RNA–Protein interactions for RNA: ENST00000633899.1

SF1-221, Transcript of splicing factor 1, humanhuman

TSL 4

Gene SF1, Length 591 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF1-221ENST00000633899 NHSQ6T4R5 1651 aa28.32■■■□□ 2.12
SF1-221ENST00000633899 PARD3Q8TEW0 1356 aa28.32■■■□□ 2.12
SF1-221ENST00000633899 EZH2Q15910 746 aaKnown RBP28.31■■■□□ 2.12
SF1-221ENST00000633899 EYA1Q99502 592 aa28.31■■■□□ 2.12
SF1-221ENST00000633899 NCAPD2Q15021 1401 aa28.29■■■□□ 2.12
SF1-221ENST00000633899 ACSBG1Q96GR2 724 aa28.29■■■□□ 2.12
SF1-221ENST00000633899 CAMKK2Q96RR4 588 aa28.28■■■□□ 2.12
SF1-221ENST00000633899 RGPD3A6NKT7 1758 aaPredicted RBP28.28■■■□□ 2.12
SF1-221ENST00000633899 RGPD4Q7Z3J3 1758 aa28.28■■■□□ 2.12
SF1-221ENST00000633899 RREB1Q92766 1687 aa28.27■■■□□ 2.12
SF1-221ENST00000633899 PKD1L3Q7Z443 1732 aa28.26■■■□□ 2.12
SF1-221ENST00000633899 PCDH11XQ9BZA7 1347 aa28.26■■■□□ 2.11
SF1-221ENST00000633899 PCDH11YQ9BZA8 1340 aa28.26■■■□□ 2.11
SF1-221ENST00000633899 MTHFSP49914 203 aa28.26■■■□□ 2.11
SF1-221ENST00000633899 DOT1LQ8TEK3 1739 aa28.26■■■□□ 2.11
SF1-221ENST00000633899 PTF1AQ7RTS3 328 aa28.24■■■□□ 2.11
SF1-221ENST00000633899 IGSF1Q8N6C5 1336 aa28.23■■■□□ 2.11
SF1-221ENST00000633899 BTAF1O14981 1849 aa28.23■■■□□ 2.11
SF1-221ENST00000633899 KCNQ2O43526 872 aa28.23■■■□□ 2.11
SF1-221ENST00000633899 SPG7Q9UQ90 795 aa28.23■■■□□ 2.11
SF1-221ENST00000633899 NUP188Q5SRE5 1749 aa28.23■■■□□ 2.11
SF1-221ENST00000633899 PLSCR1O15162 318 aa28.22■■■□□ 2.11
SF1-221ENST00000633899 SYTL4Q96C24 671 aaPredicted RBP28.21■■■□□ 2.11
SF1-221ENST00000633899 IL13P35225 146 aa28.17■■■□□ 2.1
SF1-221ENST00000633899 NBPF14Q5TI25 921 aa28.16■■■□□ 2.1
SF1-221ENST00000633899 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP28.16■■■□□ 2.1
SF1-221ENST00000633899 PLEKHG2Q9H7P9 1386 aa28.15■■■□□ 2.1
SF1-221ENST00000633899 DIAPH1O60610 1272 aaKnown RBP28.15■■■□□ 2.1
SF1-221ENST00000633899 CYP27B1O15528 508 aa28.14■■■□□ 2.1
SF1-221ENST00000633899 PRIM1P49642 420 aaKnown RBP28.14■■■□□ 2.1
SF1-221ENST00000633899 SULT6B1Q6IMI4 303 aa28.14■■■□□ 2.1
SF1-221ENST00000633899 PSDA5PKW4 1024 aaPredicted RBP28.13■■■□□ 2.09
SF1-221ENST00000633899 AEBP1Q8IUX7 1158 aa28.12■■■□□ 2.09
SF1-221ENST00000633899 CFAP53Q96M91 514 aa28.12■■■□□ 2.09
SF1-221ENST00000633899 TXNRD1Q16881 649 aa28.11■■■□□ 2.09
SF1-221ENST00000633899 PLEKHO1Q53GL0 409 aaPredicted RBP28.11■■■□□ 2.09
SF1-221ENST00000633899 IFNL2Q8IZJ0 200 aa28.11■■■□□ 2.09
SF1-221ENST00000633899 R3HDM1Q15032 1099 aaKnown RBP28.1■■■□□ 2.09
SF1-221ENST00000633899 ITGB4P16144 1822 aa28.1■■■□□ 2.09
SF1-221ENST00000633899 DDX10Q13206 875 aaKnown RBP28.09■■■□□ 2.09
SF1-221ENST00000633899 KDRP35968 1356 aa28.09■■■□□ 2.09
SF1-221ENST00000633899 TOGARAM1Q9Y4F4 1720 aa28.09■■■□□ 2.09
SF1-221ENST00000633899 PPP2R1AP30153 589 aa28.08■■■□□ 2.09
SF1-221ENST00000633899 AMOTQ4VCS5 1084 aa28.08■■■□□ 2.09
SF1-221ENST00000633899 PHKG2P15735 406 aa28.07■■■□□ 2.08
SF1-221ENST00000633899 COL3A1P02461 1466 aaPredicted RBP28.07■■■□□ 2.08
SF1-221ENST00000633899 U2SURPO15042 1029 aaKnown RBP28.05■■■□□ 2.08
SF1-221ENST00000633899 HMOX1P09601 288 aa28.05■■■□□ 2.08
SF1-221ENST00000633899 NKX1-1Q15270 411 aaPredicted RBP28.05■■■□□ 2.08
