RNA–Protein interactions for RNA: ENST00000631641.1

DDX3X-222, Transcript of DEAD-box helicase 3 X-linked, human

TSL 3

Gene DDX3X, Length 583 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
DDX3X-222	ENST00000631641	NBPF6	Q5VWK0	638 aa		11.45	□□□□□ -0.58
DDX3X-222	ENST00000631641	RAPGEF4	Q8WZA2	1011 aa		11.45	□□□□□ -0.58
DDX3X-222	ENST00000631641	NBPF4	Q96M43	638 aa		11.45	□□□□□ -0.58
DDX3X-222	ENST00000631641	NSD3	Q9BZ95	1437 aa		11.44	□□□□□ -0.58
DDX3X-222	ENST00000631641	SYTL4	Q96C24	671 aa	Predicted RBP	11.44	□□□□□ -0.58
DDX3X-222	ENST00000631641	ATF5	Q9Y2D1	282 aa	Predicted RBP	11.44	□□□□□ -0.58
DDX3X-222	ENST00000631641	PAPPA	Q13219	1627 aa		11.44	□□□□□ -0.58
DDX3X-222	ENST00000631641	KIF7	Q2M1P5	1343 aa		11.43	□□□□□ -0.58
DDX3X-222	ENST00000631641	WASHC2A	Q641Q2	1341 aa		11.43	□□□□□ -0.58
DDX3X-222	ENST00000631641	TAT	P17735	454 aa	Predicted RBP	11.43	□□□□□ -0.58
DDX3X-222	ENST00000631641	PRIM1	P49642	420 aa	Known RBP	11.43	□□□□□ -0.58
DDX3X-222	ENST00000631641	ZNF827	Q17R98	1081 aa		11.43	□□□□□ -0.58
DDX3X-222	ENST00000631641	LRRC4B	Q9NT99	713 aa		11.43	□□□□□ -0.58
DDX3X-222	ENST00000631641	BTAF1	O14981	1849 aa		11.43	□□□□□ -0.58
DDX3X-222	ENST00000631641	MYOM1	P52179	1685 aa		11.43	□□□□□ -0.58
DDX3X-222	ENST00000631641	HSP90AB2P	Q58FF8	381 aa		11.42	□□□□□ -0.58
DDX3X-222	ENST00000631641	USHBP1	Q8N6Y0	703 aa		11.42	□□□□□ -0.58
DDX3X-222	ENST00000631641	CARD14	Q9BXL6	1004 aa		11.42	□□□□□ -0.58
DDX3X-222	ENST00000631641	NSD2	O96028	1365 aa		11.41	□□□□□ -0.58
DDX3X-222	ENST00000631641	PCDH11X	Q9BZA7	1347 aa		11.41	□□□□□ -0.58
DDX3X-222	ENST00000631641	PCDH11Y	Q9BZA8	1340 aa		11.41	□□□□□ -0.58
DDX3X-222	ENST00000631641	YY1	P25490	414 aa		11.41	□□□□□ -0.58
DDX3X-222	ENST00000631641	AKT1S1	Q96B36	256 aa		11.41	□□□□□ -0.58
DDX3X-222	ENST00000631641	SGIP1	Q9BQI5	828 aa		11.41	□□□□□ -0.58
DDX3X-222	ENST00000631641	KIF20B	Q96Q89	1820 aa		11.4	□□□□□ -0.58
DDX3X-222	ENST00000631641	HMGB2	P26583	209 aa	Known RBP	11.4	□□□□□ -0.58
DDX3X-222	ENST00000631641	SLC16A10	Q8TF71	515 aa		11.4	□□□□□ -0.58
DDX3X-222	ENST00000631641	ARX	Q96QS3	562 aa		11.4	□□□□□ -0.58
DDX3X-222	ENST00000631641	FHDC1	Q9C0D6	1143 aa	Predicted RBP	11.4	□□□□□ -0.58
DDX3X-222	ENST00000631641	EMILIN1	Q9Y6C2	1016 aa		11.4	□□□□□ -0.58
DDX3X-222	ENST00000631641	DOT1L	Q8TEK3	1739 aa		11.39	□□□□□ -0.59
DDX3X-222	ENST00000631641	TFCP2L1	Q9NZI6	479 aa		11.39	□□□□□ -0.59
