RNA–Protein interactions for RNA: ENST00000638663.1

SCARB2-212, Transcript of scavenger receptor class B member 2, humanhuman

TSL 5

Gene SCARB2, Length 1,922 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCARB2-212ENST00000638663 PDE3AQ14432 1141 aa27.94■■■□□ 2.06
SCARB2-212ENST00000638663 HTATSF1O43719 755 aaKnown RBP27.94■■■□□ 2.06
SCARB2-212ENST00000638663 NCAPD2Q15021 1401 aa27.94■■■□□ 2.06
SCARB2-212ENST00000638663 COL18A1P39060 1754 aa27.93■■■□□ 2.06
SCARB2-212ENST00000638663 TSPYL6Q8N831 410 aa27.93■■■□□ 2.06
SCARB2-212ENST00000638663 MAP3K5Q99683 1374 aa27.93■■■□□ 2.06
SCARB2-212ENST00000638663 CHL1O00533 1208 aa27.92■■■□□ 2.06
SCARB2-212ENST00000638663 CPDO75976 1380 aa27.92■■■□□ 2.06
SCARB2-212ENST00000638663 PANK1Q8TE04 598 aa27.92■■■□□ 2.06
SCARB2-212ENST00000638663 ELL2O00472 640 aaPredicted RBP27.91■■■□□ 2.06
SCARB2-212ENST00000638663 CAMTA1Q9Y6Y1 1673 aa27.91■■■□□ 2.06
SCARB2-212ENST00000638663 VAMP4O75379 141 aa27.9■■■□□ 2.06
SCARB2-212ENST00000638663 C8orf58Q8NAV2 365 aa27.9■■■□□ 2.06
SCARB2-212ENST00000638663 TNNQ9UQP3 1299 aa27.9■■■□□ 2.06
SCARB2-212ENST00000638663 HAP1P54257 671 aaPredicted RBP27.89■■■□□ 2.06
SCARB2-212ENST00000638663 TWISTNBQ3B726 338 aaPredicted RBP27.89■■■□□ 2.06
SCARB2-212ENST00000638663 ALDH1L2Q3SY69 923 aa27.89■■■□□ 2.06
SCARB2-212ENST00000638663 ZNF428Q96B54 188 aa27.88■■■□□ 2.05
SCARB2-212ENST00000638663 NLRP2Q9NX02 1062 aa27.88■■■□□ 2.05
SCARB2-212ENST00000638663 ABCC6O95255 1503 aa27.88■■■□□ 2.05
SCARB2-212ENST00000638663 CSB-PGBD3P0DP91 1061 aa27.87■■■□□ 2.05
SCARB2-212ENST00000638663 PLEKHO1Q53GL0 409 aaPredicted RBP27.87■■■□□ 2.05
SCARB2-212ENST00000638663 ZKSCAN2Q63HK3 967 aa27.87■■■□□ 2.05
SCARB2-212ENST00000638663 IL17REQ8NFR9 667 aa27.87■■■□□ 2.05
SCARB2-212ENST00000638663 MIS18AQ9NYP9 233 aa27.87■■■□□ 2.05
SCARB2-212ENST00000638663 COG6Q9Y2V7 657 aa27.86■■■□□ 2.05
SCARB2-212ENST00000638663 RLBP1P12271 317 aa27.86■■■□□ 2.05
SCARB2-212ENST00000638663 CLUAP1Q96AJ1 413 aa27.86■■■□□ 2.05
SCARB2-212ENST00000638663 LMO7Q8WWI1 1683 aa27.86■■■□□ 2.05
SCARB2-212ENST00000638663 PRDM11Q9NQV5 511 aa27.85■■■□□ 2.05
SCARB2-212ENST00000638663 ROBO1Q9Y6N7 1651 aa27.85■■■□□ 2.05
SCARB2-212ENST00000638663 AMOTQ4VCS5 1084 aa27.84■■■□□ 2.05
