RNA–Protein interactions for RNA: ENST00000626716.1

R3HDM4-208, Transcript of R3H domain containing 4, humanhuman

TSL 5 BASIC

Gene R3HDM4, Length 138 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
R3HDM4-208ENST00000626716 SYT17Q9BSW7 474 aa35.23■■■■□ 3.23
R3HDM4-208ENST00000626716 FHDC1Q9C0D6 1143 aaPredicted RBP35.23■■■■□ 3.23
R3HDM4-208ENST00000626716 AKT1S1Q96B36 256 aa35.21■■■■□ 3.23
R3HDM4-208ENST00000626716 MEGF6O75095 1541 aa35.21■■■■□ 3.23
R3HDM4-208ENST00000626716 CGNL1Q0VF96 1302 aa35.19■■■■□ 3.22
R3HDM4-208ENST00000626716 ARXQ96QS3 562 aa35.18■■■■□ 3.22
R3HDM4-208ENST00000626716 SHANK3Q9BYB0 1731 aa35.18■■■■□ 3.22
R3HDM4-208ENST00000626716 SMG6Q86US8 1419 aaKnown RBP35.17■■■■□ 3.22
R3HDM4-208ENST00000626716 USHBP1Q8N6Y0 703 aa35.17■■■■□ 3.22
R3HDM4-208ENST00000626716 RAPGEF4Q8WZA2 1011 aa35.17■■■■□ 3.22
R3HDM4-208ENST00000626716 HSP90AB2PQ58FF8 381 aa35.16■■■■□ 3.22
R3HDM4-208ENST00000626716 TIMELESSQ9UNS1 1208 aa35.16■■■■□ 3.22
R3HDM4-208ENST00000626716 DOT1LQ8TEK3 1739 aa35.15■■■■□ 3.22
R3HDM4-208ENST00000626716 SLC16A10Q8TF71 515 aa35.15■■■■□ 3.22
R3HDM4-208ENST00000626716 KIF20BQ96Q89 1820 aa35.15■■■■□ 3.22
R3HDM4-208ENST00000626716 INSRP06213 1382 aa35.14■■■■□ 3.22
R3HDM4-208ENST00000626716 KCNQ4P56696 695 aa35.14■■■■□ 3.22
R3HDM4-208ENST00000626716 CARD14Q9BXL6 1004 aa35.14■■■■□ 3.22
R3HDM4-208ENST00000626716 NSD2O96028 1365 aa35.13■■■■□ 3.21
R3HDM4-208ENST00000626716 TATP17735 454 aaPredicted RBP35.13■■■■□ 3.21
R3HDM4-208ENST00000626716 KIF24Q5T7B8 1368 aa35.13■■■■□ 3.21
R3HDM4-208ENST00000626716 TFCP2L1Q9NZI6 479 aa35.12■■■■□ 3.21
R3HDM4-208ENST00000626716 FLT4P35916 1363 aa35.12■■■■□ 3.21
R3HDM4-208ENST00000626716 UTRNP46939 3433 aa35.11■■■■□ 3.21
R3HDM4-208ENST00000626716 QSER1Q2KHR3 1735 aa35.1■■■■□ 3.21
R3HDM4-208ENST00000626716 LY75O60449 1722 aa35.09■■■■□ 3.21
R3HDM4-208ENST00000626716 PNPLA7Q6ZV29 1317 aa35.09■■■■□ 3.21
R3HDM4-208ENST00000626716 CCNL1Q9UK58 526 aaPredicted RBP35.07■■■■□ 3.2
R3HDM4-208ENST00000626716 MAP3K5Q99683 1374 aa35.06■■■■□ 3.2
R3HDM4-208ENST00000626716 NSD3Q9BZ95 1437 aa35.06■■■■□ 3.2
R3HDM4-208ENST00000626716 POLD1P28340 1107 aa35.04■■■■□ 3.2
R3HDM4-208ENST00000626716 EMILIN1Q9Y6C2 1016 aa35.04■■■■□ 3.2
