RNA–Protein interactions for RNA: ENST00000636221.1

SMARCA2-248, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily a, member 2, humanhuman

TSL 5

Gene SMARCA2, Length 100 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCA2-248ENST00000636221 BTAF1O14981 1849 aa5.43□□□□□ -1.54
SMARCA2-248ENST00000636221 ONECUT3O60422 494 aaPredicted RBP5.42□□□□□ -1.54
SMARCA2-248ENST00000636221 U2AF1L5P0DN76 240 aaPredicted RBP5.42□□□□□ -1.54
SMARCA2-248ENST00000636221 U2AF1Q01081 240 aaKnown RBP eCLIP5.42□□□□□ -1.54
SMARCA2-248ENST00000636221 DDB1Q16531 1140 aa5.42□□□□□ -1.54
SMARCA2-248ENST00000636221 AEBP1Q8IUX7 1158 aa5.42□□□□□ -1.54
SMARCA2-248ENST00000636221 DDX54Q8TDD1 881 aaKnown RBP5.42□□□□□ -1.54
SMARCA2-248ENST00000636221 CDCA7Q9BWT1 371 aaPredicted RBP5.42□□□□□ -1.54
SMARCA2-248ENST00000636221 COL3A1P02461 1466 aaPredicted RBP5.42□□□□□ -1.54
SMARCA2-248ENST00000636221 MEGF6O75095 1541 aa5.42□□□□□ -1.54
SMARCA2-248ENST00000636221 IGSF1Q8N6C5 1336 aa5.42□□□□□ -1.54
SMARCA2-248ENST00000636221 WDR43Q15061 677 aaKnown RBP eCLIP5.41□□□□□ -1.54
SMARCA2-248ENST00000636221 ZCRB1Q8TBF4 217 aaKnown RBP5.41□□□□□ -1.54
SMARCA2-248ENST00000636221 SPG7Q9UQ90 795 aa5.41□□□□□ -1.54
SMARCA2-248ENST00000636221 DISP2A7MBM2 1401 aa5.4□□□□□ -1.54
SMARCA2-248ENST00000636221 TNS1Q9HBL0 1735 aaKnown RBP5.4□□□□□ -1.54
SMARCA2-248ENST00000636221 TOGARAM1Q9Y4F4 1720 aa5.4□□□□□ -1.54
SMARCA2-248ENST00000636221 NEFMP07197 916 aa5.4□□□□□ -1.54
SMARCA2-248ENST00000636221 CCDC184Q52MB2 194 aa5.4□□□□□ -1.54
SMARCA2-248ENST00000636221 PLEKHO1Q53GL0 409 aaPredicted RBP5.4□□□□□ -1.54
SMARCA2-248ENST00000636221 MRS2Q9HD23 443 aa5.4□□□□□ -1.54
SMARCA2-248ENST00000636221 OVOS2A0A0G2JMS6 1433 aa5.4□□□□□ -1.55
SMARCA2-248ENST00000636221 TNS2Q63HR2 1409 aa5.4□□□□□ -1.55
SMARCA2-248ENST00000636221 EP400Q96L91 3159 aa5.39□□□□□ -1.55
SMARCA2-248ENST00000636221 PRKAR2BP31323 418 aa5.39□□□□□ -1.55
SMARCA2-248ENST00000636221 C1orf141Q5JVX7 400 aa5.39□□□□□ -1.55
SMARCA2-248ENST00000636221 ZNF530Q6P9A1 599 aaPredicted RBP5.39□□□□□ -1.55
SMARCA2-248ENST00000636221 FAM196AQ6ZSG2 479 aa5.39□□□□□ -1.55
SMARCA2-248ENST00000636221 MIER1Q8N108 512 aa5.39□□□□□ -1.55
SMARCA2-248ENST00000636221 MARCH10Q8NA82 808 aaPredicted RBP5.39□□□□□ -1.55
SMARCA2-248ENST00000636221 SYTL4Q96C24 671 aaPredicted RBP5.39□□□□□ -1.55
