RNA–Protein interactions for RNA: ENST00000627179.1

LINC01338-201, Transcript of long intergenic non-protein coding RNA 1338, humanhuman

TSL 3 BASIC

Gene LINC01338, Length 632 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC01338-201ENST00000627179 GPC1P35052 558 aa9.79□□□□□ -0.84
LINC01338-201ENST00000627179 LYSMD3Q7Z3D4 306 aa9.79□□□□□ -0.84
LINC01338-201ENST00000627179 GPR161Q8N6U8 529 aaKnown RBP9.79□□□□□ -0.84
LINC01338-201ENST00000627179 SV2AQ7L0J3 742 aa9.77□□□□□ -0.85
LINC01338-201ENST00000627179 SENP3-EIF4A1A0A087X0R7 540 aa9.76□□□□□ -0.85
LINC01338-201ENST00000627179 PCDHB11Q9Y5F2 797 aa9.76□□□□□ -0.85
LINC01338-201ENST00000627179 A0A1W2PRU2 124 aa9.75□□□□□ -0.85
LINC01338-201ENST00000627179 CYP2U1Q7Z449 544 aa9.75□□□□□ -0.85
LINC01338-201ENST00000627179 VWA5B2Q8N398 1253 aa9.75□□□□□ -0.85
LINC01338-201ENST00000627179 ESF1Q9H501 851 aaKnown RBP9.75□□□□□ -0.85
LINC01338-201ENST00000627179 CEP126Q9P2H0 1117 aa9.75□□□□□ -0.85
LINC01338-201ENST00000627179 KRT76Q01546 638 aa9.74□□□□□ -0.85
LINC01338-201ENST00000627179 CNTNAP3BQ96NU0 1288 aa9.74□□□□□ -0.85
LINC01338-201ENST00000627179 COL25A1Q9BXS0 654 aaPredicted RBP9.74□□□□□ -0.85
LINC01338-201ENST00000627179 CNTNAP3Q9BZ76 1288 aa9.74□□□□□ -0.85
LINC01338-201ENST00000627179 MEN1O00255 615 aa9.73□□□□□ -0.85
LINC01338-201ENST00000627179 TRAK2O60296 914 aa9.73□□□□□ -0.85
LINC01338-201ENST00000627179 PRICKLE2Q7Z3G6 844 aa9.73□□□□□ -0.85
LINC01338-201ENST00000627179 TBC1D2BQ9UPU7 963 aa9.73□□□□□ -0.85
LINC01338-201ENST00000627179 CDC14CA4D256 554 aa9.72□□□□□ -0.85
LINC01338-201ENST00000627179 SCTRP47872 440 aa9.72□□□□□ -0.85
LINC01338-201ENST00000627179 EIF4G2P78344 907 aaKnown RBP eCLIP9.72□□□□□ -0.85
LINC01338-201ENST00000627179 CLN3Q13286 438 aa9.72□□□□□ -0.85
LINC01338-201ENST00000627179 NLRP3Q96P20 1036 aa9.72□□□□□ -0.85
LINC01338-201ENST00000627179 OSBPL3Q9H4L5 887 aa9.72□□□□□ -0.85
LINC01338-201ENST00000627179 ZCCHC6Q5VYS8 1495 aaKnown RBP9.72□□□□□ -0.85
LINC01338-201ENST00000627179 GMCL1Q96IK5 515 aa9.71□□□□□ -0.86
LINC01338-201ENST00000627179 GRIP2Q9C0E4 1043 aa9.7□□□□□ -0.86
LINC01338-201ENST00000627179 GNRH1P01148 92 aa9.69□□□□□ -0.86
LINC01338-201ENST00000627179 RHOQP17081 205 aa9.69□□□□□ -0.86
LINC01338-201ENST00000627179 IRF5Q13568 498 aa9.69□□□□□ -0.86
