RNA–Protein interactions for RNA: ENST00000638372.1

SCARB2-208, Transcript of scavenger receptor class B member 2, humanhuman

TSL 5

Gene SCARB2, Length 4,811 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCARB2-208ENST00000638372 HOOK1Q9UJC3 728 aaKnown RBP17.14■□□□□ 0.33
SCARB2-208ENST00000638372 SART3Q15020 963 aaKnown RBP17.14■□□□□ 0.33
SCARB2-208ENST00000638372 NSD2O96028 1365 aa17.14■□□□□ 0.33
SCARB2-208ENST00000638372 LARP1BQ659C4 914 aaKnown RBP17.14■□□□□ 0.33
SCARB2-208ENST00000638372 MPHOSPH8Q99549 860 aa17.14■□□□□ 0.33
SCARB2-208ENST00000638372 CARD14Q9BXL6 1004 aa17.14■□□□□ 0.33
SCARB2-208ENST00000638372 BCL11BQ9C0K0 894 aaPredicted RBP17.14■□□□□ 0.33
SCARB2-208ENST00000638372 PCDHB15Q9Y5E8 787 aa17.14■□□□□ 0.33
SCARB2-208ENST00000638372 PCMTD1Q96MG8 357 aaPredicted RBP17.13■□□□□ 0.33
SCARB2-208ENST00000638372 PARD3Q8TEW0 1356 aa17.13■□□□□ 0.33
SCARB2-208ENST00000638372 ANXA1P04083 346 aa17.13■□□□□ 0.33
SCARB2-208ENST00000638372 KINO60870 393 aaKnown RBP17.13■□□□□ 0.33
SCARB2-208ENST00000638372 WDR33Q9C0J8 1336 aaKnown RBP17.12■□□□□ 0.33
SCARB2-208ENST00000638372 TCOF1Q13428 1488 aaKnown RBP17.12■□□□□ 0.33
SCARB2-208ENST00000638372 BOLA2Q9H3K6 86 aa17.12■□□□□ 0.33
SCARB2-208ENST00000638372 SPINK5Q9NQ38 1064 aaPredicted RBP17.12■□□□□ 0.33
SCARB2-208ENST00000638372 PER1O15534 1290 aaPredicted RBP17.12■□□□□ 0.33
SCARB2-208ENST00000638372 TRIM5Q9C035 493 aa17.12■□□□□ 0.33
SCARB2-208ENST00000638372 A2MP01023 1474 aa17.12■□□□□ 0.33
SCARB2-208ENST00000638372 DNAAF4Q8WXU2 420 aa17.12■□□□□ 0.33
SCARB2-208ENST00000638372 DUOX2Q9NRD8 1548 aa17.11■□□□□ 0.33
SCARB2-208ENST00000638372 AEBP1Q8IUX7 1158 aa17.11■□□□□ 0.33
SCARB2-208ENST00000638372 ANO8Q9HCE9 1232 aaPredicted RBP17.11■□□□□ 0.33
SCARB2-208ENST00000638372 TNNQ9UQP3 1299 aa17.11■□□□□ 0.33
SCARB2-208ENST00000638372 ANKRD20A12PQ8NF67 263 aa17.11■□□□□ 0.33
SCARB2-208ENST00000638372 TBC1D2Q9BYX2 928 aa17.11■□□□□ 0.33
SCARB2-208ENST00000638372 ANKRD36BQ8N2N9 1353 aa17.11■□□□□ 0.33
SCARB2-208ENST00000638372 GLRX3O76003 335 aaKnown RBP17.1■□□□□ 0.33
SCARB2-208ENST00000638372 MYD88Q99836 296 aa17.1■□□□□ 0.33
SCARB2-208ENST00000638372 PDRG1Q9NUG6 133 aa17.1■□□□□ 0.33
SCARB2-208ENST00000638372 AMOTQ4VCS5 1084 aa17.1■□□□□ 0.33
