RNA–Protein interactions for RNA: ENST00000639534.1

CHD1L-211, Transcript of chromodomain helicase DNA binding protein 1 like, humanhuman

TSL 5 BASIC

Gene CHD1L, Length 1,144 nt, Biotype protein coding, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD1L-211ENST00000639534 DCTN1Q14203 1278 aa18.48■□□□□ 0.55
CHD1L-211ENST00000639534 MAP3K5Q99683 1374 aa18.47■□□□□ 0.55
CHD1L-211ENST00000639534 GNAT3A8MTJ3 354 aa18.47■□□□□ 0.55
CHD1L-211ENST00000639534 ARHGEF25Q86VW2 580 aa18.47■□□□□ 0.55
CHD1L-211ENST00000639534 TNNQ9UQP3 1299 aa18.47■□□□□ 0.55
CHD1L-211ENST00000639534 NPHP3Q7Z494 1330 aa18.47■□□□□ 0.55
CHD1L-211ENST00000639534 MCM10Q7L590 875 aa18.46■□□□□ 0.55
CHD1L-211ENST00000639534 ITPRIPQ8IWB1 547 aa18.46■□□□□ 0.55
CHD1L-211ENST00000639534 C8orf58Q8NAV2 365 aa18.46■□□□□ 0.55
CHD1L-211ENST00000639534 ABCC6O95255 1503 aa18.45■□□□□ 0.54
CHD1L-211ENST00000639534 PDE4AP27815 886 aa18.45■□□□□ 0.54
CHD1L-211ENST00000639534 TSPYL6Q8N831 410 aa18.45■□□□□ 0.54
CHD1L-211ENST00000639534 NCAPD2Q15021 1401 aa18.45■□□□□ 0.54
CHD1L-211ENST00000639534 IGHDP01880 384 aa18.44■□□□□ 0.54
CHD1L-211ENST00000639534 HSPA2P54652 639 aa18.44■□□□□ 0.54
CHD1L-211ENST00000639534 LTV1Q96GA3 475 aaPredicted RBP18.44■□□□□ 0.54
CHD1L-211ENST00000639534 BACH2Q9BYV9 841 aa18.44■□□□□ 0.54
CHD1L-211ENST00000639534 TMEM57Q8N5G2 664 aa18.43■□□□□ 0.54
CHD1L-211ENST00000639534 CAMTA1Q9Y6Y1 1673 aa18.43■□□□□ 0.54
CHD1L-211ENST00000639534 KDM4FA0A1W2PPD8 638 aa18.42■□□□□ 0.54
CHD1L-211ENST00000639534 HDAC1Q13547 482 aaPredicted RBP18.42■□□□□ 0.54
CHD1L-211ENST00000639534 AMOTQ4VCS5 1084 aa18.42■□□□□ 0.54
CHD1L-211ENST00000639534 LMOD2Q6P5Q4 547 aa18.42■□□□□ 0.54
CHD1L-211ENST00000639534 TSPYL4Q9UJ04 414 aa18.42■□□□□ 0.54
CHD1L-211ENST00000639534 PCDHB15Q9Y5E8 787 aa18.42■□□□□ 0.54
CHD1L-211ENST00000639534 ABCC4O15439 1325 aa18.42■□□□□ 0.54
CHD1L-211ENST00000639534 STRCQ7RTU9 1775 aa18.42■□□□□ 0.54
CHD1L-211ENST00000639534 TNS3Q68CZ2 1445 aa18.41■□□□□ 0.54
CHD1L-211ENST00000639534 ANP32AP39687 249 aaKnown RBP18.41■□□□□ 0.54
CHD1L-211ENST00000639534 XPCQ01831 940 aaPredicted RBP18.41■□□□□ 0.54
CHD1L-211ENST00000639534 CHMP4AQ9BY43 222 aa18.41■□□□□ 0.54
CHD1L-211ENST00000639534 ZBTB40Q9NUA8 1239 aa18.41■□□□□ 0.54
