RNA–Protein interactions for RNA: ENST00000635721.1

SSRP1-205, Transcript of structure specific recognition protein 1, humanhuman

TSL 5

Gene SSRP1, Length 675 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSRP1-205ENST00000635721 HOXC9P31274 260 aa9.69□□□□□ -0.86
SSRP1-205ENST00000635721 AMPHP49418 695 aa9.69□□□□□ -0.86
SSRP1-205ENST00000635721 HAP1P54257 671 aaPredicted RBP9.69□□□□□ -0.86
SSRP1-205ENST00000635721 WDR63Q8IWG1 891 aa9.69□□□□□ -0.86
SSRP1-205ENST00000635721 KIAA0232Q92628 1395 aa9.69□□□□□ -0.86
SSRP1-205ENST00000635721 JCADQ9P266 1359 aa9.69□□□□□ -0.86
SSRP1-205ENST00000635721 LRP6O75581 1613 aa9.68□□□□□ -0.86
SSRP1-205ENST00000635721 COL3A1P02461 1466 aaPredicted RBP9.68□□□□□ -0.86
SSRP1-205ENST00000635721 GOLGA6L3A6NEY3 463 aa9.68□□□□□ -0.86
SSRP1-205ENST00000635721 MCM4P33991 863 aa9.68□□□□□ -0.86
SSRP1-205ENST00000635721 IP6K1Q92551 441 aa9.68□□□□□ -0.86
SSRP1-205ENST00000635721 SNX21Q969T3 373 aa9.68□□□□□ -0.86
SSRP1-205ENST00000635721 LTV1Q96GA3 475 aaPredicted RBP9.68□□□□□ -0.86
SSRP1-205ENST00000635721 CHMP5Q9NZZ3 219 aa9.68□□□□□ -0.86
SSRP1-205ENST00000635721 IBTKQ9P2D0 1353 aaPredicted RBP9.67□□□□□ -0.86
SSRP1-205ENST00000635721 SENP3-EIF4A1A0A087X0R7 540 aa9.67□□□□□ -0.86
SSRP1-205ENST00000635721 XRCC6P12956 609 aaKnown RBP eCLIP9.67□□□□□ -0.86
SSRP1-205ENST00000635721 IL13P35225 146 aa9.67□□□□□ -0.86
SSRP1-205ENST00000635721 EIF4A2Q14240 407 aaKnown RBP9.67□□□□□ -0.86
SSRP1-205ENST00000635721 SKOR2Q2VWA4 1001 aaPredicted RBP9.67□□□□□ -0.86
SSRP1-205ENST00000635721 CLEC17AQ6ZS10 378 aa9.67□□□□□ -0.86
SSRP1-205ENST00000635721 RRAGDQ9NQL2 400 aaPredicted RBP9.67□□□□□ -0.86
SSRP1-205ENST00000635721 LMO7Q8WWI1 1683 aa9.67□□□□□ -0.86
SSRP1-205ENST00000635721 CAMTA1Q9Y6Y1 1673 aa9.67□□□□□ -0.86
SSRP1-205ENST00000635721 DDX11L8A8MPP1 907 aa9.66□□□□□ -0.86
SSRP1-205ENST00000635721 IGHDP01880 384 aa9.66□□□□□ -0.86
SSRP1-205ENST00000635721 TPM2P07951 284 aa9.66□□□□□ -0.86
SSRP1-205ENST00000635721 DDIT3P35638 169 aa9.66□□□□□ -0.86
SSRP1-205ENST00000635721 SLC4A3P48751 1232 aa9.66□□□□□ -0.86
SSRP1-205ENST00000635721 CPDO75976 1380 aa9.65□□□□□ -0.86
SSRP1-205ENST00000635721 PLCH1Q4KWH8 1693 aa9.65□□□□□ -0.86
