RNA–Protein interactions for RNA: ENST00000635853.1

SPTAN1-228, Transcript of spectrin alpha, non-erythrocytic 1, humanhuman

TSL 5

Gene SPTAN1, Length 5,870 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPTAN1-228ENST00000635853 CCDC158Q5M9N0 1113 aa11.56□□□□□ -0.56
SPTAN1-228ENST00000635853 ZNF622Q969S3 477 aaKnown RBP eCLIP11.56□□□□□ -0.56
SPTAN1-228ENST00000635853 NEMFO60524 1076 aa11.56□□□□□ -0.56
SPTAN1-228ENST00000635853 SOGA3Q5TF21 947 aa11.56□□□□□ -0.56
SPTAN1-228ENST00000635853 CEP135Q66GS9 1140 aa11.56□□□□□ -0.56
SPTAN1-228ENST00000635853 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP11.56□□□□□ -0.56
SPTAN1-228ENST00000635853 DNAAF4Q8WXU2 420 aa11.55□□□□□ -0.56
SPTAN1-228ENST00000635853 U2AF2P26368 475 aaKnown RBP eCLIP11.55□□□□□ -0.561e-7■■■□□ 16.8
SPTAN1-228ENST00000635853 RBM28Q9NW13 759 aaKnown RBP11.55□□□□□ -0.56
SPTAN1-228ENST00000635853 NLRP6P59044 892 aa11.55□□□□□ -0.56
SPTAN1-228ENST00000635853 C16orf45Q96MC5 204 aaPredicted RBP11.55□□□□□ -0.56
SPTAN1-228ENST00000635853 FHOD3Q2V2M9 1422 aa11.55□□□□□ -0.56
SPTAN1-228ENST00000635853 NKTRP30414 1462 aaKnown RBP11.55□□□□□ -0.56
SPTAN1-228ENST00000635853 SMTNL1A8MU46 457 aa11.55□□□□□ -0.56
SPTAN1-228ENST00000635853 FAM193AP78312 1265 aa11.55□□□□□ -0.56
SPTAN1-228ENST00000635853 SCLT1Q96NL6 688 aa11.55□□□□□ -0.56
SPTAN1-228ENST00000635853 TANGO6Q9C0B7 1094 aa11.55□□□□□ -0.56
SPTAN1-228ENST00000635853 DDX24Q9GZR7 859 aaKnown RBP eCLIP11.55□□□□□ -0.56
SPTAN1-228ENST00000635853 DHX29Q7Z478 1369 aaKnown RBP11.55□□□□□ -0.56
SPTAN1-228ENST00000635853 PLEKHH1Q9ULM0 1364 aa11.55□□□□□ -0.56
SPTAN1-228ENST00000635853 MYCNP04198 464 aaPredicted RBP11.55□□□□□ -0.56
SPTAN1-228ENST00000635853 MVPQ14764 893 aaKnown RBP11.55□□□□□ -0.56
SPTAN1-228ENST00000635853 SMC5Q8IY18 1101 aa11.55□□□□□ -0.56
SPTAN1-228ENST00000635853 PEG3Q9GZU2 1588 aa11.54□□□□□ -0.56
SPTAN1-228ENST00000635853 PLEKHO1Q53GL0 409 aaPredicted RBP11.54□□□□□ -0.56
SPTAN1-228ENST00000635853 SDF4Q9BRK5 362 aa11.54□□□□□ -0.56
SPTAN1-228ENST00000635853 RBM27Q9P2N5 1060 aaKnown RBP11.54□□□□□ -0.56
SPTAN1-228ENST00000635853 DNAI2Q9GZS0 605 aa11.54□□□□□ -0.56
SPTAN1-228ENST00000635853 ZNF76P36508 570 aa11.54□□□□□ -0.56
SPTAN1-228ENST00000635853 ERC1Q8IUD2 1116 aa11.54□□□□□ -0.56