SCARB2-212ENST00000638663 ZNF530Q6P9A1 599 aaPredicted RBP27.84■■■□□ 2.05
SCARB2-212ENST00000638663 TSPYL4Q9UJ04 414 aa27.84■■■□□ 2.05
SCARB2-212ENST00000638663 NOB1Q9ULX3 412 aaKnown RBP27.84■■■□□ 2.05
SCARB2-212ENST00000638663 LRRC37A3O60309 1634 aa27.84■■■□□ 2.05
SCARB2-212ENST00000638663 KRT24Q2M2I5 525 aa27.83■■■□□ 2.05
SCARB2-212ENST00000638663 ABCA3Q99758 1704 aa27.83■■■□□ 2.05
SCARB2-212ENST00000638663 KIF16BQ96L93 1317 aa27.82■■■□□ 2.04
SCARB2-212ENST00000638663 TCERG1O14776 1098 aaKnown RBP27.8■■■□□ 2.04
SCARB2-212ENST00000638663 TRIM27P14373 513 aa27.8■■■□□ 2.04
SCARB2-212ENST00000638663 AKAP4Q5JQC9 854 aa27.8■■■□□ 2.04
SCARB2-212ENST00000638663 DZIP1LQ8IYY4 767 aaKnown RBP27.8■■■□□ 2.04
SCARB2-212ENST00000638663 ATF7IPQ6VMQ6 1270 aa27.8■■■□□ 2.04
SCARB2-212ENST00000638663 FTSJ3Q8IY81 847 aaKnown RBP27.8■■■□□ 2.04
SCARB2-212ENST00000638663 BRPF1P55201 1214 aaPredicted RBP27.79■■■□□ 2.04
SCARB2-212ENST00000638663 MRPL50Q8N5N7 158 aaKnown RBP27.79■■■□□ 2.04
SCARB2-212ENST00000638663 RAPGEF4Q8WZA2 1011 aa27.79■■■□□ 2.04
SCARB2-212ENST00000638663 MS4A1P11836 297 aa27.79■■■□□ 2.04
SCARB2-212ENST00000638663 FAM208AQ9UK61 1670 aaKnown RBP27.78■■■□□ 2.04
SCARB2-212ENST00000638663 IPO8O15397 1037 aaKnown RBP27.78■■■□□ 2.04
SCARB2-212ENST00000638663 LGR6Q9HBX8 967 aa27.78■■■□□ 2.04
SCARB2-212ENST00000638663 CEMIPQ8WUJ3 1361 aa27.77■■■□□ 2.04
SCARB2-212ENST00000638663 TAF7Q15545 349 aaPredicted RBP27.77■■■□□ 2.04
SCARB2-212ENST00000638663 C1orf141Q5JVX7 400 aa27.77■■■□□ 2.04
SCARB2-212ENST00000638663 AHDC1Q5TGY3 1603 aaPredicted RBP27.76■■■□□ 2.03
SCARB2-212ENST00000638663 TATP17735 454 aaPredicted RBP27.75■■■□□ 2.03
SCARB2-212ENST00000638663 MPRIPQ6WCQ1 1025 aa27.75■■■□□ 2.03
SCARB2-212ENST00000638663 MVPQ14764 893 aaKnown RBP27.74■■■□□ 2.03
SCARB2-212ENST00000638663 MEGF6O75095 1541 aa27.73■■■□□ 2.03
SCARB2-212ENST00000638663 BABAM1Q9NWV8 329 aa27.73■■■□□ 2.03
SCARB2-212ENST00000638663 WDR17Q8IZU2 1322 aa27.72■■■□□ 2.03
SCARB2-212ENST00000638663 COL5A2P05997 1499 aaPredicted RBP27.71■■■□□ 2.03
SCARB2-212ENST00000638663 RNMTO43148 476 aaKnown RBP27.71■■■□□ 2.03
SCARB2-212ENST00000638663 TOM1L2Q6ZVM7 507 aa27.7■■■□□ 2.02
SCARB2-212ENST00000638663 TEFQ10587 303 aa27.69■■■□□ 2.02
