RNA–Protein interactions for RNA: ENST00000626028.1

SF1-220, Transcript of splicing factor 1, humanhuman

TSL 2 BASIC

Gene SF1, Length 704 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF1-220ENST00000626028 MORC1Q86VD1 984 aa30.55■■■□□ 2.48
SF1-220ENST00000626028 PKD1L3Q7Z443 1732 aa30.55■■■□□ 2.48
SF1-220ENST00000626028 PLEKHG2Q9H7P9 1386 aa30.54■■■□□ 2.48
SF1-220ENST00000626028 PER1O15534 1290 aaPredicted RBP30.53■■■□□ 2.48
SF1-220ENST00000626028 TATP17735 454 aaPredicted RBP30.53■■■□□ 2.48
SF1-220ENST00000626028 TNNT2P45379 298 aaPredicted RBP30.52■■■□□ 2.48
SF1-220ENST00000626028 DOT1LQ8TEK3 1739 aa30.51■■■□□ 2.47
SF1-220ENST00000626028 NBPF14Q5TI25 921 aa30.51■■■□□ 2.47
SF1-220ENST00000626028 DDX54Q8TDD1 881 aaKnown RBP30.51■■■□□ 2.47
SF1-220ENST00000626028 NPC1L1Q9UHC9 1359 aa30.51■■■□□ 2.47
SF1-220ENST00000626028 SRCAPQ6ZRS2 3230 aa30.51■■■□□ 2.47
SF1-220ENST00000626028 PTF1AQ7RTS3 328 aa30.49■■■□□ 2.47
SF1-220ENST00000626028 USHBP1Q8N6Y0 703 aa30.49■■■□□ 2.47
SF1-220ENST00000626028 LRP5O75197 1615 aa30.48■■■□□ 2.47
SF1-220ENST00000626028 PCDH11XQ9BZA7 1347 aa30.47■■■□□ 2.47
SF1-220ENST00000626028 PCDH11YQ9BZA8 1340 aa30.47■■■□□ 2.47
SF1-220ENST00000626028 KCNQ2O43526 872 aa30.47■■■□□ 2.47
SF1-220ENST00000626028 EYA1Q99502 592 aa30.46■■■□□ 2.47
SF1-220ENST00000626028 EIF4A2Q14240 407 aaKnown RBP30.45■■■□□ 2.47
SF1-220ENST00000626028 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP30.45■■■□□ 2.47
SF1-220ENST00000626028 ACSBG1Q96GR2 724 aa30.44■■■□□ 2.46
SF1-220ENST00000626028 PSDA5PKW4 1024 aaPredicted RBP30.42■■■□□ 2.46
SF1-220ENST00000626028 R3HDM1Q15032 1099 aaKnown RBP30.42■■■□□ 2.46
SF1-220ENST00000626028 IGSF1Q8N6C5 1336 aa30.42■■■□□ 2.46
SF1-220ENST00000626028 PROM2Q8N271 834 aa30.41■■■□□ 2.46
SF1-220ENST00000626028 SPG7Q9UQ90 795 aa30.41■■■□□ 2.46
SF1-220ENST00000626028 LY75O60449 1722 aa30.39■■■□□ 2.46
SF1-220ENST00000626028 ITGB4P16144 1822 aa30.39■■■□□ 2.46
SF1-220ENST00000626028 TXNRD1Q16881 649 aa30.39■■■□□ 2.46
SF1-220ENST00000626028 PRIM1P49642 420 aaKnown RBP30.36■■■□□ 2.45
SF1-220ENST00000626028 CYP27B1O15528 508 aa30.34■■■□□ 2.45
SF1-220ENST00000626028 NKX1-1Q15270 411 aaPredicted RBP30.34■■■□□ 2.45
SF1-220ENST00000626028 SLC27A3Q5K4L6 730 aa30.33■■■□□ 2.45
SF1-220ENST00000626028 PAPPAQ13219 1627 aa30.33■■■□□ 2.45
SF1-220ENST00000626028 CC2D1BQ5T0F9 858 aaKnown RBP30.32■■■□□ 2.44
SF1-220ENST00000626028 SYTL4Q96C24 671 aaPredicted RBP30.32■■■□□ 2.44
SF1-220ENST00000626028 TOGARAM1Q9Y4F4 1720 aa30.32■■■□□ 2.44
SF1-220ENST00000626028 MTHFSP49914 203 aa30.31■■■□□ 2.44
SF1-220ENST00000626028 CASZ1Q86V15 1759 aa30.3■■■□□ 2.44
SF1-220ENST00000626028 KDRP35968 1356 aa30.29■■■□□ 2.44
SF1-220ENST00000626028 HMGB2P26583 209 aaKnown RBP30.29■■■□□ 2.44
SF1-220ENST00000626028 QSER1Q2KHR3 1735 aa30.29■■■□□ 2.44
SF1-220ENST00000626028 IL13P35225 146 aa30.28■■■□□ 2.44
SF1-220ENST00000626028 IFNL2Q8IZJ0 200 aa30.28■■■□□ 2.44
SF1-220ENST00000626028 ANO8Q9HCE9 1232 aaPredicted RBP30.27■■■□□ 2.44
SF1-220ENST00000626028 STK32BQ9NY57 414 aa30.27■■■□□ 2.44
SF1-220ENST00000626028 AMOTQ4VCS5 1084 aa30.26■■■□□ 2.43
SF1-220ENST00000626028 SLC15A2Q16348 729 aa30.24■■■□□ 2.43