SCARB2-208ENST00000638372 LARP1Q6PKG0 1096 aaKnown RBP17.1■□□□□ 0.33
SCARB2-208ENST00000638372 STK38Q15208 465 aa17.1■□□□□ 0.33
SCARB2-208ENST00000638372 TSHZ3Q63HK5 1081 aa17.1■□□□□ 0.33
SCARB2-208ENST00000638372 DDX24Q9GZR7 859 aaKnown RBP eCLIP17.1■□□□□ 0.33
SCARB2-208ENST00000638372 CCDC8Q9H0W5 538 aaPredicted RBP17.1■□□□□ 0.33
SCARB2-208ENST00000638372 CIZ1Q9ULV3 898 aaPredicted RBP17.1■□□□□ 0.33
SCARB2-208ENST00000638372 PPP6R1Q9UPN7 881 aa17.1■□□□□ 0.33
SCARB2-208ENST00000638372 WDR62O43379 1518 aa17.1■□□□□ 0.33
SCARB2-208ENST00000638372 TSPY26PQ9H489 355 aa17.1■□□□□ 0.33
SCARB2-208ENST00000638372 KIAA0556O60303 1618 aa17.09■□□□□ 0.33
SCARB2-208ENST00000638372 CASTP20810 708 aaKnown RBP17.09■□□□□ 0.33
SCARB2-208ENST00000638372 CCDC47Q96A33 483 aaKnown RBP17.09■□□□□ 0.33
SCARB2-208ENST00000638372 TPM2P07951 284 aa17.09■□□□□ 0.33
SCARB2-208ENST00000638372 XBP1P17861 261 aa17.09■□□□□ 0.33
SCARB2-208ENST00000638372 ANKRD1Q15327 319 aa17.09■□□□□ 0.33
SCARB2-208ENST00000638372 IPO7O95373 1038 aaKnown RBP17.09■□□□□ 0.33
SCARB2-208ENST00000638372 FERMT3Q86UX7 667 aa17.09■□□□□ 0.33
SCARB2-208ENST00000638372 DBF4Q9UBU7 674 aaPredicted RBP17.09■□□□□ 0.33
SCARB2-208ENST00000638372 POLKQ9UBT6 870 aa17.08■□□□□ 0.33
SCARB2-208ENST00000638372 CTTNBP2Q8WZ74 1663 aa17.08■□□□□ 0.32
SCARB2-208ENST00000638372 R3HCC1Q9Y3T6 440 aaKnown RBP17.08■□□□□ 0.32
SCARB2-208ENST00000638372 TTC21BQ7Z4L5 1316 aa17.08■□□□□ 0.32
SCARB2-208ENST00000638372 PI4KAP2A4QPH2 592 aa17.08■□□□□ 0.32
SCARB2-208ENST00000638372 IDH1O75874 414 aaKnown RBP17.08■□□□□ 0.32
SCARB2-208ENST00000638372 KRT85P78386 507 aa17.08■□□□□ 0.32
SCARB2-208ENST00000638372 PDZRN4Q6ZMN7 1036 aaPredicted RBP17.08■□□□□ 0.32
SCARB2-208ENST00000638372 PI4KAP1Q8N8J0 262 aa17.08■□□□□ 0.32
SCARB2-208ENST00000638372 ASXL1Q8IXJ9 1541 aa17.08■□□□□ 0.32
SCARB2-208ENST00000638372 PIP4K2BP78356 416 aa17.07■□□□□ 0.32
SCARB2-208ENST00000638372 PRPF40BQ6NWY9 871 aaKnown RBP17.07■□□□□ 0.32
SCARB2-208ENST00000638372 ME1P48163 572 aa17.07■□□□□ 0.32
SCARB2-208ENST00000638372 GRPEL1Q9HAV7 217 aa17.07■□□□□ 0.32
SCARB2-208ENST00000638372 BRMS1Q9HCU9 246 aa17.07■□□□□ 0.32
SCARB2-208ENST00000638372 ADAMTS12P58397 1594 aa17.07■□□□□ 0.32