SSRP1-205ENST00000635721 DIAPH1O60610 1272 aaKnown RBP9.65□□□□□ -0.86
SSRP1-205ENST00000635721 HS1BP3Q53T59 392 aa9.65□□□□□ -0.86
SSRP1-205ENST00000635721 RWDD1Q9H446 243 aaPredicted RBP9.65□□□□□ -0.86
SSRP1-205ENST00000635721 PRDM11Q9NQV5 511 aa9.65□□□□□ -0.86
SSRP1-205ENST00000635721 ZBTB4Q9P1Z0 1013 aaPredicted RBP9.65□□□□□ -0.86
SSRP1-205ENST00000635721 COL14A1Q05707 1796 aaKnown RBP9.65□□□□□ -0.87
SSRP1-205ENST00000635721 CDK12Q9NYV4 1490 aaPredicted RBP9.65□□□□□ -0.87
SSRP1-205ENST00000635721 FLT4P35916 1363 aa9.64□□□□□ -0.87
SSRP1-205ENST00000635721 HDAC1Q13547 482 aaPredicted RBP9.64□□□□□ -0.87
SSRP1-205ENST00000635721 NBPF6Q5VWK0 638 aa9.64□□□□□ -0.87
SSRP1-205ENST00000635721 ILDR1Q86SU0 546 aaPredicted RBP9.64□□□□□ -0.87
SSRP1-205ENST00000635721 USHBP1Q8N6Y0 703 aa9.64□□□□□ -0.87
SSRP1-205ENST00000635721 ANKRD24Q8TF21 1146 aa9.64□□□□□ -0.87
SSRP1-205ENST00000635721 NBPF4Q96M43 638 aa9.64□□□□□ -0.87
SSRP1-205ENST00000635721 EYA1Q99502 592 aa9.64□□□□□ -0.87
SSRP1-205ENST00000635721 TBC1D2Q9BYX2 928 aa9.64□□□□□ -0.87
SSRP1-205ENST00000635721 PNNQ9H307 717 aaKnown RBP9.64□□□□□ -0.87
SSRP1-205ENST00000635721 BTG4Q9NY30 223 aa9.64□□□□□ -0.87
SSRP1-205ENST00000635721 RGPD1P0DJD0 1748 aa9.64□□□□□ -0.87
SSRP1-205ENST00000635721 SPATA31A6Q5VVP1 1343 aa9.63□□□□□ -0.87
SSRP1-205ENST00000635721 NRAPQ86VF7 1730 aa9.63□□□□□ -0.87
SSRP1-205ENST00000635721 U2SURPO15042 1029 aaKnown RBP9.63□□□□□ -0.87
SSRP1-205ENST00000635721 HMOX1P09601 288 aa9.63□□□□□ -0.87
SSRP1-205ENST00000635721 CFAP53Q96M91 514 aa9.63□□□□□ -0.87
SSRP1-205ENST00000635721 C8orf37Q96NL8 207 aa9.63□□□□□ -0.87
SSRP1-205ENST00000635721 STRN4Q9NRL3 753 aa9.63□□□□□ -0.87
SSRP1-205ENST00000635721 KIF16BQ96L93 1317 aa9.62□□□□□ -0.87
SSRP1-205ENST00000635721 RBM25P49756 843 aaKnown RBP9.62□□□□□ -0.87
SSRP1-205ENST00000635721 LARP1Q6PKG0 1096 aaKnown RBP9.62□□□□□ -0.87
SSRP1-205ENST00000635721 AEBP1Q8IUX7 1158 aa9.62□□□□□ -0.87
SSRP1-205ENST00000635721 WWC1Q8IX03 1113 aa9.62□□□□□ -0.87
SSRP1-205ENST00000635721 SMC5Q8IY18 1101 aa9.62□□□□□ -0.87
SSRP1-205ENST00000635721 CCDC146Q8IYE0 955 aa9.62□□□□□ -0.87
SSRP1-205ENST00000635721 RTL1A6NKG5 1358 aa9.62□□□□□ -0.87
SSRP1-205ENST00000635721 COL5A2P05997 1499 aaPredicted RBP9.61□□□□□ -0.87
