RNA–Protein interactions for RNA: ENST00000635214.1

PATJ-216, Transcript of PATJ, crumbs cell polarity complex component, humanhuman

TSL 1 (best)

Gene PATJ, Length 4,863 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PATJ-216ENST00000635214 ZSCAN30Q86W11 494 aa10.49□□□□□ -0.73
PATJ-216ENST00000635214 PDCL3Q9H2J4 239 aa10.49□□□□□ -0.73
PATJ-216ENST00000635214 MYO3AQ8NEV4 1616 aa10.49□□□□□ -0.73
PATJ-216ENST00000635214 GOLGA6L7A0A1B0GV03 622 aa10.49□□□□□ -0.73
PATJ-216ENST00000635214 RABEP1Q15276 862 aa10.49□□□□□ -0.73
PATJ-216ENST00000635214 CWC22Q9HCG8 908 aaKnown RBP10.49□□□□□ -0.73
PATJ-216ENST00000635214 CIZ1Q9ULV3 898 aaPredicted RBP10.49□□□□□ -0.73
PATJ-216ENST00000635214 RRP7AQ9Y3A4 280 aaKnown RBP10.49□□□□□ -0.73
PATJ-216ENST00000635214 C3P01024 1663 aa10.49□□□□□ -0.73
PATJ-216ENST00000635214 PDCP20941 246 aa10.48□□□□□ -0.73
PATJ-216ENST00000635214 HSP90AB3PQ58FF7 597 aa10.48□□□□□ -0.73
PATJ-216ENST00000635214 SDF4Q9BRK5 362 aa10.48□□□□□ -0.73
PATJ-216ENST00000635214 AMOTL2Q9Y2J4 779 aa10.48□□□□□ -0.73
PATJ-216ENST00000635214 CAGE1Q8TC20 777 aa10.48□□□□□ -0.73
PATJ-216ENST00000635214 PDE3AQ14432 1141 aa10.48□□□□□ -0.73
PATJ-216ENST00000635214 AXDND1Q5T1B0 1012 aaPredicted RBP10.48□□□□□ -0.73
PATJ-216ENST00000635214 WDR63Q8IWG1 891 aa10.48□□□□□ -0.73
PATJ-216ENST00000635214 MINK1Q8N4C8 1332 aaPredicted RBP10.48□□□□□ -0.73
PATJ-216ENST00000635214 HSP90AB4PQ58FF6 505 aa10.47□□□□□ -0.73
PATJ-216ENST00000635214 PNISRQ8TF01 805 aaKnown RBP10.47□□□□□ -0.73
PATJ-216ENST00000635214 ZNF142P52746 1687 aaPredicted RBP10.47□□□□□ -0.73
PATJ-216ENST00000635214 ZFYVE9O95405 1425 aa10.46□□□□□ -0.73
PATJ-216ENST00000635214 PRPF40AO75400 957 aaKnown RBP10.46□□□□□ -0.73
PATJ-216ENST00000635214 LRRC59Q96AG4 307 aaKnown RBP10.46□□□□□ -0.73
PATJ-216ENST00000635214 SLC26A8Q96RN1 970 aa10.46□□□□□ -0.73
PATJ-216ENST00000635214 MED14O60244 1454 aa10.46□□□□□ -0.73
PATJ-216ENST00000635214 SAFBQ15424 915 aaKnown RBP eCLIP10.46□□□□□ -0.73
PATJ-216ENST00000635214 SMARCE1Q969G3 411 aa10.46□□□□□ -0.73
PATJ-216ENST00000635214 ZRSR2Q15696 482 aaKnown RBP10.46□□□□□ -0.74
PATJ-216ENST00000635214 PUS7Q96PZ0 661 aaKnown RBP10.46□□□□□ -0.74
PATJ-216ENST00000635214 LNPKQ9C0E8 428 aa10.46□□□□□ -0.74
