POLR2B-213ENST00000639658 SETBP1Q9Y6X0 1596 aa6.81□□□□□ -1.32
POLR2B-213ENST00000639658 CHD2O14647 1828 aaKnown RBP6.81□□□□□ -1.32
POLR2B-213ENST00000639658 PTCH1Q13635 1447 aa6.81□□□□□ -1.32
POLR2B-213ENST00000639658 MCM2P49736 904 aa6.81□□□□□ -1.32
POLR2B-213ENST00000639658 PKD2Q13563 968 aa6.81□□□□□ -1.32
POLR2B-213ENST00000639658 C11orf91Q3C1V1 193 aa6.81□□□□□ -1.32
POLR2B-213ENST00000639658 PANK1Q8TE04 598 aa6.81□□□□□ -1.32
POLR2B-213ENST00000639658 KCNF1Q9H3M0 494 aa6.81□□□□□ -1.32
POLR2B-213ENST00000639658 RPAP1Q9BWH6 1393 aaPredicted RBP6.81□□□□□ -1.32
POLR2B-213ENST00000639658 PLEKHG2Q9H7P9 1386 aa6.81□□□□□ -1.32
POLR2B-213ENST00000639658 ELP1O95163 1332 aa6.8□□□□□ -1.32
POLR2B-213ENST00000639658 PTPRCP08575 1304 aa6.8□□□□□ -1.32
POLR2B-213ENST00000639658 CDC25BP30305 580 aa6.8□□□□□ -1.32
POLR2B-213ENST00000639658 CASQ1P31415 396 aa6.8□□□□□ -1.32
POLR2B-213ENST00000639658 ZBTB40Q9NUA8 1239 aa6.8□□□□□ -1.32
POLR2B-213ENST00000639658 FANCD2Q9BXW9 1451 aa6.8□□□□□ -1.32
POLR2B-213ENST00000639658 HECW2Q9P2P5 1572 aa6.8□□□□□ -1.32
POLR2B-213ENST00000639658 SPDYE4A6NLX3 237 aa6.8□□□□□ -1.32
POLR2B-213ENST00000639658 MAFGO15525 162 aa6.8□□□□□ -1.32
POLR2B-213ENST00000639658 NFATC2IPQ8NCF5 419 aa6.8□□□□□ -1.32
POLR2B-213ENST00000639658 SSH2Q76I76 1423 aa6.8□□□□□ -1.32
POLR2B-213ENST00000639658 TRAPPC8Q9Y2L5 1435 aa6.8□□□□□ -1.32
POLR2B-213ENST00000639658 TRPM2O94759 1503 aa6.8□□□□□ -1.32
POLR2B-213ENST00000639658 RBM6P78332 1123 aaKnown RBP6.79□□□□□ -1.32
POLR2B-213ENST00000639658 MCTP1Q6DN14 999 aa6.79□□□□□ -1.32
POLR2B-213ENST00000639658 MKL1Q969V6 931 aa6.79□□□□□ -1.32
POLR2B-213ENST00000639658 ZNF428Q96B54 188 aa6.79□□□□□ -1.32
POLR2B-213ENST00000639658 ERO1AQ96HE7 468 aa6.79□□□□□ -1.32
POLR2B-213ENST00000639658 GOLGA6L6A8MZA4 724 aa6.79□□□□□ -1.32
POLR2B-213ENST00000639658 PATL2C9JE40 543 aaKnown RBP6.79□□□□□ -1.32
POLR2B-213ENST00000639658 HNRNPH2P55795 449 aaKnown RBP6.79□□□□□ -1.32
POLR2B-213ENST00000639658 CT47A1Q5JQC4 288 aaPredicted RBP6.79□□□□□ -1.32
POLR2B-213ENST00000639658 SH3BP1Q9Y3L3 701 aa6.79□□□□□ -1.32
POLR2B-213ENST00000639658 KNSTRNQ9Y448 316 aa6.79□□□□□ -1.32
POLR2B-213ENST00000639658 ERBB3P21860 1342 aa6.79□□□□□ -1.32
POLR2B-213ENST00000639658 KCNJ6P48051 423 aa6.79□□□□□ -1.32
POLR2B-213ENST00000639658 ZNF446Q9NWS9 450 aa6.79□□□□□ -1.32
POLR2B-213ENST00000639658 N4BP2Q86UW6 1770 aaPredicted RBP6.79□□□□□ -1.32
POLR2B-213ENST00000639658 PREX2Q70Z35 1606 aa6.78□□□□□ -1.32