DDX3X-222	ENST00000631641	CCNL1	Q9UK58	526 aa	Predicted RBP	11.39	□□□□□ -0.59
DDX3X-222	ENST00000631641	UTRN	P46939	3433 aa		11.39	□□□□□ -0.59
DDX3X-222	ENST00000631641	MAP3K5	Q99683	1374 aa		11.39	□□□□□ -0.59
DDX3X-222	ENST00000631641	PPM1G	O15355	546 aa	Predicted RBP	11.38	□□□□□ -0.59
DDX3X-222	ENST00000631641	POLD1	P28340	1107 aa		11.38	□□□□□ -0.59
DDX3X-222	ENST00000631641	SYT17	Q9BSW7	474 aa		11.38	□□□□□ -0.59
DDX3X-222	ENST00000631641	SHANK3	Q9BYB0	1731 aa		11.38	□□□□□ -0.59
DDX3X-222	ENST00000631641	PNPLA7	Q6ZV29	1317 aa		11.37	□□□□□ -0.59
DDX3X-222	ENST00000631641	NCAPD2	Q15021	1401 aa		11.37	□□□□□ -0.59
DDX3X-222	ENST00000631641	POLR3GL	Q9BT43	218 aa		11.37	□□□□□ -0.59
DDX3X-222	ENST00000631641	CYP27B1	O15528	508 aa		11.36	□□□□□ -0.59
DDX3X-222	ENST00000631641	KCNQ4	P56696	695 aa		11.36	□□□□□ -0.59
DDX3X-222	ENST00000631641	SPG7	Q9UQ90	795 aa		11.36	□□□□□ -0.59
DDX3X-222	ENST00000631641	RGPD2	P0DJD1	1756 aa		11.36	□□□□□ -0.59
DDX3X-222	ENST00000631641	GOLGB1	Q14789	3259 aa	Known RBP	11.36	□□□□□ -0.59
DDX3X-222	ENST00000631641	BCLAF1	Q9NYF8	920 aa	Known RBP eCLIP	11.35	□□□□□ -0.59	2e-8	■□□□□ 10.1
DDX3X-222	ENST00000631641	PALLD	Q8WX93	1383 aa		11.35	□□□□□ -0.59
DDX3X-222	ENST00000631641	PLEKHG2	Q9H7P9	1386 aa		11.35	□□□□□ -0.59
DDX3X-222	ENST00000631641	ANKRD26	Q9UPS8	1709 aa		11.35	□□□□□ -0.59
DDX3X-222	ENST00000631641	DDX10	Q13206	875 aa	Known RBP	11.34	□□□□□ -0.59
DDX3X-222	ENST00000631641	NKX1-1	Q15270	411 aa	Predicted RBP	11.34	□□□□□ -0.59
DDX3X-222	ENST00000631641	MPRIP	Q6WCQ1	1025 aa		11.34	□□□□□ -0.59
DDX3X-222	ENST00000631641	SMARCC1	Q92922	1105 aa	Predicted RBP	11.34	□□□□□ -0.59
DDX3X-222	ENST00000631641	POLK	Q9UBT6	870 aa		11.34	□□□□□ -0.59
DDX3X-222	ENST00000631641	LY75	O60449	1722 aa		11.34	□□□□□ -0.59
DDX3X-222	ENST00000631641	QSER1	Q2KHR3	1735 aa		11.34	□□□□□ -0.59
DDX3X-222	ENST00000631641	KAT6B	Q8WYB5	2073 aa		11.33	□□□□□ -0.6
DDX3X-222	ENST00000631641	FLAD1	Q8NFF5	587 aa		11.33	□□□□□ -0.6
DDX3X-222	ENST00000631641	EYA1	Q99502	592 aa		11.33	□□□□□ -0.6
DDX3X-222	ENST00000631641	PKD1L3	Q7Z443	1732 aa		11.32	□□□□□ -0.6
DDX3X-222	ENST00000631641	MSH5	O43196	834 aa		11.32	□□□□□ -0.6
DDX3X-222	ENST00000631641	TNNT2	P45379	298 aa	Predicted RBP	11.32	□□□□□ -0.6
DDX3X-222	ENST00000631641	PANK3	Q9H999	370 aa		11.32	□□□□□ -0.6
DDX3X-222	ENST00000631641	EIF4A2	Q14240	407 aa	Known RBP	11.31	□□□□□ -0.6