PATJ-216ENST00000635214 KDM5AP29375 1690 aaKnown RBP10.46□□□□□ -0.74
PATJ-216ENST00000635214 CCDC192P0DO97 292 aa10.46□□□□□ -0.74
PATJ-216ENST00000635214 NAP1L1P55209 391 aaKnown RBP10.46□□□□□ -0.74
PATJ-216ENST00000635214 SUGP2Q8IX01 1082 aaKnown RBP eCLIP10.46□□□□□ -0.74
PATJ-216ENST00000635214 DEPDC5O75140 1603 aa10.46□□□□□ -0.74
PATJ-216ENST00000635214 SLIT1O75093 1534 aa10.45□□□□□ -0.74
PATJ-216ENST00000635214 KINO60870 393 aaKnown RBP10.45□□□□□ -0.74
PATJ-216ENST00000635214 TRDNQ13061 729 aa10.45□□□□□ -0.74
PATJ-216ENST00000635214 CFAP70Q5T0N1 1121 aa10.45□□□□□ -0.74
PATJ-216ENST00000635214 CALCOCO1Q9P1Z2 691 aa10.45□□□□□ -0.74
PATJ-216ENST00000635214 NPHP3Q7Z494 1330 aa10.45□□□□□ -0.74
PATJ-216ENST00000635214 ERC2O15083 957 aa10.45□□□□□ -0.74
PATJ-216ENST00000635214 IFIT2P09913 472 aaKnown RBP10.45□□□□□ -0.74
PATJ-216ENST00000635214 MCM4P33991 863 aa10.45□□□□□ -0.74
PATJ-216ENST00000635214 PDILTQ8N807 584 aa10.45□□□□□ -0.74
PATJ-216ENST00000635214 C11orf95C9JLR9 678 aaPredicted RBP10.45□□□□□ -0.74
PATJ-216ENST00000635214 CSB-PGBD3P0DP91 1061 aa10.45□□□□□ -0.74
PATJ-216ENST00000635214 PSMA5P28066 241 aa10.45□□□□□ -0.74
PATJ-216ENST00000635214 FILIP1LQ4L180 1135 aa10.44□□□□□ -0.74
PATJ-216ENST00000635214 INCENPQ9NQS7 918 aa10.44□□□□□ -0.74
PATJ-216ENST00000635214 KIF2AO00139 706 aaPredicted RBP10.44□□□□□ -0.74
PATJ-216ENST00000635214 PIP4K2AP48426 406 aaPredicted RBP10.44□□□□□ -0.74
PATJ-216ENST00000635214 ABCC11Q96J66 1382 aa10.44□□□□□ -0.74
PATJ-216ENST00000635214 RIPK4P57078 832 aa10.44□□□□□ -0.74
PATJ-216ENST00000635214 C1orf141Q5JVX7 400 aa10.44□□□□□ -0.74
PATJ-216ENST00000635214 ZNF772Q68DY9 489 aaPredicted RBP10.44□□□□□ -0.74
PATJ-216ENST00000635214 ELL2O00472 640 aaPredicted RBP10.43□□□□□ -0.74
PATJ-216ENST00000635214 GOLGA6L10A6NI86 522 aa10.43□□□□□ -0.74
PATJ-216ENST00000635214 SMC2O95347 1197 aa10.43□□□□□ -0.74
PATJ-216ENST00000635214 NGLY1Q96IV0 654 aa10.43□□□□□ -0.74
PATJ-216ENST00000635214 SYNMO15061 1565 aa10.43□□□□□ -0.74
PATJ-216ENST00000635214 ZNF330Q9Y3S2 320 aaPredicted RBP10.42□□□□□ -0.74
PATJ-216ENST00000635214 OFD1O75665 1012 aa10.42□□□□□ -0.74
PATJ-216ENST00000635214 NUTM2DQ5VT03 806 aaPredicted RBP10.42□□□□□ -0.74
PATJ-216ENST00000635214 WWC1Q8IX03 1113 aa10.42□□□□□ -0.74