SMARCA2-248ENST00000636221 ACSBG1Q96GR2 724 aa5.39□□□□□ -1.55
SMARCA2-248ENST00000636221 PNNQ9H307 717 aaKnown RBP5.39□□□□□ -1.55
SMARCA2-248ENST00000636221 NHSQ6T4R5 1651 aa5.39□□□□□ -1.55
SMARCA2-248ENST00000636221 PCDH11XQ9BZA7 1347 aa5.39□□□□□ -1.55
SMARCA2-248ENST00000636221 PCDH11YQ9BZA8 1340 aa5.39□□□□□ -1.55
SMARCA2-248ENST00000636221 SIPA1L3O60292 1781 aaPredicted RBP5.39□□□□□ -1.55
SMARCA2-248ENST00000636221 TAF1LQ8IZX4 1826 aa5.39□□□□□ -1.55
SMARCA2-248ENST00000636221 NCAPD2Q15021 1401 aa5.39□□□□□ -1.55
SMARCA2-248ENST00000636221 SENP3-EIF4A1A0A087X0R7 540 aa5.38□□□□□ -1.55
SMARCA2-248ENST00000636221 CYP27B1O15528 508 aa5.38□□□□□ -1.55
SMARCA2-248ENST00000636221 FCHSD2O94868 740 aa5.38□□□□□ -1.55
SMARCA2-248ENST00000636221 TRIM37O94972 964 aa5.38□□□□□ -1.55
SMARCA2-248ENST00000636221 SF3B2Q13435 895 aaKnown RBP5.38□□□□□ -1.55
SMARCA2-248ENST00000636221 AMOTQ4VCS5 1084 aa5.38□□□□□ -1.55
SMARCA2-248ENST00000636221 CCDC146Q8IYE0 955 aa5.38□□□□□ -1.55
SMARCA2-248ENST00000636221 IFNL2Q8IZJ0 200 aa5.38□□□□□ -1.55
SMARCA2-248ENST00000636221 FAM9BQ8IZU0 186 aa5.38□□□□□ -1.55
SMARCA2-248ENST00000636221 PHACTR3Q96KR7 559 aa5.38□□□□□ -1.55
SMARCA2-248ENST00000636221 RSPH6AQ9H0K4 717 aa5.38□□□□□ -1.55
SMARCA2-248ENST00000636221 MAPK8IP3Q9UPT6 1336 aa5.38□□□□□ -1.55
SMARCA2-248ENST00000636221 KDRP35968 1356 aa5.38□□□□□ -1.55
SMARCA2-248ENST00000636221 NEUROD2Q15784 382 aa5.37□□□□□ -1.55
SMARCA2-248ENST00000636221 MTHFSDQ2M296 383 aaKnown RBP5.37□□□□□ -1.55
SMARCA2-248ENST00000636221 MPRIPQ6WCQ1 1025 aa5.37□□□□□ -1.55
SMARCA2-248ENST00000636221 GAS2L2Q8NHY3 880 aa5.37□□□□□ -1.55
SMARCA2-248ENST00000636221 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP5.37□□□□□ -1.55
SMARCA2-248ENST00000636221 ADAMTS8Q9UP79 889 aa5.37□□□□□ -1.55
SMARCA2-248ENST00000636221 LY75O60449 1722 aa5.37□□□□□ -1.55
SMARCA2-248ENST00000636221 GNAT3A8MTJ3 354 aa5.36□□□□□ -1.55
SMARCA2-248ENST00000636221 KCNQ2O43526 872 aa5.36□□□□□ -1.55
SMARCA2-248ENST00000636221 APBA3O96018 575 aa5.36□□□□□ -1.55
SMARCA2-248ENST00000636221 HSP90AB1P08238 724 aaKnown RBP5.36□□□□□ -1.55
SMARCA2-248ENST00000636221 PHKG2P15735 406 aa5.36□□□□□ -1.55
SMARCA2-248ENST00000636221 PRIM1P49642 420 aaKnown RBP5.36□□□□□ -1.55
SMARCA2-248ENST00000636221 AKAP4Q5JQC9 854 aa5.36□□□□□ -1.55