LINC01338-201ENST00000627179 SLC27A3Q5K4L6 730 aa9.69□□□□□ -0.86
LINC01338-201ENST00000627179 RNFT1Q5M7Z0 435 aa9.69□□□□□ -0.86
LINC01338-201ENST00000627179 MYCP01106 439 aaPredicted RBP9.68□□□□□ -0.86
LINC01338-201ENST00000627179 WDR44Q5JSH3 913 aa9.68□□□□□ -0.86
LINC01338-201ENST00000627179 DYRK1BQ9Y463 629 aa9.68□□□□□ -0.86
LINC01338-201ENST00000627179 SPATA31C2B4DYI2 1134 aa9.67□□□□□ -0.86
LINC01338-201ENST00000627179 SLURP2P0DP57 97 aa9.67□□□□□ -0.86
LINC01338-201ENST00000627179 TRIM22Q8IYM9 498 aa9.67□□□□□ -0.86
LINC01338-201ENST00000627179 PHTF2Q8N3S3 785 aa9.67□□□□□ -0.86
LINC01338-201ENST00000627179 CCDC85AQ96PX6 553 aaPredicted RBP9.67□□□□□ -0.86
LINC01338-201ENST00000627179 ARHGEF10LQ9HCE6 1279 aa9.67□□□□□ -0.86
LINC01338-201ENST00000627179 POU4F2Q12837 409 aa9.66□□□□□ -0.86
LINC01338-201ENST00000627179 CDCA7Q9BWT1 371 aaPredicted RBP9.66□□□□□ -0.86
LINC01338-201ENST00000627179 CUEDC1Q9NWM3 386 aaPredicted RBP9.66□□□□□ -0.86
LINC01338-201ENST00000627179 USP4Q13107 963 aa9.65□□□□□ -0.86
LINC01338-201ENST00000627179 WASHC4Q2M389 1173 aa9.65□□□□□ -0.86
LINC01338-201ENST00000627179 NBPF10Q6P3W6 841 aaKnown RBP9.65□□□□□ -0.86
LINC01338-201ENST00000627179 NBPF15Q8N660 670 aa9.65□□□□□ -0.86
LINC01338-201ENST00000627179 ESYT1Q9BSJ8 1104 aa9.65□□□□□ -0.86
LINC01338-201ENST00000627179 H7C1W4 665 aa9.64□□□□□ -0.87
LINC01338-201ENST00000627179 SLFNL1Q499Z3 407 aa9.64□□□□□ -0.87
LINC01338-201ENST00000627179 FOXR1Q6PIV2 292 aa9.64□□□□□ -0.87
LINC01338-201ENST00000627179 CNKSR1Q969H4 720 aa9.64□□□□□ -0.87
LINC01338-201ENST00000627179 GDPD2Q9HCC8 539 aa9.64□□□□□ -0.87
LINC01338-201ENST00000627179 PRKCSHP14314 528 aaPredicted RBP9.63□□□□□ -0.87
LINC01338-201ENST00000627179 CENPCQ03188 943 aa9.63□□□□□ -0.87
LINC01338-201ENST00000627179 ZNF385CQ66K41 422 aaPredicted RBP9.63□□□□□ -0.87
LINC01338-201ENST00000627179 SIRT1Q96EB6 747 aa9.63□□□□□ -0.87
LINC01338-201ENST00000627179 XAGE2Q96GT9 111 aa9.63□□□□□ -0.87
LINC01338-201ENST00000627179 CHIC2Q9UKJ5 165 aa9.63□□□□□ -0.87
LINC01338-201ENST00000627179 DOLKQ9UPQ8 538 aa9.63□□□□□ -0.87
LINC01338-201ENST00000627179 SRSF11Q05519 484 aaKnown RBP9.62□□□□□ -0.87
LINC01338-201ENST00000627179 VAC14Q08AM6 782 aa9.62□□□□□ -0.87
LINC01338-201ENST00000627179 DBN1Q16643 649 aa9.62□□□□□ -0.87
LINC01338-201ENST00000627179 ESCO1Q5FWF5 840 aa9.62□□□□□ -0.87