SSRP1-205ENST00000635721 TRAK2O60296 914 aa9.61□□□□□ -0.87
SSRP1-205ENST00000635721 HSP90AA1P07900 732 aaKnown RBP9.61□□□□□ -0.87
SSRP1-205ENST00000635721 U2AF1L5P0DN76 240 aaPredicted RBP9.61□□□□□ -0.87
SSRP1-205ENST00000635721 RGS3P49796 1198 aa9.61□□□□□ -0.87
SSRP1-205ENST00000635721 RARSP54136 660 aaKnown RBP9.61□□□□□ -0.87
SSRP1-205ENST00000635721 EVA1CP58658 441 aa9.61□□□□□ -0.87
SSRP1-205ENST00000635721 U2AF1Q01081 240 aaKnown RBP eCLIP9.61□□□□□ -0.87
SSRP1-205ENST00000635721 KLHL34Q8N239 644 aa9.61□□□□□ -0.87
SSRP1-205ENST00000635721 NGLY1Q96IV0 654 aa9.61□□□□□ -0.87
SSRP1-205ENST00000635721 PPP1R9BQ96SB3 815 aa9.61□□□□□ -0.87
SSRP1-205ENST00000635721 MAP7D2Q96T17 732 aa9.61□□□□□ -0.87
SSRP1-205ENST00000635721 PDCL3Q9H2J4 239 aa9.61□□□□□ -0.87
SSRP1-205ENST00000635721 MYH16Q9H6N6 1097 aa9.61□□□□□ -0.87
SSRP1-205ENST00000635721 KIF24Q5T7B8 1368 aa9.61□□□□□ -0.87
SSRP1-205ENST00000635721 SLIT2O94813 1529 aa9.61□□□□□ -0.87
SSRP1-205ENST00000635721 FAM208AQ9UK61 1670 aaKnown RBP9.61□□□□□ -0.87
SSRP1-205ENST00000635721 ERBB3P21860 1342 aa9.6□□□□□ -0.87
SSRP1-205ENST00000635721 NWD2Q9ULI1 1742 aa9.6□□□□□ -0.87
SSRP1-205ENST00000635721 ESPNB1AK53 854 aa9.6□□□□□ -0.87
SSRP1-205ENST00000635721 APAF1O14727 1248 aa9.6□□□□□ -0.87
SSRP1-205ENST00000635721 SEC24BO95487 1268 aa9.6□□□□□ -0.87
SSRP1-205ENST00000635721 CSB-PGBD3P0DP91 1061 aa9.6□□□□□ -0.87
SSRP1-205ENST00000635721 BRPF1P55201 1214 aaPredicted RBP9.6□□□□□ -0.87
SSRP1-205ENST00000635721 HSP90AA2PQ14568 343 aaPredicted RBP9.6□□□□□ -0.87
SSRP1-205ENST00000635721 MEX3CQ5U5Q3 659 aaKnown RBP9.6□□□□□ -0.87
SSRP1-205ENST00000635721 SULT6B1Q6IMI4 303 aa9.6□□□□□ -0.87
SSRP1-205ENST00000635721 CFAP44Q96MT7 982 aa9.6□□□□□ -0.87
SSRP1-205ENST00000635721 BCL9LQ86UU0 1499 aa9.59□□□□□ -0.87
SSRP1-205ENST00000635721 DLG5Q8TDM6 1919 aa9.59□□□□□ -0.87
SSRP1-205ENST00000635721 BCAR3O75815 825 aa9.59□□□□□ -0.87
SSRP1-205ENST00000635721 RUNDC1Q96C34 613 aa9.59□□□□□ -0.87
SSRP1-205ENST00000635721 PLEKHF1Q96S99 279 aa9.59□□□□□ -0.87
SSRP1-205ENST00000635721 GRPEL1Q9HAV7 217 aa9.59□□□□□ -0.87
SSRP1-205ENST00000635721 SPINK5Q9NQ38 1064 aaPredicted RBP9.59□□□□□ -0.87
Retrieved 100 of 20,778 RNA–protein pairs in 36.7 ms