R3HDM4-208ENST00000626716 PCDH11XQ9BZA7 1347 aa35.04■■■■□ 3.2
R3HDM4-208ENST00000626716 PCDH11YQ9BZA8 1340 aa35.04■■■■□ 3.2
R3HDM4-208ENST00000626716 TUBGCP6Q96RT7 1819 aa35.02■■■■□ 3.2
R3HDM4-208ENST00000626716 CLSPNQ9HAW4 1339 aa35.01■■■■□ 3.19
R3HDM4-208ENST00000626716 PPM1GO15355 546 aaPredicted RBP34.99■■■■□ 3.19
R3HDM4-208ENST00000626716 COL24A1Q17RW2 1714 aa34.98■■■■□ 3.19
R3HDM4-208ENST00000626716 CYP27B1O15528 508 aa34.98■■■■□ 3.19
R3HDM4-208ENST00000626716 PCGF6Q9BYE7 350 aa34.98■■■■□ 3.19
R3HDM4-208ENST00000626716 CHD4Q14839 1912 aa34.96■■■■□ 3.19
R3HDM4-208ENST00000626716 HMGB2P26583 209 aaKnown RBP34.95■■■■□ 3.19
R3HDM4-208ENST00000626716 MPRIPQ6WCQ1 1025 aa34.95■■■■□ 3.19
R3HDM4-208ENST00000626716 KLHL34Q8N239 644 aa34.95■■■■□ 3.19
R3HDM4-208ENST00000626716 MSH5O43196 834 aa34.94■■■■□ 3.18
R3HDM4-208ENST00000626716 WASHC2AQ641Q2 1341 aa34.94■■■■□ 3.18
R3HDM4-208ENST00000626716 MAP2P11137 1827 aaKnown RBP34.94■■■■□ 3.18
R3HDM4-208ENST00000626716 COL23A1Q86Y22 540 aaPredicted RBP34.93■■■■□ 3.18
R3HDM4-208ENST00000626716 GPR162Q16538 588 aa34.92■■■■□ 3.18
R3HDM4-208ENST00000626716 ZNF784Q8NCA9 323 aaPredicted RBP34.91■■■■□ 3.18
R3HDM4-208ENST00000626716 POLR3GLQ9BT43 218 aa34.9■■■■□ 3.18
R3HDM4-208ENST00000626716 PALLDQ8WX93 1383 aa34.89■■■■□ 3.18
R3HDM4-208ENST00000626716 SPG7Q9UQ90 795 aa34.89■■■■□ 3.18
R3HDM4-208ENST00000626716 NCAPD2Q15021 1401 aa34.89■■■■□ 3.18
R3HDM4-208ENST00000626716 EYA1Q99502 592 aa34.88■■■■□ 3.17
R3HDM4-208ENST00000626716 POLKQ9UBT6 870 aa34.88■■■■□ 3.17
R3HDM4-208ENST00000626716 ITGB4P16144 1822 aa34.88■■■■□ 3.17
R3HDM4-208ENST00000626716 ANKRD26Q9UPS8 1709 aa34.87■■■■□ 3.17
R3HDM4-208ENST00000626716 NKX1-1Q15270 411 aaPredicted RBP34.87■■■■□ 3.17
R3HDM4-208ENST00000626716 SMARCC1Q92922 1105 aaPredicted RBP34.87■■■■□ 3.17
R3HDM4-208ENST00000626716 PKD1L3Q7Z443 1732 aa34.86■■■■□ 3.17
R3HDM4-208ENST00000626716 C5P01031 1676 aa34.86■■■■□ 3.17
R3HDM4-208ENST00000626716 FLAD1Q8NFF5 587 aa34.85■■■■□ 3.17
R3HDM4-208ENST00000626716 PIGBQ92521 554 aa34.84■■■■□ 3.17
R3HDM4-208ENST00000626716 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP34.84■■■■□ 3.17
R3HDM4-208ENST00000626716 GOLGB1Q14789 3259 aaKnown RBP34.84■■■■□ 3.17