PATJ-216ENST00000635214 GAS2L2Q8NHY3 880 aa10.42□□□□□ -0.74
PATJ-216ENST00000635214 DCCP43146 1447 aa10.42□□□□□ -0.74
PATJ-216ENST00000635214 NEXNQ0ZGT2 675 aa10.42□□□□□ -0.74
PATJ-216ENST00000635214 NBPF1Q3BBV0 1214 aa10.41□□□□□ -0.74
PATJ-216ENST00000635214 VPS53Q5VIR6 699 aa10.41□□□□□ -0.74
PATJ-216ENST00000635214 ARHGAP23Q9P227 1491 aa10.41□□□□□ -0.74
PATJ-216ENST00000635214 VWDEQ8N2E2 1590 aa10.41□□□□□ -0.74
PATJ-216ENST00000635214 ERLIN2O94905 339 aa10.41□□□□□ -0.74
PATJ-216ENST00000635214 SF3B2Q13435 895 aaKnown RBP10.41□□□□□ -0.74
PATJ-216ENST00000635214 WDR33Q9C0J8 1336 aaKnown RBP10.41□□□□□ -0.74
PATJ-216ENST00000635214 GIMAP7Q8NHV1 300 aa10.41□□□□□ -0.74
PATJ-216ENST00000635214 DDX58O95786 925 aaKnown RBP10.41□□□□□ -0.74
PATJ-216ENST00000635214 PDIA4P13667 645 aaKnown RBP10.41□□□□□ -0.74
PATJ-216ENST00000635214 FBXW7Q969H0 707 aa10.41□□□□□ -0.74
PATJ-216ENST00000635214 PLCD4Q9BRC7 762 aa10.41□□□□□ -0.74
PATJ-216ENST00000635214 ADAMTS8Q9UP79 889 aa10.41□□□□□ -0.74
PATJ-216ENST00000635214 CEP152O94986 1710 aa10.41□□□□□ -0.74
PATJ-216ENST00000635214 NEK4P51957 841 aa10.4□□□□□ -0.74
PATJ-216ENST00000635214 GBP3Q9H0R5 595 aa10.4□□□□□ -0.74
PATJ-216ENST00000635214 ZNF335Q9H4Z2 1342 aaPredicted RBP10.4□□□□□ -0.74
PATJ-216ENST00000635214 K7ELQ4 463 aaPredicted RBP10.4□□□□□ -0.74
PATJ-216ENST00000635214 SPC24Q8NBT2 197 aa10.4□□□□□ -0.74
PATJ-216ENST00000635214 ZNF396Q96N95 335 aaPredicted RBP10.4□□□□□ -0.74
PATJ-216ENST00000635214 TMX4Q9H1E5 349 aaPredicted RBP10.4□□□□□ -0.74
PATJ-216ENST00000635214 C9orf78Q9NZ63 289 aaPredicted RBP10.4□□□□□ -0.74
PATJ-216ENST00000635214 TMEM94Q12767 1356 aa10.4□□□□□ -0.74
PATJ-216ENST00000635214 SPATA31A6Q5VVP1 1343 aa10.4□□□□□ -0.74
PATJ-216ENST00000635214 AEBP1Q8IUX7 1158 aa10.4□□□□□ -0.74
PATJ-216ENST00000635214 TXLNBQ8N3L3 684 aa10.4□□□□□ -0.74
PATJ-216ENST00000635214 FAM107BQ9H098 131 aa10.4□□□□□ -0.74
PATJ-216ENST00000635214 G3BP1Q13283 466 aaKnown RBP eCLIP10.4□□□□□ -0.75
PATJ-216ENST00000635214 CT47A1Q5JQC4 288 aaPredicted RBP10.4□□□□□ -0.75
PATJ-216ENST00000635214 SLAIN2Q9P270 581 aa10.4□□□□□ -0.75
PATJ-216ENST00000635214 TEFQ10587 303 aa10.39□□□□□ -0.75
Retrieved 100 of 20,778 RNA–protein pairs in 48.1 ms