RNA–Protein interactions for RNA: ENST00000636214.1

PNKP-225, Transcript of polynucleotide kinase 3'-phosphatase, humanhuman

TSL 5

Gene PNKP, Length 805 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PNKP-225ENST00000636214 NBPF4Q96M43 638 aa24.73■■□□□ 1.55
PNKP-225ENST00000636214 PPM1GO15355 546 aaPredicted RBP24.72■■□□□ 1.55
PNKP-225ENST00000636214 TATP17735 454 aaPredicted RBP24.72■■□□□ 1.55
PNKP-225ENST00000636214 HSP90AB2PQ58FF8 381 aa24.72■■□□□ 1.55
PNKP-225ENST00000636214 USHBP1Q8N6Y0 703 aa24.72■■□□□ 1.55
PNKP-225ENST00000636214 MEGF6O75095 1541 aa24.71■■□□□ 1.55
PNKP-225ENST00000636214 SLC15A2Q16348 729 aa24.69■■□□□ 1.54
PNKP-225ENST00000636214 EMILIN1Q9Y6C2 1016 aa24.69■■□□□ 1.54
PNKP-225ENST00000636214 DOT1LQ8TEK3 1739 aa24.66■■□□□ 1.54
PNKP-225ENST00000636214 MAP2P11137 1827 aaKnown RBP24.65■■□□□ 1.54
PNKP-225ENST00000636214 CASZ1Q86V15 1759 aa24.65■■□□□ 1.54
PNKP-225ENST00000636214 PRIM1P49642 420 aaKnown RBP24.65■■□□□ 1.54
PNKP-225ENST00000636214 PCDH11XQ9BZA7 1347 aa24.64■■□□□ 1.54
PNKP-225ENST00000636214 PCDH11YQ9BZA8 1340 aa24.64■■□□□ 1.54
PNKP-225ENST00000636214 SHANK3Q9BYB0 1731 aa24.64■■□□□ 1.54
PNKP-225ENST00000636214 ZBTB7AO95365 584 aa24.64■■□□□ 1.54
PNKP-225ENST00000636214 SLC27A3Q5K4L6 730 aa24.64■■□□□ 1.54
PNKP-225ENST00000636214 DCAF8L1A6NGE4 600 aa24.63■■□□□ 1.53
PNKP-225ENST00000636214 ANKRD26Q9UPS8 1709 aa24.62■■□□□ 1.53
PNKP-225ENST00000636214 PANK3Q9H999 370 aa24.62■■□□□ 1.53
PNKP-225ENST00000636214 TNNT2P45379 298 aaPredicted RBP24.61■■□□□ 1.53
PNKP-225ENST00000636214 WASHC2AQ641Q2 1341 aa24.61■■□□□ 1.53
PNKP-225ENST00000636214 ATF5Q9Y2D1 282 aaPredicted RBP24.6■■□□□ 1.53
PNKP-225ENST00000636214 PDGFDQ9GZP0 370 aaPredicted RBP24.59■■□□□ 1.53
PNKP-225ENST00000636214 NSD2O96028 1365 aa24.58■■□□□ 1.53
PNKP-225ENST00000636214 PAPPAQ13219 1627 aa24.58■■□□□ 1.53
PNKP-225ENST00000636214 MTFR1LQ9H019 292 aa24.58■■□□□ 1.53
PNKP-225ENST00000636214 POLKQ9UBT6 870 aa24.58■■□□□ 1.53
PNKP-225ENST00000636214 LRRC4BQ9NT99 713 aa24.57■■□□□ 1.52
PNKP-225ENST00000636214 SPG7Q9UQ90 795 aa24.56■■□□□ 1.52
PNKP-225ENST00000636214 ZNF827Q17R98 1081 aa24.55■■□□□ 1.52