POLR2B-213ENST00000639658 LOC102724159A0A0B4J2E5 919 aa6.78□□□□□ -1.32
POLR2B-213ENST00000639658 SYCE3A1L190 88 aa6.78□□□□□ -1.32
POLR2B-213ENST00000639658 ZRANB2O95218 330 aaKnown RBP eCLIP6.78□□□□□ -1.32
POLR2B-213ENST00000639658 BMS1Q14692 1282 aaKnown RBP6.78□□□□□ -1.32
POLR2B-213ENST00000639658 PWP2Q15269 919 aaKnown RBP6.78□□□□□ -1.32
POLR2B-213ENST00000639658 TSGA10IPQ3SY00 556 aa6.78□□□□□ -1.32
POLR2B-213ENST00000639658 CCDC183Q5T5S1 534 aa6.78□□□□□ -1.32
POLR2B-213ENST00000639658 ZKSCAN2Q63HK3 967 aa6.78□□□□□ -1.32
POLR2B-213ENST00000639658 CC2D2BQ6DHV5 1058 aa6.78□□□□□ -1.32
POLR2B-213ENST00000639658 UTP14AQ9BVJ6 771 aaKnown RBP6.78□□□□□ -1.32
POLR2B-213ENST00000639658 L2HGDHQ9H9P8 463 aa6.78□□□□□ -1.32
POLR2B-213ENST00000639658 ADGRB1O14514 1584 aa6.78□□□□□ -1.32
POLR2B-213ENST00000639658 SETD1AO15047 1707 aaKnown RBP6.78□□□□□ -1.32
POLR2B-213ENST00000639658 KNDC1Q76NI1 1749 aa6.78□□□□□ -1.32
POLR2B-213ENST00000639658 DEPDC5O75140 1603 aa6.78□□□□□ -1.32
POLR2B-213ENST00000639658 KIF2AO00139 706 aaPredicted RBP6.78□□□□□ -1.32
POLR2B-213ENST00000639658 GTF2A1P52655 376 aaPredicted RBP6.78□□□□□ -1.32
POLR2B-213ENST00000639658 KMT5BQ4FZB7 885 aa6.78□□□□□ -1.32
POLR2B-213ENST00000639658 FAM43BQ6ZT52 329 aaPredicted RBP6.78□□□□□ -1.32
POLR2B-213ENST00000639658 NYAP1Q6ZVC0 841 aa6.78□□□□□ -1.32
POLR2B-213ENST00000639658 CEP89Q96ST8 783 aa6.78□□□□□ -1.32
POLR2B-213ENST00000639658 POLKQ9UBT6 870 aa6.78□□□□□ -1.32
POLR2B-213ENST00000639658 CHIC2Q9UKJ5 165 aa6.78□□□□□ -1.32
POLR2B-213ENST00000639658 NRXN1Q9ULB1 1477 aa6.78□□□□□ -1.32
POLR2B-213ENST00000639658 RAD54L2Q9Y4B4 1467 aa6.78□□□□□ -1.32
POLR2B-213ENST00000639658 CCDC171Q6TFL3 1326 aa6.78□□□□□ -1.32
POLR2B-213ENST00000639658 CRYBG1Q9Y4K1 1723 aa6.78□□□□□ -1.32
POLR2B-213ENST00000639658 GLI2P10070 1586 aa6.78□□□□□ -1.32
POLR2B-213ENST00000639658 NEMFO60524 1076 aa6.78□□□□□ -1.32
POLR2B-213ENST00000639658 ADCY5O95622 1261 aa6.78□□□□□ -1.32
POLR2B-213ENST00000639658 CALRP27797 417 aaKnown RBP6.78□□□□□ -1.32
POLR2B-213ENST00000639658 CHD1LQ86WJ1 897 aa6.78□□□□□ -1.32
POLR2B-213ENST00000639658 DZIP1LQ8IYY4 767 aaKnown RBP6.78□□□□□ -1.32
POLR2B-213ENST00000639658 OTUD6BQ8N6M0 293 aa6.78□□□□□ -1.32
POLR2B-213ENST00000639658 FAM210AQ96ND0 272 aa6.78□□□□□ -1.32
POLR2B-213ENST00000639658 CCDC189A1A4V9 331 aa6.77□□□□□ -1.33
POLR2B-213ENST00000639658 CDC45O75419 566 aa6.77□□□□□ -1.33
POLR2B-213ENST00000639658 TMED8Q6PL24 325 aaPredicted RBP6.77□□□□□ -1.33
Retrieved 100 of 20,778 RNA–protein pairs in 22.5 ms