R3HDM4-208ENST00000626716 TAF1LQ8IZX4 1826 aa34.83■■■■□ 3.17
R3HDM4-208ENST00000626716 TOGARAM1Q9Y4F4 1720 aa34.83■■■■□ 3.17
R3HDM4-208ENST00000626716 NLGN2Q8NFZ4 835 aa34.82■■■■□ 3.16
R3HDM4-208ENST00000626716 EIF4G2P78344 907 aaKnown RBP eCLIP34.81■■■■□ 3.16
R3HDM4-208ENST00000626716 TNNT2P45379 298 aaPredicted RBP34.8■■■■□ 3.16
R3HDM4-208ENST00000626716 MSL1Q68DK7 614 aa34.8■■■■□ 3.16
R3HDM4-208ENST00000626716 PELP1Q8IZL8 1130 aaKnown RBP34.8■■■■□ 3.16
R3HDM4-208ENST00000626716 EIF4A2Q14240 407 aaKnown RBP34.77■■■■□ 3.16
R3HDM4-208ENST00000626716 HSPA5P11021 654 aaKnown RBP34.76■■■■□ 3.16
R3HDM4-208ENST00000626716 IFNL2Q8IZJ0 200 aa34.76■■■■□ 3.16
R3HDM4-208ENST00000626716 AK7Q96M32 723 aa34.76■■■■□ 3.16
R3HDM4-208ENST00000626716 PANK3Q9H999 370 aa34.74■■■■□ 3.15
R3HDM4-208ENST00000626716 TMOD3Q9NYL9 352 aa34.74■■■■□ 3.15
R3HDM4-208ENST00000626716 C4BP0C0L5 1744 aa34.74■■■■□ 3.15
R3HDM4-208ENST00000626716 PHKG2P15735 406 aa34.73■■■■□ 3.15
R3HDM4-208ENST00000626716 LOC102724428A0A0B4J2F2 783 aa34.72■■■■□ 3.15
R3HDM4-208ENST00000626716 SIK1P57059 783 aa34.72■■■■□ 3.15
R3HDM4-208ENST00000626716 ASAP1Q9ULH1 1129 aa34.7■■■■□ 3.15
R3HDM4-208ENST00000626716 CD2APQ9Y5K6 639 aa34.69■■■■□ 3.14
R3HDM4-208ENST00000626716 GRIN3BO60391 1043 aa34.68■■■■□ 3.14
R3HDM4-208ENST00000626716 AMIGO3Q86WK7 504 aa34.68■■■■□ 3.14
R3HDM4-208ENST00000626716 UBR3Q6ZT12 1888 aa34.67■■■■□ 3.14
R3HDM4-208ENST00000626716 PLEKHG2Q9H7P9 1386 aa34.66■■■■□ 3.14
R3HDM4-208ENST00000626716 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP34.66■■■■□ 3.14
R3HDM4-208ENST00000626716 PHF14O94880 888 aa34.66■■■■□ 3.14
R3HDM4-208ENST00000626716 YBX3P16989 372 aaKnown RBP eCLIP34.66■■■■□ 3.14
R3HDM4-208ENST00000626716 LINC00116Q8NCU8 138 aa34.66■■■■□ 3.14
R3HDM4-208ENST00000626716 IGSF1Q8N6C5 1336 aa34.65■■■■□ 3.14
R3HDM4-208ENST00000626716 SMIM5Q71RC9 77 aa34.65■■■■□ 3.14
R3HDM4-208ENST00000626716 SSFA2P28290 1259 aa34.64■■■■□ 3.14
R3HDM4-208ENST00000626716 ATG3Q9NT62 314 aa34.64■■■■□ 3.14
R3HDM4-208ENST00000626716 ATP6V1AP38606 617 aa34.63■■■■□ 3.13
R3HDM4-208ENST00000626716 CCER1Q8TC90 406 aaPredicted RBP34.63■■■■□ 3.13
R3HDM4-208ENST00000626716 ITPK1Q13572 414 aa34.62■■■■□ 3.13
Retrieved 100 of 20,778 RNA–protein pairs in 416.4 ms