PNKP-225ENST00000636214 CCNL1Q9UK58 526 aaPredicted RBP24.55■■□□□ 1.52
PNKP-225ENST00000636214 KNSTRNQ9Y448 316 aa24.55■■□□□ 1.52
PNKP-225ENST00000636214 HMGB2P26583 209 aaKnown RBP24.54■■□□□ 1.52
PNKP-225ENST00000636214 EYA1Q99502 592 aa24.54■■□□□ 1.52
PNKP-225ENST00000636214 MORC1Q86VD1 984 aa24.53■■□□□ 1.52
PNKP-225ENST00000636214 TFCP2L1Q9NZI6 479 aa24.53■■□□□ 1.52
PNKP-225ENST00000636214 LY75O60449 1722 aa24.52■■□□□ 1.52
PNKP-225ENST00000636214 PKD1L3Q7Z443 1732 aa24.52■■□□□ 1.52
PNKP-225ENST00000636214 NCAPD2Q15021 1401 aa24.52■■□□□ 1.52
PNKP-225ENST00000636214 CYP27B1O15528 508 aa24.51■■□□□ 1.51
PNKP-225ENST00000636214 AKT1S1Q96B36 256 aa24.51■■□□□ 1.51
PNKP-225ENST00000636214 PTGER2P43116 358 aa24.5■■□□□ 1.51
PNKP-225ENST00000636214 KCNQ4P56696 695 aa24.5■■□□□ 1.51
PNKP-225ENST00000636214 EIF4A2Q14240 407 aaKnown RBP24.5■■□□□ 1.51
PNKP-225ENST00000636214 MPRIPQ6WCQ1 1025 aa24.5■■□□□ 1.51
PNKP-225ENST00000636214 QSER1Q2KHR3 1735 aa24.48■■□□□ 1.51
PNKP-225ENST00000636214 SLC16A10Q8TF71 515 aa24.48■■□□□ 1.51
PNKP-225ENST00000636214 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP24.48■■□□□ 1.51
PNKP-225ENST00000636214 SMARCC1Q92922 1105 aaPredicted RBP24.47■■□□□ 1.51
PNKP-225ENST00000636214 PALLDQ8WX93 1383 aa24.46■■□□□ 1.51
PNKP-225ENST00000636214 POLD1P28340 1107 aa24.46■■□□□ 1.51
PNKP-225ENST00000636214 MSH5O43196 834 aa24.45■■□□□ 1.5
PNKP-225ENST00000636214 IFNL2Q8IZJ0 200 aa24.45■■□□□ 1.5
PNKP-225ENST00000636214 ARXQ96QS3 562 aa24.45■■□□□ 1.5
PNKP-225ENST00000636214 ITGB4P16144 1822 aa24.45■■□□□ 1.5
PNKP-225ENST00000636214 KIF7Q2M1P5 1343 aa24.44■■□□□ 1.5
PNKP-225ENST00000636214 PNPLA7Q6ZV29 1317 aa24.44■■□□□ 1.5
PNKP-225ENST00000636214 FHDC1Q9C0D6 1143 aaPredicted RBP24.44■■□□□ 1.5
PNKP-225ENST00000636214 PLEKHG2Q9H7P9 1386 aa24.43■■□□□ 1.5
PNKP-225ENST00000636214 NKX1-1Q15270 411 aaPredicted RBP24.43■■□□□ 1.5
PNKP-225ENST00000636214 TMOD3Q9NYL9 352 aa24.43■■□□□ 1.5
PNKP-225ENST00000636214 TOGARAM1Q9Y4F4 1720 aa24.43■■□□□ 1.5
PNKP-225ENST00000636214 TUBGCP6Q96RT7 1819 aa24.42■■□□□ 1.5
PNKP-225ENST00000636214 IGSF1Q8N6C5 1336 aa24.42■■□□□ 1.5
PNKP-225ENST00000636214 SGIP1Q9BQI5 828 aa24.41■■□□□ 1.5
