RNA–Protein interactions for RNA: ENST00000636114.1

CD46-219, Transcript of CD46 molecule, humanhuman

TSL 5

Gene CD46, Length 2,098 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CD46-219ENST00000636114 EML3Q32P44 896 aa4.22□□□□□ -1.73
CD46-219ENST00000636114 OXLD1Q5BKU9 147 aa4.22□□□□□ -1.73
CD46-219ENST00000636114 USP17L2Q6R6M4 530 aa4.22□□□□□ -1.73
CD46-219ENST00000636114 USP17L1Q7RTZ2 530 aa4.22□□□□□ -1.73
CD46-219ENST00000636114 SIRT1Q96EB6 747 aa4.22□□□□□ -1.73
CD46-219ENST00000636114 USP4Q13107 963 aa4.22□□□□□ -1.73
CD46-219ENST00000636114 NCOA4Q13772 614 aa4.22□□□□□ -1.73
CD46-219ENST00000636114 TSGA10IPQ3SY00 556 aa4.22□□□□□ -1.73
CD46-219ENST00000636114 CFAP70Q5T0N1 1121 aa4.22□□□□□ -1.73
CD46-219ENST00000636114 CC2D2BQ6DHV5 1058 aa4.22□□□□□ -1.73
CD46-219ENST00000636114 CRIPAKQ8N1N5 446 aa4.22□□□□□ -1.73
CD46-219ENST00000636114 CDCA7Q9BWT1 371 aaPredicted RBP4.22□□□□□ -1.73
CD46-219ENST00000636114 ESF1Q9H501 851 aaKnown RBP4.22□□□□□ -1.73
CD46-219ENST00000636114 ZFAND3Q9H8U3 227 aa4.22□□□□□ -1.73
CD46-219ENST00000636114 CYLDQ9NQC7 956 aa4.22□□□□□ -1.73
CD46-219ENST00000636114 BTBD11A6QL63 1104 aa4.21□□□□□ -1.74
CD46-219ENST00000636114 CAPN5O15484 640 aaPredicted RBP4.21□□□□□ -1.74
CD46-219ENST00000636114 LILRA1O75019 489 aa4.21□□□□□ -1.74
CD46-219ENST00000636114 LMOD1P29536 600 aaPredicted RBP4.21□□□□□ -1.74
CD46-219ENST00000636114 SCTRP47872 440 aa4.21□□□□□ -1.74
CD46-219ENST00000636114 DEPDC4Q8N2C3 294 aa4.21□□□□□ -1.74
CD46-219ENST00000636114 RSF1Q96T23 1441 aaPredicted RBP4.21□□□□□ -1.74
CD46-219ENST00000636114 SMCPP49901 116 aaPredicted RBP4.2□□□□□ -1.74
CD46-219ENST00000636114 Q6ZVU0 165 aa4.2□□□□□ -1.74
CD46-219ENST00000636114 NOD1Q9Y239 953 aa4.2□□□□□ -1.74
CD46-219ENST00000636114 ATP5J2-PTCD1G3V325 749 aa4.2□□□□□ -1.74
CD46-219ENST00000636114 AXIN1O15169 862 aa4.2□□□□□ -1.74
CD46-219ENST00000636114 CYP2U1Q7Z449 544 aa4.2□□□□□ -1.74
CD46-219ENST00000636114 MEIOBQ8N635 442 aa4.2□□□□□ -1.74
CD46-219ENST00000636114 KRTAP9-2Q9BYQ4 174 aa4.2□□□□□ -1.74
CD46-219ENST00000636114 KRTAP9-6A0A140TA67 174 aa4.19□□□□□ -1.74
CD46-219ENST00000636114 ADH1AP07327 375 aa4.19□□□□□ -1.74
CD46-219ENST00000636114 CBLBQ13191 982 aa4.19□□□□□ -1.74
CD46-219ENST00000636114 TRIM50Q86XT4 487 aa4.19□□□□□ -1.74
CD46-219ENST00000636114 ARID3AQ99856 593 aa4.19□□□□□ -1.74
CD46-219ENST00000636114 OSBPL3Q9H4L5 887 aa4.19□□□□□ -1.74
CD46-219ENST00000636114 MKRN1Q9UHC7 482 aaKnown RBP4.19□□□□□ -1.74
CD46-219ENST00000636114 UPP2O95045 317 aa4.18□□□□□ -1.74
CD46-219ENST00000636114 RFX1P22670 979 aa4.18□□□□□ -1.74
CD46-219ENST00000636114 ADD1P35611 737 aaKnown RBP4.18□□□□□ -1.74
CD46-219ENST00000636114 ATP1A2P50993 1020 aa4.18□□□□□ -1.74
CD46-219ENST00000636114 GTF2IP78347 998 aa4.18□□□□□ -1.74
CD46-219ENST00000636114 TSEN34Q9BSV6 310 aaKnown RBP4.18□□□□□ -1.74
CD46-219ENST00000636114 KRTAP4-8A0A0G2JLE6 195 aa4.18□□□□□ -1.74
CD46-219ENST00000636114 ST8SIA5O15466 376 aa4.18□□□□□ -1.74
CD46-219ENST00000636114 LINC00528Q8N1L1 170 aa4.18□□□□□ -1.74
CD46-219ENST00000636114 PBXIP1Q96AQ6 731 aa4.18□□□□□ -1.74
CD46-219ENST00000636114 VRTNQ9H8Y1 702 aa4.18□□□□□ -1.74
CD46-219ENST00000636114 AAASQ9NRG9 546 aa4.18□□□□□ -1.74