DDX3X-222	ENST00000631641	IFNL2	Q8IZJ0	200 aa		11.31	□□□□□ -0.6
DDX3X-222	ENST00000631641	KLHL34	Q8N239	644 aa		11.31	□□□□□ -0.6
DDX3X-222	ENST00000631641	TMOD3	Q9NYL9	352 aa		11.31	□□□□□ -0.6
DDX3X-222	ENST00000631641	COL23A1	Q86Y22	540 aa	Predicted RBP	11.3	□□□□□ -0.6
DDX3X-222	ENST00000631641	PIGB	Q92521	554 aa		11.3	□□□□□ -0.6
DDX3X-222	ENST00000631641	AK7	Q96M32	723 aa		11.3	□□□□□ -0.6
DDX3X-222	ENST00000631641	IGSF1	Q8N6C5	1336 aa		11.3	□□□□□ -0.6
DDX3X-222	ENST00000631641	PHKG2	P15735	406 aa		11.29	□□□□□ -0.6
DDX3X-222	ENST00000631641	GPR162	Q16538	588 aa		11.29	□□□□□ -0.6
DDX3X-222	ENST00000631641	DIEXF	Q68CQ4	756 aa	Known RBP	11.29	□□□□□ -0.6
DDX3X-222	ENST00000631641	TOGARAM1	Q9Y4F4	1720 aa		11.29	□□□□□ -0.6
DDX3X-222	ENST00000631641	LOC102724428	A0A0B4J2F2	783 aa		11.28	□□□□□ -0.6
DDX3X-222	ENST00000631641	HSP90AB1	P08238	724 aa	Known RBP	11.28	□□□□□ -0.6
DDX3X-222	ENST00000631641	SIK1	P57059	783 aa		11.28	□□□□□ -0.6
DDX3X-222	ENST00000631641	MORC1	Q86VD1	984 aa		11.28	□□□□□ -0.6
DDX3X-222	ENST00000631641	KNSTRN	Q9Y448	316 aa		11.28	□□□□□ -0.6
DDX3X-222	ENST00000631641	COL24A1	Q17RW2	1714 aa		11.28	□□□□□ -0.6
DDX3X-222	ENST00000631641	TUBGCP6	Q96RT7	1819 aa		11.28	□□□□□ -0.6
DDX3X-222	ENST00000631641	C5	P01031	1676 aa		11.27	□□□□□ -0.6
DDX3X-222	ENST00000631641	PER1	O15534	1290 aa	Predicted RBP	11.27	□□□□□ -0.61
DDX3X-222	ENST00000631641	MSL1	Q68DK7	614 aa		11.27	□□□□□ -0.61
DDX3X-222	ENST00000631641	RPL17-C18orf32	A0A0A6YYL6	228 aa	Known RBP	11.26	□□□□□ -0.61
DDX3X-222	ENST00000631641	SSFA2	P28290	1259 aa		11.26	□□□□□ -0.61
DDX3X-222	ENST00000631641	AMOT	Q4VCS5	1084 aa		11.26	□□□□□ -0.61
DDX3X-222	ENST00000631641	PLEKHO1	Q53GL0	409 aa	Predicted RBP	11.26	□□□□□ -0.61
DDX3X-222	ENST00000631641	PELP1	Q8IZL8	1130 aa	Known RBP	11.26	□□□□□ -0.61
DDX3X-222	ENST00000631641	ZNF784	Q8NCA9	323 aa	Predicted RBP	11.26	□□□□□ -0.61
DDX3X-222	ENST00000631641	NLGN2	Q8NFZ4	835 aa		11.26	□□□□□ -0.61
DDX3X-222	ENST00000631641	DCAF5	Q96JK2	942 aa		11.26	□□□□□ -0.61
DDX3X-222	ENST00000631641	C4B	P0C0L5	1744 aa		11.26	□□□□□ -0.61
DDX3X-222	ENST00000631641	ERVV-2	B6SEH9	535 aa		11.25	□□□□□ -0.61
DDX3X-222	ENST00000631641	PHF14	O94880	888 aa		11.25	□□□□□ -0.61
DDX3X-222	ENST00000631641	LINC00116	Q8NCU8	138 aa		11.25	□□□□□ -0.61
DDX3X-222	ENST00000631641	ASAP1	Q9ULH1	1129 aa		11.25	□□□□□ -0.61

Retrieved 100 of 20,778 RNA–protein pairs in 31.7 ms