SF1-221ENST00000633899 ZNF530Q6P9A1 599 aaPredicted RBP28.05■■■□□ 2.08
SF1-221ENST00000633899 PROM2Q8N271 834 aa28.05■■■□□ 2.08
SF1-221ENST00000633899 MPRIPQ6WCQ1 1025 aa28.04■■■□□ 2.08
SF1-221ENST00000633899 LY75O60449 1722 aa28.04■■■□□ 2.08
SF1-221ENST00000633899 HSP90AB1P08238 724 aaKnown RBP28.03■■■□□ 2.08
SF1-221ENST00000633899 C1orf141Q5JVX7 400 aa28.03■■■□□ 2.08
SF1-221ENST00000633899 STK32BQ9NY57 414 aa28.01■■■□□ 2.07
SF1-221ENST00000633899 NUDCQ9Y266 331 aa28■■■□□ 2.07
SF1-221ENST00000633899 SLC27A3Q5K4L6 730 aa27.99■■■□□ 2.07
SF1-221ENST00000633899 TMOD3Q9NYL9 352 aa27.99■■■□□ 2.07
SF1-221ENST00000633899 ANO8Q9HCE9 1232 aaPredicted RBP27.98■■■□□ 2.07
SF1-221ENST00000633899 DCAF5Q96JK2 942 aa27.97■■■□□ 2.07
SF1-221ENST00000633899 RALBP1Q15311 655 aa27.95■■■□□ 2.06
SF1-221ENST00000633899 SMARCC1Q92922 1105 aaPredicted RBP27.95■■■□□ 2.06
SF1-221ENST00000633899 CCNL1Q9UK58 526 aaPredicted RBP27.95■■■□□ 2.06
SF1-221ENST00000633899 PAPPAQ13219 1627 aa27.95■■■□□ 2.06
SF1-221ENST00000633899 PIGBQ92521 554 aa27.94■■■□□ 2.06
SF1-221ENST00000633899 PALLDQ8WX93 1383 aa27.94■■■□□ 2.06
SF1-221ENST00000633899 VIRMAQ69YN4 1812 aaKnown RBP27.93■■■□□ 2.06
SF1-221ENST00000633899 SLC15A2Q16348 729 aa27.93■■■□□ 2.06
SF1-221ENST00000633899 LRRC4BQ9NT99 713 aa27.93■■■□□ 2.06
SF1-221ENST00000633899 SCN11AQ9UI33 1791 aa27.92■■■□□ 2.06
SF1-221ENST00000633899 ERVV-2B6SEH9 535 aa27.92■■■□□ 2.06
SF1-221ENST00000633899 AKAP4Q5JQC9 854 aa27.92■■■□□ 2.06
SF1-221ENST00000633899 LRP5O75197 1615 aa27.92■■■□□ 2.06
SF1-221ENST00000633899 U2AF1L5P0DN76 240 aaPredicted RBP27.91■■■□□ 2.06
SF1-221ENST00000633899 U2AF1Q01081 240 aaKnown RBP eCLIP27.91■■■□□ 2.061e-19■■■■■ 60.2
SF1-221ENST00000633899 KDM6AO15550 1401 aaPredicted RBP27.91■■■□□ 2.06
SF1-221ENST00000633899 KCNQ4P56696 695 aa27.9■■■□□ 2.06
SF1-221ENST00000633899 CABP4P57796 275 aa27.9■■■□□ 2.06
SF1-221ENST00000633899 C5P01031 1676 aa27.89■■■□□ 2.06
SF1-221ENST00000633899 HMGB2P26583 209 aaKnown RBP27.89■■■□□ 2.06
SF1-221ENST00000633899 MTHFSDQ2M296 383 aaKnown RBP27.88■■■□□ 2.05
SF1-221ENST00000633899 CASZ1Q86V15 1759 aa27.87■■■□□ 2.05
SF1-221ENST00000633899 TAF1LQ8IZX4 1826 aa27.86■■■□□ 2.05
SF1-221ENST00000633899 PRKAR2BP31323 418 aa27.86■■■□□ 2.05
SF1-221ENST00000633899 GAS2L2Q8NHY3 880 aa27.86■■■□□ 2.05
SF1-221ENST00000633899 ZNF827Q17R98 1081 aa27.85■■■□□ 2.05
SF1-221ENST00000633899 QSER1Q2KHR3 1735 aa27.84■■■□□ 2.05
SF1-221ENST00000633899 ZNF316A6NFI3 1004 aaPredicted RBP27.84■■■□□ 2.05
SF1-221ENST00000633899 RSPH6AQ9H0K4 717 aa27.84■■■□□ 2.05
SF1-221ENST00000633899 ASAP1Q9ULH1 1129 aa27.84■■■□□ 2.05
SF1-221ENST00000633899 MYBBP1AQ9BQG0 1328 aaKnown RBP27.83■■■□□ 2.05
SF1-221ENST00000633899 AKT1S1Q96B36 256 aa27.82■■■□□ 2.04
SF1-221ENST00000633899 ATG3Q9NT62 314 aa27.82■■■□□ 2.04
SF1-221ENST00000633899 TFCP2L1Q9NZI6 479 aa27.82■■■□□ 2.04
SF1-221ENST00000633899 TUBGCP6Q96RT7 1819 aa27.82■■■□□ 2.04
SF1-221ENST00000633899 LOC102724428A0A0B4J2F2 783 aa27.81■■■□□ 2.04
SF1-221ENST00000633899 FCHSD2O94868 740 aa27.81■■■□□ 2.04
SF1-221ENST00000633899 NEFMP07197 916 aa27.81■■■□□ 2.04
SF1-221ENST00000633899 SIK1P57059 783 aa27.81■■■□□ 2.04
Retrieved 100 of 20,778 RNA–protein pairs in 213.5 ms