CD46-219ENST00000636114 BAZ1AQ9NRL2 1556 aaPredicted RBP4.17□□□□□ -1.74
CD46-219ENST00000636114 TRBV21OR9-2A0A075B6F4 123 aaPredicted RBP4.17□□□□□ -1.74
CD46-219ENST00000636114 GNRH1P01148 92 aa4.17□□□□□ -1.74
CD46-219ENST00000636114 BMP1P13497 986 aa4.17□□□□□ -1.74
CD46-219ENST00000636114 RELBQ01201 579 aa4.17□□□□□ -1.74
CD46-219ENST00000636114 KANK4Q5T7N3 995 aaPredicted RBP4.17□□□□□ -1.74
CD46-219ENST00000636114 MRPL14Q6P1L8 145 aaKnown RBP4.17□□□□□ -1.74
CD46-219ENST00000636114 PCDHGA11Q9Y5H2 935 aa4.17□□□□□ -1.74
CD46-219ENST00000636114 FAM196BA6NMK8 535 aa4.17□□□□□ -1.74
CD46-219ENST00000636114 PPP1R15AO75807 674 aaPredicted RBP4.17□□□□□ -1.74
CD46-219ENST00000636114 RASA1P20936 1047 aa4.17□□□□□ -1.74
CD46-219ENST00000636114 CLDN10P78369 228 aa4.17□□□□□ -1.74
CD46-219ENST00000636114 PSME1Q06323 249 aa4.17□□□□□ -1.74
CD46-219ENST00000636114 SCARF1Q14162 830 aa4.17□□□□□ -1.74
CD46-219ENST00000636114 LARP1Q6PKG0 1096 aaKnown RBP4.17□□□□□ -1.74
CD46-219ENST00000636114 LARGE2Q8N3Y3 721 aa4.17□□□□□ -1.74
CD46-219ENST00000636114 OGFOD1Q8N543 542 aa4.17□□□□□ -1.74
CD46-219ENST00000636114 KDF1Q8NAX2 398 aaPredicted RBP4.17□□□□□ -1.74
CD46-219ENST00000636114 AGBL1Q96MI9 1066 aa4.17□□□□□ -1.74
CD46-219ENST00000636114 DNAAF2Q9NVR5 837 aaKnown RBP4.17□□□□□ -1.74
CD46-219ENST00000636114 PTGIRP43119 386 aa4.16□□□□□ -1.74
CD46-219ENST00000636114 SRPK2P78362 688 aaKnown RBP4.16□□□□□ -1.74
CD46-219ENST00000636114 ESCO1Q5FWF5 840 aa4.16□□□□□ -1.74
CD46-219ENST00000636114 ARHGEF10LQ9HCE6 1279 aa4.16□□□□□ -1.74
CD46-219ENST00000636114 USP17L15C9J2P7 530 aa4.15□□□□□ -1.74
CD46-219ENST00000636114 USP17L10C9JJH3 530 aa4.15□□□□□ -1.74
CD46-219ENST00000636114 USP17L13C9JLJ4 530 aa4.15□□□□□ -1.74
CD46-219ENST00000636114 USP17L12C9JPN9 530 aa4.15□□□□□ -1.74
CD46-219ENST00000636114 USP17L11C9JVI0 530 aa4.15□□□□□ -1.74
CD46-219ENST00000636114 USP17L21D6R901 530 aa4.15□□□□□ -1.74
CD46-219ENST00000636114 USP17L18D6R9N7 530 aa4.15□□□□□ -1.74
CD46-219ENST00000636114 USP17L22D6RA61 530 aa4.15□□□□□ -1.74
CD46-219ENST00000636114 USP17L17D6RBQ6 530 aa4.15□□□□□ -1.74
CD46-219ENST00000636114 USP17L19D6RCP7 530 aa4.15□□□□□ -1.74
CD46-219ENST00000636114 USP17L20D6RJB6 530 aa4.15□□□□□ -1.74
CD46-219ENST00000636114 WASLO00401 505 aaPredicted RBP4.15□□□□□ -1.74
CD46-219ENST00000636114 SPINT1O43278 529 aa4.15□□□□□ -1.74
CD46-219ENST00000636114 BMP2P12643 396 aa4.15□□□□□ -1.74
CD46-219ENST00000636114 USP17L24Q0WX57 530 aa4.15□□□□□ -1.74
CD46-219ENST00000636114 CLN3Q13286 438 aa4.15□□□□□ -1.74
CD46-219ENST00000636114 CRTC2Q53ET0 693 aaPredicted RBP4.15□□□□□ -1.74
CD46-219ENST00000636114 TRIM46Q7Z4K8 759 aa4.15□□□□□ -1.74
CD46-219ENST00000636114 SIX5Q8N196 739 aa4.15□□□□□ -1.74
CD46-219ENST00000636114 TPCN2Q8NHX9 752 aa4.15□□□□□ -1.74
CD46-219ENST00000636114 ZNF594Q96JF6 807 aaPredicted RBP4.15□□□□□ -1.74
CD46-219ENST00000636114 ATP13A2Q9NQ11 1180 aa4.15□□□□□ -1.74
CD46-219ENST00000636114 RBM19Q9Y4C8 960 aaKnown RBP4.15□□□□□ -1.74
CD46-219ENST00000636114 A0A1W2PRU2 124 aa4.15□□□□□ -1.75
CD46-219ENST00000636114 SCNN1DP51172 638 aa4.15□□□□□ -1.75
CD46-219ENST00000636114 GDF10P55107 478 aa4.15□□□□□ -1.75
CD46-219ENST00000636114 PTK7Q13308 1070 aa4.15□□□□□ -1.75
Retrieved 100 of 20,778 RNA–protein pairs in 35.4 ms