SCARB2-212ENST00000638663 ARHGAP45Q92619 1136 aa27.69■■■□□ 2.02
SCARB2-212ENST00000638663 ITPRIPQ8IWB1 547 aa27.69■■■□□ 2.02
SCARB2-212ENST00000638663 TMEM57Q8N5G2 664 aa27.69■■■□□ 2.02
SCARB2-212ENST00000638663 SPG7Q9UQ90 795 aa27.69■■■□□ 2.02
SCARB2-212ENST00000638663 KDM2BQ8NHM5 1336 aa27.67■■■□□ 2.02
SCARB2-212ENST00000638663 STRN4Q9NRL3 753 aa27.67■■■□□ 2.02
SCARB2-212ENST00000638663 AAMPQ13685 434 aa27.67■■■□□ 2.02
SCARB2-212ENST00000638663 TSHZ2Q9NRE2 1034 aa27.67■■■□□ 2.02
SCARB2-212ENST00000638663 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP27.67■■■□□ 2.02
SCARB2-212ENST00000638663 TOM1O60784 492 aa27.66■■■□□ 2.02
SCARB2-212ENST00000638663 EVA1CP58658 441 aa27.65■■■□□ 2.02
SCARB2-212ENST00000638663 PIP4K2BP78356 416 aa27.65■■■□□ 2.02
SCARB2-212ENST00000638663 OVOS2A0A0G2JMS6 1433 aa27.65■■■□□ 2.02
SCARB2-212ENST00000638663 CENPQQ7L2Z9 268 aaPredicted RBP27.65■■■□□ 2.02
SCARB2-212ENST00000638663 DDX19BQ9UMR2 479 aa27.64■■■□□ 2.02
SCARB2-212ENST00000638663 VIRMAQ69YN4 1812 aaKnown RBP27.64■■■□□ 2.02
SCARB2-212ENST00000638663 PHKG2P15735 406 aa27.63■■■□□ 2.01
SCARB2-212ENST00000638663 LARP1Q6PKG0 1096 aaKnown RBP27.63■■■□□ 2.01
SCARB2-212ENST00000638663 PLEKHG2Q9H7P9 1386 aa27.63■■■□□ 2.01
SCARB2-212ENST00000638663 BTBD11A6QL63 1104 aa27.63■■■□□ 2.01
SCARB2-212ENST00000638663 PHLPP1O60346 1717 aa27.63■■■□□ 2.01
SCARB2-212ENST00000638663 COL22A1Q8NFW1 1626 aaPredicted RBP27.62■■■□□ 2.01
SCARB2-212ENST00000638663 API5Q9BZZ5 524 aaKnown RBP27.62■■■□□ 2.01
SCARB2-212ENST00000638663 IFNL2Q8IZJ0 200 aa27.61■■■□□ 2.01
SCARB2-212ENST00000638663 CARD10Q9BWT7 1032 aa27.61■■■□□ 2.01
SCARB2-212ENST00000638663 SLC4A2P04920 1241 aa27.61■■■□□ 2.01
SCARB2-212ENST00000638663 KDM3BQ7LBC6 1761 aa27.6■■■□□ 2.01
SCARB2-212ENST00000638663 KCNQ3O43525 872 aa27.6■■■□□ 2.01
SCARB2-212ENST00000638663 BTG4Q9NY30 223 aa27.6■■■□□ 2.01
SCARB2-212ENST00000638663 PCDHB15Q9Y5E8 787 aa27.6■■■□□ 2.01
SCARB2-212ENST00000638663 ADAMTS7Q9UKP4 1686 aa27.6■■■□□ 2.01
SCARB2-212ENST00000638663 ABCC4O15439 1325 aa27.6■■■□□ 2.01
SCARB2-212ENST00000638663 PKD1L3Q7Z443 1732 aa27.6■■■□□ 2.01
SCARB2-212ENST00000638663 COL16A1Q07092 1604 aaPredicted RBP27.6■■■□□ 2.01
Retrieved 100 of 20,778 RNA–protein pairs in 224.8 ms