SCARB2-208ENST00000638372 DDX11Q96FC9 970 aa17.07■□□□□ 0.32
SCARB2-208ENST00000638372 PLEKHH1Q9ULM0 1364 aa17.06■□□□□ 0.32
SCARB2-208ENST00000638372 BICDL1Q6ZP65 573 aa17.06■□□□□ 0.32
SCARB2-208ENST00000638372 KRT28Q7Z3Y7 464 aa17.06■□□□□ 0.32
SCARB2-208ENST00000638372 KLHL34Q8N239 644 aa17.06■□□□□ 0.32
SCARB2-208ENST00000638372 C8orf58Q8NAV2 365 aa17.06■□□□□ 0.32
SCARB2-208ENST00000638372 TBC1D9Q6ZT07 1266 aa17.06■□□□□ 0.32
SCARB2-208ENST00000638372 NAT10Q9H0A0 1025 aaKnown RBP17.06■□□□□ 0.32
SCARB2-208ENST00000638372 NCKAP5LQ9HCH0 1330 aa17.06■□□□□ 0.32
SCARB2-208ENST00000638372 CHRNA2Q15822 529 aa17.06■□□□□ 0.32
SCARB2-208ENST00000638372 MEIS3Q99687 375 aa17.06■□□□□ 0.32
SCARB2-208ENST00000638372 IL16Q14005 1332 aa17.06■□□□□ 0.32
SCARB2-208ENST00000638372 NUP160Q12769 1436 aa17.06■□□□□ 0.32
SCARB2-208ENST00000638372 CEP89Q96ST8 783 aa17.05■□□□□ 0.32
SCARB2-208ENST00000638372 GNL3LQ9NVN8 582 aaKnown RBP17.05■□□□□ 0.32
SCARB2-208ENST00000638372 CCDC39Q9UFE4 941 aa17.05■□□□□ 0.32
SCARB2-208ENST00000638372 TNRQ92752 1358 aa17.05■□□□□ 0.32
SCARB2-208ENST00000638372 RAB11FIP3O75154 756 aa17.05■□□□□ 0.32
SCARB2-208ENST00000638372 SPC24Q8NBT2 197 aa17.05■□□□□ 0.32
SCARB2-208ENST00000638372 LARP6Q9BRS8 491 aaKnown RBP17.05■□□□□ 0.32
SCARB2-208ENST00000638372 PTPRCP08575 1304 aa17.05■□□□□ 0.32
SCARB2-208ENST00000638372 ITSN2Q9NZM3 1697 aa17.05■□□□□ 0.32
SCARB2-208ENST00000638372 RLBP1P12271 317 aa17.05■□□□□ 0.32
SCARB2-208ENST00000638372 GOLGA6L1Q8N7Z2 621 aa17.05■□□□□ 0.32
SCARB2-208ENST00000638372 PZPP20742 1482 aa17.05■□□□□ 0.32
SCARB2-208ENST00000638372 STARD3NLO95772 234 aa17.05■□□□□ 0.32
SCARB2-208ENST00000638372 OLFM4Q6UX06 510 aa17.04■□□□□ 0.32
SCARB2-208ENST00000638372 CCDC83Q8IWF9 413 aa17.04■□□□□ 0.32
SCARB2-208ENST00000638372 A0A087WZG4 1122 aa17.04■□□□□ 0.32
SCARB2-208ENST00000638372 NACAP1Q9BZK3 213 aa17.04■□□□□ 0.32
SCARB2-208ENST00000638372 TCEAL9Q9UHQ7 104 aa17.04■□□□□ 0.32
SCARB2-208ENST00000638372 CTDP1Q9Y5B0 961 aaPredicted RBP17.04■□□□□ 0.32
SCARB2-208ENST00000638372 BMP2KLQ5H9B9 411 aa17.04■□□□□ 0.32
SCARB2-208ENST00000638372 ZNF396Q96N95 335 aaPredicted RBP17.04■□□□□ 0.32
SCARB2-208ENST00000638372 PDILTQ8N807 584 aa17.04■□□□□ 0.32
Retrieved 100 of 20,778 RNA–protein pairs in 141.6 ms