SF1-220ENST00000626028 PLEKHO1Q53GL0 409 aaPredicted RBP30.24■■■□□ 2.43
SF1-220ENST00000626028 PHKG2P15735 406 aa30.23■■■□□ 2.43
SF1-220ENST00000626028 HSP90AB1P08238 724 aaKnown RBP30.22■■■□□ 2.43
SF1-220ENST00000626028 TAF1LQ8IZX4 1826 aa30.21■■■□□ 2.43
SF1-220ENST00000626028 DIAPH1O60610 1272 aaKnown RBP30.2■■■□□ 2.43
SF1-220ENST00000626028 SULT6B1Q6IMI4 303 aa30.2■■■□□ 2.43
SF1-220ENST00000626028 LRRC4BQ9NT99 713 aa30.2■■■□□ 2.43
SF1-220ENST00000626028 SMARCC1Q92922 1105 aaPredicted RBP30.19■■■□□ 2.42
SF1-220ENST00000626028 MPRIPQ6WCQ1 1025 aa30.18■■■□□ 2.42
SF1-220ENST00000626028 COL3A1P02461 1466 aaPredicted RBP30.18■■■□□ 2.42
SF1-220ENST00000626028 C5P01031 1676 aa30.17■■■□□ 2.42
SF1-220ENST00000626028 AEBP1Q8IUX7 1158 aa30.17■■■□□ 2.42
SF1-220ENST00000626028 SPON1Q9HCB6 807 aa30.17■■■□□ 2.42
SF1-220ENST00000626028 DCAF5Q96JK2 942 aa30.16■■■□□ 2.42
SF1-220ENST00000626028 SCN11AQ9UI33 1791 aa30.15■■■□□ 2.42
SF1-220ENST00000626028 VIRMAQ69YN4 1812 aaKnown RBP30.15■■■□□ 2.42
SF1-220ENST00000626028 TUBGCP6Q96RT7 1819 aa30.15■■■□□ 2.42
SF1-220ENST00000626028 ERVV-2B6SEH9 535 aa30.14■■■□□ 2.42
SF1-220ENST00000626028 CCNL1Q9UK58 526 aaPredicted RBP30.14■■■□□ 2.42
SF1-220ENST00000626028 PALLDQ8WX93 1383 aa30.14■■■□□ 2.41
SF1-220ENST00000626028 ZNF530Q6P9A1 599 aaPredicted RBP30.13■■■□□ 2.41
SF1-220ENST00000626028 PIGBQ92521 554 aa30.13■■■□□ 2.41
SF1-220ENST00000626028 AKT1S1Q96B36 256 aa30.13■■■□□ 2.41
SF1-220ENST00000626028 TMOD3Q9NYL9 352 aa30.13■■■□□ 2.41
SF1-220ENST00000626028 ZNF831Q5JPB2 1677 aa30.12■■■□□ 2.41
SF1-220ENST00000626028 C1orf141Q5JVX7 400 aa30.12■■■□□ 2.41
SF1-220ENST00000626028 CFAP53Q96M91 514 aa30.12■■■□□ 2.41
SF1-220ENST00000626028 ZNF827Q17R98 1081 aa30.08■■■□□ 2.41
SF1-220ENST00000626028 ZEB1P37275 1124 aaPredicted RBP30.07■■■□□ 2.4
SF1-220ENST00000626028 COL24A1Q17RW2 1714 aa30.07■■■□□ 2.4
SF1-220ENST00000626028 KDM6AO15550 1401 aaPredicted RBP30.06■■■□□ 2.4
SF1-220ENST00000626028 CNGB1Q14028 1251 aaPredicted RBP30.06■■■□□ 2.4
SF1-220ENST00000626028 SLC16A10Q8TF71 515 aa30.06■■■□□ 2.4
SF1-220ENST00000626028 MTFR1LQ9H019 292 aa30.06■■■□□ 2.4
SF1-220ENST00000626028 PPP2R1AP30153 589 aa30.05■■■□□ 2.4
SF1-220ENST00000626028 PDGFDQ9GZP0 370 aaPredicted RBP30.05■■■□□ 2.4
SF1-220ENST00000626028 HMOX1P09601 288 aa30.04■■■□□ 2.4
SF1-220ENST00000626028 AKAP4Q5JQC9 854 aa30.04■■■□□ 2.4
SF1-220ENST00000626028 C4BP0C0L5 1744 aa30.04■■■□□ 2.4
SF1-220ENST00000626028 ADAMTS7Q9UKP4 1686 aa30.04■■■□□ 2.4
SF1-220ENST00000626028 KCNQ4P56696 695 aa30.03■■■□□ 2.4
SF1-220ENST00000626028 TFCP2L1Q9NZI6 479 aa30.03■■■□□ 2.4
SF1-220ENST00000626028 NUDCQ9Y266 331 aa30.02■■■□□ 2.4
SF1-220ENST00000626028 UBR3Q6ZT12 1888 aa30■■■□□ 2.39
SF1-220ENST00000626028 LOC102724428A0A0B4J2F2 783 aa30■■■□□ 2.39
SF1-220ENST00000626028 U2SURPO15042 1029 aaKnown RBP30■■■□□ 2.39
SF1-220ENST00000626028 SIK1P57059 783 aa30■■■□□ 2.39
SF1-220ENST00000626028 ATG3Q9NT62 314 aa30■■■□□ 2.39
SF1-220ENST00000626028 ASAP1Q9ULH1 1129 aa30■■■□□ 2.39
SF1-220ENST00000626028 PNPLA7Q6ZV29 1317 aa29.99■■■□□ 2.39
SF1-220ENST00000626028 ZBTB7AO95365 584 aa29.99■■■□□ 2.39
SF1-220ENST00000626028 CABP4P57796 275 aa29.99■■■□□ 2.39
Retrieved 100 of 20,778 RNA–protein pairs in 24.5 ms