SPTAN1-228ENST00000635853 ABTB2Q8N961 1025 aa11.54□□□□□ -0.56
SPTAN1-228ENST00000635853 SEPT11Q9NVA2 429 aaKnown RBP11.54□□□□□ -0.56
SPTAN1-228ENST00000635853 CCDC171Q6TFL3 1326 aa11.54□□□□□ -0.56
SPTAN1-228ENST00000635853 TATP17735 454 aaPredicted RBP11.54□□□□□ -0.56
SPTAN1-228ENST00000635853 ENOX2Q16206 610 aaKnown RBP11.54□□□□□ -0.56
SPTAN1-228ENST00000635853 MYOM3Q5VTT5 1437 aa11.54□□□□□ -0.56
SPTAN1-228ENST00000635853 SMC2O95347 1197 aa11.53□□□□□ -0.56
SPTAN1-228ENST00000635853 JPH4Q96JJ6 628 aa11.53□□□□□ -0.56
SPTAN1-228ENST00000635853 NCOA2Q15596 1464 aa11.53□□□□□ -0.56
SPTAN1-228ENST00000635853 CABP4P57796 275 aa11.53□□□□□ -0.56
SPTAN1-228ENST00000635853 TNMDQ9H2S6 317 aa11.53□□□□□ -0.56
SPTAN1-228ENST00000635853 PIP4K2AP48426 406 aaPredicted RBP11.53□□□□□ -0.56
SPTAN1-228ENST00000635853 NEK4P51957 841 aa11.53□□□□□ -0.56
SPTAN1-228ENST00000635853 TTLL12Q14166 644 aaPredicted RBP11.53□□□□□ -0.56
SPTAN1-228ENST00000635853 CHD1LQ86WJ1 897 aa11.53□□□□□ -0.56
SPTAN1-228ENST00000635853 TOM1L2Q6ZVM7 507 aa11.53□□□□□ -0.56
SPTAN1-228ENST00000635853 SSR1P43307 286 aaKnown RBP11.53□□□□□ -0.56
SPTAN1-228ENST00000635853 PRIM1P49642 420 aaKnown RBP11.53□□□□□ -0.56
SPTAN1-228ENST00000635853 STAC3Q96MF2 364 aa11.53□□□□□ -0.56
SPTAN1-228ENST00000635853 PLCD4Q9BRC7 762 aa11.53□□□□□ -0.56
SPTAN1-228ENST00000635853 LMAN1P49257 510 aa11.52□□□□□ -0.56
SPTAN1-228ENST00000635853 DDX54Q8TDD1 881 aaKnown RBP11.52□□□□□ -0.56
SPTAN1-228ENST00000635853 ZNF830Q96NB3 372 aaPredicted RBP11.52□□□□□ -0.56
SPTAN1-228ENST00000635853 KDM2BQ8NHM5 1336 aa11.52□□□□□ -0.56
SPTAN1-228ENST00000635853 PPP2R1AP30153 589 aa11.52□□□□□ -0.57
SPTAN1-228ENST00000635853 C10orf67Q8IYJ2 551 aa11.52□□□□□ -0.57
SPTAN1-228ENST00000635853 CCDC69A6NI79 296 aa11.52□□□□□ -0.57
SPTAN1-228ENST00000635853 BANK1Q8NDB2 785 aa11.52□□□□□ -0.57
SPTAN1-228ENST00000635853 PIBF1Q8WXW3 757 aa11.52□□□□□ -0.57
SPTAN1-228ENST00000635853 NACAP1Q9BZK3 213 aa11.52□□□□□ -0.57
SPTAN1-228ENST00000635853 TMOD2Q9NZR1 351 aa11.52□□□□□ -0.57
SPTAN1-228ENST00000635853 ZNF445P59923 1031 aa11.52□□□□□ -0.57
SPTAN1-228ENST00000635853 NBPF8Q3BBV2 869 aa11.52□□□□□ -0.57
SPTAN1-228ENST00000635853 EFCC1Q9HA90 598 aa11.52□□□□□ -0.57
SPTAN1-228ENST00000635853 SHTN1A0MZ66 631 aa11.52□□□□□ -0.57
SPTAN1-228ENST00000635853 IGHDP01880 384 aa11.52□□□□□ -0.57