CHD1L-211ENST00000639534 PTPRCP08575 1304 aa18.41■□□□□ 0.54
CHD1L-211ENST00000639534 PLEKHG2Q9H7P9 1386 aa18.41■□□□□ 0.54
CHD1L-211ENST00000639534 PLEKHO1Q53GL0 409 aaPredicted RBP18.4■□□□□ 0.54
CHD1L-211ENST00000639534 NBPF6Q5VWK0 638 aa18.4■□□□□ 0.54
CHD1L-211ENST00000639534 NBPF4Q96M43 638 aa18.4■□□□□ 0.54
CHD1L-211ENST00000639534 MED1Q15648 1581 aaPredicted RBP18.39■□□□□ 0.53
CHD1L-211ENST00000639534 ELL2O00472 640 aaPredicted RBP18.39■□□□□ 0.53
CHD1L-211ENST00000639534 OVOS2A0A0G2JMS6 1433 aa18.39■□□□□ 0.53
CHD1L-211ENST00000639534 ZBTB7CA1YPR0 619 aa18.38■□□□□ 0.53
CHD1L-211ENST00000639534 TAF7Q15545 349 aaPredicted RBP18.38■□□□□ 0.53
CHD1L-211ENST00000639534 FAM161AQ3B820 660 aa18.38■□□□□ 0.53
CHD1L-211ENST00000639534 ANKRD24Q8TF21 1146 aa18.38■□□□□ 0.53
CHD1L-211ENST00000639534 PXDNQ92626 1479 aa18.38■□□□□ 0.53
CHD1L-211ENST00000639534 LMO7Q8WWI1 1683 aa18.38■□□□□ 0.53
CHD1L-211ENST00000639534 XIRP1Q702N8 1843 aaKnown RBP18.37■□□□□ 0.53
CHD1L-211ENST00000639534 AKAP4Q5JQC9 854 aa18.36■□□□□ 0.53
CHD1L-211ENST00000639534 CEMIPQ8WUJ3 1361 aa18.36■□□□□ 0.53
CHD1L-211ENST00000639534 FAM208AQ9UK61 1670 aaKnown RBP18.36■□□□□ 0.53
CHD1L-211ENST00000639534 SPATA31A3Q5VYP0 1347 aa18.35■□□□□ 0.53
CHD1L-211ENST00000639534 USHBP1Q8N6Y0 703 aa18.35■□□□□ 0.53
CHD1L-211ENST00000639534 ZBTB7BO15156 539 aaPredicted RBP18.34■□□□□ 0.53
CHD1L-211ENST00000639534 RGS3P49796 1198 aa18.34■□□□□ 0.53
CHD1L-211ENST00000639534 INTS3Q68E01 1043 aaKnown RBP18.34■□□□□ 0.53
CHD1L-211ENST00000639534 IL17REQ8NFR9 667 aa18.34■□□□□ 0.53
CHD1L-211ENST00000639534 CCDC30Q5VVM6 783 aa18.33■□□□□ 0.52
CHD1L-211ENST00000639534 STK31Q9BXU1 1019 aa18.33■□□□□ 0.52
CHD1L-211ENST00000639534 CPDO75976 1380 aa18.32■□□□□ 0.52
CHD1L-211ENST00000639534 ERBB3P21860 1342 aa18.32■□□□□ 0.52
CHD1L-211ENST00000639534 C1orf141Q5JVX7 400 aa18.32■□□□□ 0.52
CHD1L-211ENST00000639534 ZNF530Q6P9A1 599 aaPredicted RBP18.32■□□□□ 0.52
CHD1L-211ENST00000639534 SMC5Q8IY18 1101 aa18.32■□□□□ 0.52
CHD1L-211ENST00000639534 PDZRN3Q9UPQ7 1066 aa18.32■□□□□ 0.52
CHD1L-211ENST00000639534 CRYBG1Q9Y4K1 1723 aa18.32■□□□□ 0.52
CHD1L-211ENST00000639534 HOXB7P09629 217 aa18.31■□□□□ 0.52
CHD1L-211ENST00000639534 LRRC59Q96AG4 307 aaKnown RBP18.31■□□□□ 0.52