LINC01338-201ENST00000627179 RIPOR1Q6ZS17 1223 aa9.62□□□□□ -0.87
LINC01338-201ENST00000627179 TAS1R3Q7RTX0 852 aa9.62□□□□□ -0.87
LINC01338-201ENST00000627179 RNF135Q8IUD6 432 aa9.62□□□□□ -0.87
LINC01338-201ENST00000627179 ZNF837Q96EG3 531 aaPredicted RBP9.62□□□□□ -0.87
LINC01338-201ENST00000627179 WASLO00401 505 aaPredicted RBP9.61□□□□□ -0.87
LINC01338-201ENST00000627179 IL2RAP01589 272 aa9.61□□□□□ -0.87
LINC01338-201ENST00000627179 SOX11P35716 441 aa9.61□□□□□ -0.87
LINC01338-201ENST00000627179 ABL2P42684 1182 aa9.61□□□□□ -0.87
LINC01338-201ENST00000627179 KCNMA1Q12791 1236 aa9.61□□□□□ -0.87
LINC01338-201ENST00000627179 TSGA10IPQ3SY00 556 aa9.61□□□□□ -0.87
LINC01338-201ENST00000627179 TIMMDC1Q9NPL8 285 aa9.61□□□□□ -0.87
LINC01338-201ENST00000627179 RAB6BQ9NRW1 208 aa9.61□□□□□ -0.87
LINC01338-201ENST00000627179 ADAMTS8Q9UP79 889 aa9.61□□□□□ -0.87
LINC01338-201ENST00000627179 HRH3Q9Y5N1 445 aa9.61□□□□□ -0.87
LINC01338-201ENST00000627179 GAS6Q14393 721 aa9.6□□□□□ -0.87
LINC01338-201ENST00000627179 MCM6Q14566 821 aa9.6□□□□□ -0.87
LINC01338-201ENST00000627179 SVOPQ8N4V2 548 aa9.6□□□□□ -0.87
LINC01338-201ENST00000627179 GAS2L1Q99501 681 aaPredicted RBP9.6□□□□□ -0.87
LINC01338-201ENST00000627179 ADAMTS2O95450 1211 aa9.59□□□□□ -0.87
LINC01338-201ENST00000627179 F11P03951 625 aa9.59□□□□□ -0.87
LINC01338-201ENST00000627179 MAP7D1Q3KQU3 841 aa9.59□□□□□ -0.87
LINC01338-201ENST00000627179 ZSCAN10Q96SZ4 725 aaPredicted RBP9.59□□□□□ -0.87
LINC01338-201ENST00000627179 DCAF1Q9Y4B6 1507 aa9.58□□□□□ -0.88
LINC01338-201ENST00000627179 ARHGEF15O94989 841 aa9.58□□□□□ -0.88
LINC01338-201ENST00000627179 GTF2E1P29083 439 aaPredicted RBP9.58□□□□□ -0.88
LINC01338-201ENST00000627179 SEMA3FQ13275 785 aa9.58□□□□□ -0.88
LINC01338-201ENST00000627179 MBIPQ9NS73 344 aa9.58□□□□□ -0.88
LINC01338-201ENST00000627179 RNF225M0QZC1 329 aaPredicted RBP9.57□□□□□ -0.88
LINC01338-201ENST00000627179 WHAMMQ8TF30 809 aa9.57□□□□□ -0.88
LINC01338-201ENST00000627179 TRERF1Q96PN7 1200 aa9.57□□□□□ -0.88
LINC01338-201ENST00000627179 FHDC1Q9C0D6 1143 aaPredicted RBP9.57□□□□□ -0.88
LINC01338-201ENST00000627179 OXLD1Q5BKU9 147 aa9.56□□□□□ -0.88
LINC01338-201ENST00000627179 GNASQ5JWF2 1037 aa9.56□□□□□ -0.88
LINC01338-201ENST00000627179 A0A1B0GTH6 734 aa9.55□□□□□ -0.88
Retrieved 100 of 20,778 RNA–protein pairs in 7.7 ms