SMARCA2-248ENST00000636221 PTF1AQ7RTS3 328 aa5.36□□□□□ -1.55
SMARCA2-248ENST00000636221 RTF1Q92541 710 aaKnown RBP5.36□□□□□ -1.55
SMARCA2-248ENST00000636221 UPF1Q92900 1129 aaKnown RBP eCLIP5.36□□□□□ -1.55
SMARCA2-248ENST00000636221 RUNDC1Q96C34 613 aa5.36□□□□□ -1.55
SMARCA2-248ENST00000636221 RRP7AQ9Y3A4 280 aaKnown RBP5.36□□□□□ -1.55
SMARCA2-248ENST00000636221 RGPD3A6NKT7 1758 aaPredicted RBP5.36□□□□□ -1.55
SMARCA2-248ENST00000636221 RGPD4Q7Z3J3 1758 aa5.36□□□□□ -1.55
SMARCA2-248ENST00000636221 CACNA1FO60840 1977 aa5.35□□□□□ -1.55
SMARCA2-248ENST00000636221 TUBGCP6Q96RT7 1819 aa5.35□□□□□ -1.55
SMARCA2-248ENST00000636221 NUP188Q5SRE5 1749 aa5.35□□□□□ -1.55
SMARCA2-248ENST00000636221 C5P01031 1676 aa5.35□□□□□ -1.55
SMARCA2-248ENST00000636221 ADAMTS7Q9UKP4 1686 aa5.35□□□□□ -1.55
SMARCA2-248ENST00000636221 MAP3K5Q99683 1374 aa5.35□□□□□ -1.55
SMARCA2-248ENST00000636221 CCER2I3L3R5 266 aa5.35□□□□□ -1.55
SMARCA2-248ENST00000636221 NFE2L2Q16236 605 aa5.35□□□□□ -1.55
SMARCA2-248ENST00000636221 MCM10Q7L590 875 aa5.35□□□□□ -1.55
SMARCA2-248ENST00000636221 PNISRQ8TF01 805 aaKnown RBP5.35□□□□□ -1.55
SMARCA2-248ENST00000636221 DCAF5Q96JK2 942 aa5.35□□□□□ -1.55
SMARCA2-248ENST00000636221 PLEKHF1Q96S99 279 aa5.35□□□□□ -1.55
SMARCA2-248ENST00000636221 LGR6Q9HBX8 967 aa5.35□□□□□ -1.55
SMARCA2-248ENST00000636221 TMOD3Q9NYL9 352 aa5.35□□□□□ -1.55
SMARCA2-248ENST00000636221 SALL2Q9Y467 1007 aaPredicted RBP5.35□□□□□ -1.55
SMARCA2-248ENST00000636221 MYH14Q7Z406 1995 aaKnown RBP5.35□□□□□ -1.55
SMARCA2-248ENST00000636221 KDM3BQ7LBC6 1761 aa5.34□□□□□ -1.55
SMARCA2-248ENST00000636221 UBR2Q8IWV8 1755 aa5.34□□□□□ -1.55
SMARCA2-248ENST00000636221 RREB1Q92766 1687 aa5.34□□□□□ -1.55
SMARCA2-248ENST00000636221 KDM6AO15550 1401 aaPredicted RBP5.34□□□□□ -1.55
SMARCA2-248ENST00000636221 SOCS7O14512 581 aa5.34□□□□□ -1.55
SMARCA2-248ENST00000636221 APAF1O14727 1248 aa5.34□□□□□ -1.55
SMARCA2-248ENST00000636221 RNMTO43148 476 aaKnown RBP5.34□□□□□ -1.55
SMARCA2-248ENST00000636221 TMPOP42166 694 aaKnown RBP5.34□□□□□ -1.55
SMARCA2-248ENST00000636221 BAG6P46379 1132 aa5.34□□□□□ -1.55
SMARCA2-248ENST00000636221 RIPK4P57078 832 aa5.34□□□□□ -1.55
SMARCA2-248ENST00000636221 CABP4P57796 275 aa5.34□□□□□ -1.55
Retrieved 100 of 20,778 RNA–protein pairs in 184.1 ms