SPTAN1-228ENST00000635853 MNAT1P51948 309 aa11.52□□□□□ -0.57
SPTAN1-228ENST00000635853 ZNHIT6Q9NWK9 470 aaKnown RBP11.52□□□□□ -0.57
SPTAN1-228ENST00000635853 FIBPO43427 364 aa11.51□□□□□ -0.57
SPTAN1-228ENST00000635853 CCDC30Q5VVM6 783 aa11.51□□□□□ -0.57
SPTAN1-228ENST00000635853 GBP3Q9H0R5 595 aa11.51□□□□□ -0.57
SPTAN1-228ENST00000635853 EZRP15311 586 aaKnown RBP11.51□□□□□ -0.57
SPTAN1-228ENST00000635853 CCDC102AQ96A19 550 aa11.51□□□□□ -0.57
SPTAN1-228ENST00000635853 LRRFIP2Q9Y608 721 aaKnown RBP11.51□□□□□ -0.57
SPTAN1-228ENST00000635853 KRBA2Q6ZNG9 492 aa11.5□□□□□ -0.57
SPTAN1-228ENST00000635853 NUP62CLQ9H1M0 184 aa11.5□□□□□ -0.57
SPTAN1-228ENST00000635853 V9GYY5 206 aaPredicted RBP11.5□□□□□ -0.57
SPTAN1-228ENST00000635853 GBP2P32456 591 aaPredicted RBP11.5□□□□□ -0.57
SPTAN1-228ENST00000635853 NF2P35240 595 aa11.5□□□□□ -0.57
SPTAN1-228ENST00000635853 BICDL1Q6ZP65 573 aa11.5□□□□□ -0.57
SPTAN1-228ENST00000635853 HIP1O00291 1037 aa11.5□□□□□ -0.57
SPTAN1-228ENST00000635853 STIM1Q13586 685 aa11.5□□□□□ -0.57
SPTAN1-228ENST00000635853 WDR70Q9NW82 654 aa11.5□□□□□ -0.57
SPTAN1-228ENST00000635853 CT47B1P0C2W7 299 aaPredicted RBP11.5□□□□□ -0.57
SPTAN1-228ENST00000635853 MAP3K11Q16584 847 aa11.5□□□□□ -0.57
SPTAN1-228ENST00000635853 ZNF396Q96N95 335 aaPredicted RBP11.5□□□□□ -0.57
SPTAN1-228ENST00000635853 MPHOSPH8Q99549 860 aa11.5□□□□□ -0.57
SPTAN1-228ENST00000635853 RBSNQ9H1K0 784 aa11.5□□□□□ -0.57
SPTAN1-228ENST00000635853 CLASRPQ8N2M8 674 aaKnown RBP11.49□□□□□ -0.57
SPTAN1-228ENST00000635853 NUP133Q8WUM0 1156 aa11.49□□□□□ -0.57
SPTAN1-228ENST00000635853 BCL2L12Q9HB09 334 aa11.49□□□□□ -0.57
SPTAN1-228ENST00000635853 CLIP2Q9UDT6 1046 aa11.49□□□□□ -0.57
SPTAN1-228ENST00000635853 PTPRGP23470 1445 aa11.49□□□□□ -0.57
SPTAN1-228ENST00000635853 LUC7LQ9NQ29 371 aaKnown RBP11.49□□□□□ -0.57
SPTAN1-228ENST00000635853 RIOK3O14730 519 aaKnown RBP11.49□□□□□ -0.57
SPTAN1-228ENST00000635853 GOLGA6L10A6NI86 522 aa11.49□□□□□ -0.57
SPTAN1-228ENST00000635853 PPP4R3AQ6IN85 833 aa11.49□□□□□ -0.57
SPTAN1-228ENST00000635853 GAS2L2Q8NHY3 880 aa11.49□□□□□ -0.57
SPTAN1-228ENST00000635853 POTEB2H3BUK9 544 aa11.48□□□□□ -0.57
SPTAN1-228ENST00000635853 SSBP05455 408 aaKnown RBP eCLIP11.48□□□□□ -0.57
Retrieved 100 of 20,778 RNA–protein pairs in 127.9 ms