CHD1L-211ENST00000639534 RGPD2P0DJD1 1756 aa18.3■□□□□ 0.52
CHD1L-211ENST00000639534 BRINP3Q76B58 766 aa18.3■□□□□ 0.52
CHD1L-211ENST00000639534 GCC1Q96CN9 775 aa18.3■□□□□ 0.52
CHD1L-211ENST00000639534 SLC4A2P04920 1241 aa18.29■□□□□ 0.52
CHD1L-211ENST00000639534 TEFQ10587 303 aa18.29■□□□□ 0.52
CHD1L-211ENST00000639534 KRT24Q2M2I5 525 aa18.29■□□□□ 0.52
CHD1L-211ENST00000639534 SKAP1Q86WV1 359 aa18.29■□□□□ 0.52
CHD1L-211ENST00000639534 MIS18AQ9NYP9 233 aa18.29■□□□□ 0.52
CHD1L-211ENST00000639534 RGS12O14924 1447 aa18.29■□□□□ 0.52
CHD1L-211ENST00000639534 COL18A1P39060 1754 aa18.29■□□□□ 0.52
CHD1L-211ENST00000639534 CCT4P50991 539 aaKnown RBP18.28■□□□□ 0.52
CHD1L-211ENST00000639534 ZC3H6P61129 1189 aaKnown RBP18.28■□□□□ 0.52
CHD1L-211ENST00000639534 C8orf34Q49A92 452 aa18.28■□□□□ 0.52
CHD1L-211ENST00000639534 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP18.28■□□□□ 0.525e-10■■□□□ 13.4
CHD1L-211ENST00000639534 SLAIN2Q9P270 581 aa18.28■□□□□ 0.52
CHD1L-211ENST00000639534 KDM3BQ7LBC6 1761 aa18.27■□□□□ 0.52
CHD1L-211ENST00000639534 SOS2Q07890 1332 aaPredicted RBP18.27■□□□□ 0.52
CHD1L-211ENST00000639534 RAPGEF4Q8WZA2 1011 aa18.27■□□□□ 0.52
CHD1L-211ENST00000639534 IPO9Q96P70 1041 aaKnown RBP18.27■□□□□ 0.52
CHD1L-211ENST00000639534 AXIN2Q9Y2T1 843 aa18.27■□□□□ 0.52
CHD1L-211ENST00000639534 ZNF335Q9H4Z2 1342 aaPredicted RBP18.26■□□□□ 0.51
CHD1L-211ENST00000639534 VIRMAQ69YN4 1812 aaKnown RBP18.26■□□□□ 0.51
CHD1L-211ENST00000639534 ADAMTS7Q9UKP4 1686 aa18.26■□□□□ 0.51
CHD1L-211ENST00000639534 RNMTO43148 476 aaKnown RBP18.25■□□□□ 0.51
CHD1L-211ENST00000639534 TATP17735 454 aaPredicted RBP18.25■□□□□ 0.51
CHD1L-211ENST00000639534 ERICH6Q7L0X2 663 aa18.25■□□□□ 0.51
CHD1L-211ENST00000639534 DDRGK1Q96HY6 314 aa18.25■□□□□ 0.51
CHD1L-211ENST00000639534 SPG7Q9UQ90 795 aa18.25■□□□□ 0.51
CHD1L-211ENST00000639534 PXDNLA1KZ92 1463 aa18.25■□□□□ 0.51
CHD1L-211ENST00000639534 RPAP2Q8IXW5 612 aaPredicted RBP18.24■□□□□ 0.51
CHD1L-211ENST00000639534 DDX17Q92841 729 aaKnown RBP18.24■□□□□ 0.51
CHD1L-211ENST00000639534 RGPD5Q99666 1765 aa18.24■□□□□ 0.51
CHD1L-211ENST00000639534 CACNA1FO60840 1977 aa18.24■□□□□ 0.51
Retrieved 100 of 20,778 RNA–protein pairs in 27.7 ms