PNKP-225ENST00000636214 C5P01031 1676 aa24.4■■□□□ 1.5
PNKP-225ENST00000636214 PHKG2P15735 406 aa24.4■■□□□ 1.5
PNKP-225ENST00000636214 KLHL34Q8N239 644 aa24.4■■□□□ 1.5
PNKP-225ENST00000636214 PIGBQ92521 554 aa24.4■■□□□ 1.5
PNKP-225ENST00000636214 SYT17Q9BSW7 474 aa24.4■■□□□ 1.5
PNKP-225ENST00000636214 YY1P25490 414 aa24.39■■□□□ 1.49
PNKP-225ENST00000636214 PLEKHO1Q53GL0 409 aaPredicted RBP24.39■■□□□ 1.49
PNKP-225ENST00000636214 HSP90AB1P08238 724 aaKnown RBP24.38■■□□□ 1.49
PNKP-225ENST00000636214 FLAD1Q8NFF5 587 aa24.38■■□□□ 1.49
PNKP-225ENST00000636214 AK7Q96M32 723 aa24.37■■□□□ 1.49
PNKP-225ENST00000636214 AMOTQ4VCS5 1084 aa24.36■■□□□ 1.49
PNKP-225ENST00000636214 TAF1LQ8IZX4 1826 aa24.35■■□□□ 1.49
PNKP-225ENST00000636214 AMER1Q5JTC6 1135 aaPredicted RBP24.35■■□□□ 1.49
PNKP-225ENST00000636214 ZNF530Q6P9A1 599 aaPredicted RBP24.35■■□□□ 1.49
PNKP-225ENST00000636214 MAP3K5Q99683 1374 aa24.34■■□□□ 1.49
PNKP-225ENST00000636214 C1orf141Q5JVX7 400 aa24.33■■□□□ 1.49
PNKP-225ENST00000636214 COL23A1Q86Y22 540 aaPredicted RBP24.33■■□□□ 1.49
PNKP-225ENST00000636214 LOC102724428A0A0B4J2F2 783 aa24.32■■□□□ 1.48
PNKP-225ENST00000636214 SIK1P57059 783 aa24.32■■□□□ 1.48
PNKP-225ENST00000636214 DCAF5Q96JK2 942 aa24.32■■□□□ 1.48
PNKP-225ENST00000636214 C4BP0C0L5 1744 aa24.32■■□□□ 1.48
PNKP-225ENST00000636214 SULT6B1Q6IMI4 303 aa24.31■■□□□ 1.48
PNKP-225ENST00000636214 ERVV-2B6SEH9 535 aa24.3■■□□□ 1.48
PNKP-225ENST00000636214 CC2D1BQ5T0F9 858 aaKnown RBP24.3■■□□□ 1.48
PNKP-225ENST00000636214 ASAP1Q9ULH1 1129 aa24.3■■□□□ 1.48
PNKP-225ENST00000636214 ATP6V1AP38606 617 aa24.29■■□□□ 1.48
PNKP-225ENST00000636214 MSL1Q68DK7 614 aa24.29■■□□□ 1.48
PNKP-225ENST00000636214 AEBP1Q8IUX7 1158 aa24.29■■□□□ 1.48
PNKP-225ENST00000636214 COL24A1Q17RW2 1714 aa24.29■■□□□ 1.48
PNKP-225ENST00000636214 PHF14O94880 888 aa24.28■■□□□ 1.48
PNKP-225ENST00000636214 CABP4P57796 275 aa24.28■■□□□ 1.48
PNKP-225ENST00000636214 IL13P35225 146 aa24.27■■□□□ 1.48
PNKP-225ENST00000636214 MTHFSP49914 203 aa24.27■■□□□ 1.48
PNKP-225ENST00000636214 GPR162Q16538 588 aa24.26■■□□□ 1.47
Retrieved 100 of 20,778 RNA–protein pairs in 45.4 ms